Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ANAC46       --------->DEAR3(1)      --------->ATERF1(1)      --------->RRTF1(1)      <------NtERF2      --------->RAP2.3(1)     <---------RAP2.3(1)     <---------ORA47(2)     <---------ATERF1(1)     <---------DEAR4(2)    <---------DEAR3(1)    <---------RRTF1(3)    <---------RAP2.3(2) --------->DAG2 --------->DOF2 -----NtERF2 ------ANAC46 --NtERF2          ----------->HVH21 ->NtERF2<-----------RAV1(2)                  <---------ALFIN1 -----LBD16       <---------ANAC46       <---------ARR11(1) ----RRTF1(1)    --------->At4g35610     <---------ARR14(2) >NtERF2 <------NtERF2                   --------->ARR14(2) ----RAP2.3(1)   <------NtERF2     <---------ALFIN1 ---DEAR3(1)     <---------At4g35610    <---------CCA1(2) ---RRTF1(2)    <---------MYB46(3)--------->ZAT18                                          <---------WOX13(1) ---RAP2.3(2)  --------->ALFIN1   <---------ZAT14          --------->At4g35610           --------->ATHB12 --At4g35610   <---------RAP2.6(2)<---------SPL7           <---------ZAT2                <---------ICU4 ->At4g35610 <---------O2  <---------------AtSPL8    <-----------HVH21                  --------->ICU4 --LBD16------>NtERF2      <---------------AtSPL3   <-----------RAV1(1)         --------->ANAC58 ---RAV1(1) <---------AtMYB61  --------->SPL7------>ZmHOX2a(1)        <---------ICU4    <---------YAB1 >RAV1(2)<----------CDC5---------->DOF2 <---------ARR14(1) <---------At4g35610  --------->ANAC58   cggaaagcggcgcagaggtggctgacaaaagagtaccgcaccgtatcctcacttctgtcgaagctgatgtaaacatcgctgcaatccaccatgattgttt  19136900                                                                                                    -                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                          ===========         <---------ANAC58       <-----------GT1                                           ---------->DOF2         <---------ANAC58     --------->GLK1(1)                                ----------->GT1   <---  <------NtERF2              <---------ARR14(2)                              --------->ICU4      ---- ------>NtERF2------->TEIL   --------->ARR14(2)                   <------ZmHOX2a(2) <---------ARR14(2)   aggcgcgtttttcttgcacctagatttaggggattttcagttttttttttttttttcatttagactggatcaagtcggaattagtgaattcgtaaagaga  19137000                                                                                              <------                                                                                              -------                                                                                        <------NtERF2 ------>TEIL                                                                           <---------ATERF1(1) ------ANAC55(2)                      -------->ZAP1                                    ------>NtERF2< ----->ANAC55(2)                    <---------WRKY18(1)                               --------->ATERF1(2) ------ANAC58                      --------->WRKY38(1)                                <---------RAP2.6(2) ------bZIP60(2)                   --------->WRKY12                                   --------->RAP2.6(2) ----->TGA1a                    --------->ALFIN1                                      <---------ATERF1(2) ------TGA1a                  <---------ANAC46                   <------------CBF    --------->ATERF1(1) ------ANAC58               <---------ZAT14                <---------ANAC58          --------->RAP2.6(3) ======bZIP_DOF           --------->REM1(2)                <---------ANAC46         ------>NtERF2   - ------O2               --------->LBD16                    <---------ANAC58         <---------ATERF1(1) ----->O2              <---------ANAC46                  --------->ARR11(3)     ------>ZmHOX2a(2)   <   cgtgcctcacgatgaagaagtcgttccgagtagagtgttgacctagtttttcttacaaatttcttggaattgtgttttttgatcgaggccggccaagttc  19137100       --------->ARR14(2)       <---------ARR14(2)      --------->HSFC1(2)      <---------HSFC1(2)      --------->HSFB2a(1)      <---------HSFB2a(1)         --------->AtMYB61 ---ARR11(3)                   <---------ALFIN1 -->ARR11(3)              <-----------GT1 ---------HSFB2a(2)     <-----------HVH21                      --------->YAB1          <---------AHL20(2) -------->HSFB2a(2)  <----------DOF2           --------->AHL20(2)      <---------TOE2(3)        ----- ---------LBD16--------->KAN4(2)  --------->TOE2(3)           <---------YAB1           --------->AHL20(2)   ttctcggaagtttcgcttattctctttgtcacaacacctcaacttgaacttaaataaaaccagaatgatagttaagttttatagtttgtttaattcgtag  19137200                                                                               <---------ANAC58                                    <---------ARR14(3)                  --------->ANAC58                                    --------->ARR14(3)                  --------->ANAC58                                    <---------ARR11(3)          <---------ANAC58             --------                                    <---------GLK1(2)           <---------ANAC58        <------------                                    --------->ARR11(3)        <---------MYB46(3)       ------->TEIL                                  --------->ICU4----------->GT1 <---------ANAC46      <---------CCA1(2)   <----------DOF2 <-----------------------TaNAC69(2)     <---------TOE2(3)    <---------ANAC46 ------->CBF<---------ANAC46   --------->WRKY18(1)        <---------TOE1(3)    <---------ANAC58   caattctttttgttttgtagatgagtagaacaggtcaagattttgaaaaatggtatctctaaggttgtttgtgcaagcatgtcgtcttgtatctcaaaag  19137300                                                                                      --------->At4g35610                                                                                     ----------->RAV1(1)                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                   --------->LBD16                                                                                   <------NtERF2                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                  --------->RRTF1(2)                                                                                  ----------->RAV1(1)                                                                                  --------->RAP2.3(2)                                                                                  --------->DEAR3(1)                                                                                 --------->RAP2.6(1)                                                                                 --------->RRTF1(1)                                                                                 --------->RAP2.3(1)                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                                <---------RAP2.3(1)                                                                                <---------ATERF1(1)                                                                               <---------ATERF1(2)                                                                               --------->ANAC46                                                         --------->LBD16       --------->DEAR3(1)                                                   ------>ZmHOX2a(1)           --------->ATERF1(2) -->DOF2         <-----------GT1       <------ZmHOX2a(1)<---------TOE1(1) <----------DOF2 -----AGL1--------->ATHB12             --------->ATERF1(1)     ---------->DOF2<---------RAP2.6(2) ---   gaaactcaagaacgatttgtttccaaacaaactccgatggaggaggcctcttcctcttccgaggtaaaagcacttcctttgccgccgcagcatcaagtgt  19137400                          <---------ARR14(2)                          --------->ARR14(2)                        --------->LBD16                       <---------ANAC58                       <---------ANAC58                       --------->HSFB2a(2)                       <---------ANAC46                       --------->MYB59                       --------->ANAC55(2)                  <---------MYB52(1)            --------->ANAC58                       <---------HSFB2a(2)                <---------MYB46(3)     <---------YAB1                       <---------ANAC55(2)           --------->ZAT14         <---------ARR11(3)                      <---------LBD16                <-------TEIL            --------->ARR11(3)   <--            <------ZmHOX2a(1)                        --------->ZAT18     <---------WRKY12 --------->ANAC58         <---------At4g35610    <----------DOF2      <---------ZAT14    --------->WRKY18(1)      <--- -------->GT1   ----------->ARR10   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------WRKY38(1)    <----   ttgtaaatttcagaggagaagagttgcggaacagctttgttagccatctcagaagtgcattggttaggcatggggtcaacatcttcatagacacgaatga  19137500                                                                                --------->ANAC46                                                                             <-------TEIL                                                                          <------MYB83                                                                          <------MYB46(1)            <----------DOF2                                              --------->MYB52(2)           --------->TOE1(3)                                             --------->MYB46(2)    ----------->GT1                                                      --------->MYB111(1)   --------->DAG2                                     <----------DOF2    --------->MYB59           <-  --------->DAG2             --------->LBD16     --------->ARR14(2)     <---------MYB55(1)       <--- ---------->DOF2            <---------HSFB2a(2)  <---------ARR14(2)    <---------MYB52(1)       <---- ----ZmHOX2a(1)    ------->MYC3  =========================HOX2a_HOX2a  <<<<<<<<<MYB98           <---- -------ID1--------->TOE2(3)--------->HSFB2a(2) <------ZmHOX2a(1) <-----------GT1               <---- -----TOE2(3)      <-------MYC3  <------ZmHOX2a(1) ------>ZmHOX2a(2)  <-------GAMYB            <-----   ggaaaaaggtaaacctttacatgtgtttttccagaggattgaagagtcgaggatcgctttggccattttttccgttaggtacaccgaatcgaaatggtgc  19137600                                                  <---------ICU4     --------->STY1(2)                           <---------ATHB12     <---------STY1(2)                           <---------YAB1 --------WRKY18(1)                       <---------At4g35610                    --------->ANAC46 -------DOF2                            --------->HSFB2a(1)             ---------->DOF2            -- -----ANAC58                            <---------HSFB2a(1)         ----------->GT1          -------- -----ANAC58              <---------AtLEC2    ------>ZmHOX2a(1) <---------REM1(2)       <------MYB83- -----ANAC46    <---------REM1(1)       ----------->ARR10      <---------HSFB2a(2)      <------MYB46(1) ----MYB46(3)--------->ICU4           ---------->DOF2          --------->HSFB2a(2)     --------->MYB59   ttgaacgagctagtgaagatgaaggaatgcatggacaagggaaagctcctcatcattcccattttctacaaggttaaagcatacgaagttcggtatcaga  19137700             <---------ANAC46         <-------GAMYB         <---------ANAC58         <---------ANAC58        <---------MYB46(3)        <------MYB83        <------MYB46(1)       <---------AtMYB61                                                                    <--------     <---------MYB52(1)                                     --------->ZAT14     <-------GAMYB<------ZmHOX2a(2)   <---------DEAR3(2)              --------->YAB1           <---------ZAT14<---------At4g35610   <---  <---------DEAR3(1)              --------->ICU4           <---------AtMYB61   <-----------RAV1(1) --------->HVH21             --------->ANAC46         <<<<<<<<<<<<<<<<<LFY --------->At4g35610------>ZmHOX2a(2) ->YAB1--------->MYB59      <---------LBD16     --------->ANAC58      <----------DOF2       --------- ----------->AtMYB77    --------->GLK1(2)       --------->ANAC58----------->HVH21      --------->MYB52(1)   agggacggtttggttgtgttttcaagaatttgcgcaatgttgatgttcacaagaaaaaccagtggtctgaagctttgagctctgttgcagaccggatcgg  19137800  Previous    Next  AGI:  At3g51560.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G17050.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68293.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:I Range:  from: 19132787    to: 19136892    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51570.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82909.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC Range:  from: 19137337    to: 19141435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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