Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <--------P             <---------MYB52(1)            --------->At5g28300           <---------MYB46(3)        --------->MYB52(1)    <-------PIF5    ------->PIF5<-------GAMYB   ===================MYC_MYB   --------->ANAC58                                                                       --------->AtMYB61   =====================MYC_MYB                                                          --------->MYB46(3)   --------->TGA1a                                                                      ------>NtERF2   <---------TGA1a                                                            --------->MYB52(2)   --------->ANAC58       <---------ZAT6                              ----------->HVH21--------->ANAC46  <-------TEIL  --------->At4g35610               <-----------------AGL1    <---------MYB52(1) ------>ANAC46 --------->MYB52(2)                 --------->ZAT6    <---------ICU4     <---------ALFIN1 ------>ANAC58 --------->MYB46(2)              <----------DOF2    <----------DOF2   ------>ZmHOX2a(2) ------>ANAC58 <---------MYB46(3)--------->AHL20(2)    <-----------RAV1(1) <-------GAMYB----------->RAV1(1)   aaggcacgtccaacggttagttgaaatagtgtcattttaaaaactgagactttcactatgtggcccttctttatgaccgttagtgatccccaccacaaac  19195600             <---------MYB52(2)            <---------At4g35610            --------->ZAT2            <---------ZAT2            --------->At4g35610                                               --------->DAG2           ------->TEIL                                                 <---------------AGL15        --------->ANAC46                                                --------------->AGL15     ----------->HVH21       ------->GAMYB                             ----------------->AGL3  -------->ATHB1          <---------ALFIN1           <---------ARR14(2)----------------->AGL2  --------->ATHB12   ------>NtERF2                   --------->ARR14(2)==============================  <---------ICU4     --------->LBD16          ------->GAMYB<----------DOF2   ---------->DOF2 <---------YAB1     --------->ANAC46         --------->MYB46(3)  <---------DAG2----------->GT1------- <---------ATHB12  <---------LBD16         --------->MYB52(1)    <----------DOF2              <------   tccatcattgacgcagctaactccggcacaactccctctataatccaacggtccaaatactctttcacttttctccaaataaagttatatttctaatcac  19195700                                                                             --------->GLK1(2)        --------->HSFB2a(2)                          <---------AHL20(2)     --------->ARR11(3)  <---------------AGL15                              <---------YAB1         <---------ARR11(3)  --------------->AGL15                          <----------DOF2            <---------GLK1(2) <-----------------AGL2                          <---------DAG2           <---------ATHB12 =================MADS_MADS                --------->ZAT18         ------->GAMYB<----------DOF2     < -->YAB1<---------HSFB2a(2)                <---------ZAT18        --------->MYB46(3)                < -----GT1                                  --------->ZAT14      --------->MYB52(1)          <--------   atttctatttctagattagaagacaattgagaaaacgactacaagttcacacttttttattgaatccaacggtccaaagattctttcacaaatactttga  19195800                                       <---------RVE1(1)                                      --------->ARR11(3)                                      --------->ARR14(2)                                      <---------ARR11(3)             --------->AHL20(2)     ----------->ARR10             <---------AHL20(2) --------->YAB1        --------->YAB1                     <----------DOF2            <---------ATHB12    -------->HAHB4  ------>MYB46(1)                    --------->DAG2  <---------ANAC58             --------->ICU4   ------>MYB83                      ---------->DOF2  <---------ANAC58             <---------YAB1 --------->DEAR3(1)            <---------AHL20(2) -----------GT1              --------->YAB1  <---------At4g35610           --------->AHL20(2) ---------AHL20(2)        <----------DOF2    --------->At4g35610         <---------ARR11(3) --DOF2   --------->WOX13(1)--------->ICU4 <-----------GT1               --------->ARR11(3)   atttacttgaatcaattaatctcacttgctataatgataagatattcacctccctcttataagataacaaaattagattttataaaaagtgcttaaacta  19195900                                                                  ----------------->AGL1                                                               <-----------GT1                                         <---------CCA1(2)   <---------ICU4                                         ---------->ID1      -------->HAHB4                                ------->GAMYB               <---------YAB1                               --------->MYB46(3)         --------->YAB1                               <---------MYB52(2)        <---------AHL20(2)                              <---------At4g35610        --------->AHL20(2)                              --------->At4g35610      --------->TOE2(3)                             --------->MYB52(1)        <----------DOF2                <---------MYB52(1)    <----------ID1        --------->ANAC58   <---------DAG2 <---------ATHB51         <-------GAMYB---  ---------->DOF2         --------->ANAC58   <----------DOF2--------->ICU4    ---------->DOF2--------   taaataaagacaaaactagtaactgagaaggcaacggacacttgtagctttatgcaactttaattattccctacatgagaaaaagaccgttgcgataata  19196000                                                                                         ============                     --------->HSFB2a(2)                                                 <----------DOF2                     <---------HSFB2a(2)                                           <---------ANAC58               ------------>CBF                                                    <---------ANAC58              --------->ANAC58                                                   <---------ARR11(3) ------->DOF2 --------->ANAC58     ----------->RAV1(1)                           --------->ARR11(3) < ->AHL20(2)   --------->ANAC46*TSS--------->MYB46(3)           --------->ZAT6 <---------TOE1(2)    --   taaagtcttcgttcacacacaatctcgaagaaaacaacaacagttttgatcactctgtctctcttactctatcttcttcccaagttcttgtcttttgatg  19196100                                                                       <---------ALFIN1                                                                      <------NtERF2                                                                     ------>NtERF2                                                                     <---------RAP2.6(3)                                                                    --------->RAP2.3(2)                                                                    --------->DEAR3(1)                             --------->GLK1(1)                      --------->RAP2.6(2)                         <------NtERF2                              <---------ATERF1(2)                       <---------DEAR3(1)                           --------->ANAC58                       <---------LBD16                   <-----------HVH21                       <---------ANAC46                 <---------ANAC55(2)                    =====================================bZIP_DOF   --------->ANAC58            -----                    --------->O2                  <---------ANAC58  --------->RAP2.3(3)         -----                    =====================================bZIP_DOF   --------->ANAC46            <----                    <---------O2                  <---------ANAC58 --------->ERF1<---------ANAC46            --------->HSFB2a(1)                <----------DOF2     --------->ATERF1(1)          <----            <---------HSFB2a(1)               <----------DOF2      --------->RAP2.3(1)    <------MYB83            --------->HSFC1(2)                <---------DAG2      <---------ATERF1(1) <---------ARR14(2)          <<<<<<<ZML2<-----------HVH21      ------>NtERF2--------->LBD16        <---------AtMYB61 =============================bZIP_DOF ----------->RAV1(2)        --------->At4g35610 --------->ARR14(2) ------NtERF2       <---------TGA1a --------->HSFC1(2)  <---------ANAC58      <----------DOF2  <----- ------->RAP2.6(2)  --------->TGA1a<---------ALFIN1     <---------ANAC58 <---------ALFIN1 <------MYB46(1)   gccgaaaccctagaaccctccctcgtcggggaaatcgacacttctgcgcctttcgagtccgtgagagaagccgccactcgctttggtggatttggtttct  19196200                          --------->HSFC1(2)                          <---------HSFB2a(1)                          --------->HSFB2a(1)           --------->TOE1(3)  --------->HSFB2a(1)     <---------HSFC1(2)  <---------HSFB2a(1)    <-----------ARR10 ---->HSFB2a(2)        --------->LBD16 ---->HSFC1(1)        --------->ANAC46                                                              < -----HSFB2a(2)  <---------ARR11(3)                              ----------------------->TaNAC69(2) < -----HSFC1(1)   --------->ARR11(3)       <-----------GT1  ---------->DOF2                      <---- ----LBD16 --------->TOE2(3)     <---------TOE1(2)------>ZmHOX2a(1)    <----------DOF2  ---------->ID1   ggaaaccttcttcccttaacatctccgaagcttctcaggtcttatttctctccttctccctcaaagtctctgtctttctcactgatttttgtccatttct  19196300                                                               --------->MYB52(2)                                                            <----------DOF2                        --                                                      ------>ZmHOX2a(2)                          <---                                                     <------ZmHOX2a(2)                           ----                                                    <---------AGP1               <---------YAB1  ----                                                    --------->ARR11(3)         <---------ICU4    <---                                                    <---------ARR11(3)         --------->YAB1    ----                                                    --------->ARR14(2)        --------->ICU4    <----                                                    <---------ARR14(2)        <---------YAB1    <---- <----------DOF2                                    --------->AGP1         <---------YAB1 <---------HSFB2a(1) ---------ANAC58                             --------->HSFB2a(2)       <---------ANAC58   --------->HSFC1(2) ---------ANAC58                             <---------HSFB2a(2)       <---------ANAC46   --------->HSFB2a(1) ------DOF2                       <-------TEIL    ----------->ARR10    <---------ANAC58   <---------HSFC1(2)   ttgcttttggggttttagttgaaatgggtttttagattcatcaatttctagatagatcttgtctttagttgtttcttgtgattatgatgcgaaatttcga  19196400        <---------HSFB2a(2)        --------->HSFB2a(2)    <---------ANAC58    <---------ANAC58    <-------GAMYB                                                                                 <--   <---------MYB46(3)                                                                             <-- ------->ATHB12                                                                                   --- ------ARR14(2)                                                                                   --- ----->ARR14(2)                                                  ---------->DOF2                  === --->TEIL                                                        ==================================== ------ARR11(1)                                             <---------WOX13(1) <----------DOF2    <-- ----->GLK1(2)          <---------AtMYB61                 --------->ATHB12     ====================== -----CCA1(2)       <------MYB83---------->DOF2          --------->ICU4 <------ZmHOX2a(1)         === -----ARR14(1)      <------MYB46(1)            <---------HSFB2a(2)     ----------->GT1 --------->ALFIN1   atctttggttgcagaacgaagttggtatggttttgaaagcgagtgagttagagaaggaactgattgagaaagaaggagaaactttgaaggtgttgaagtc  19196500  Previous    Next  AGI:  At3g51720.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48842.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 19196030    to: 19197613    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version