Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->GT1                                                                                      <---------ANAC46                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                     <---------AHL20(2)            <---------CCA1(2)                                                     --------->AHL20(2)          <---------ANAC46                                                 --------->ATHB12                <---------ANAC58                                                <---------YAB1                   <---------ANAC58                     ---------->DOF2            <---------ATHB12                 --------->ANAC55(2)<               <---------ICU4                   --------->ICU4               <----------DOF2        <              --------->ICU4            <---------ZAT14                     --------->TOE2(3)  <-----         ----------->GT1  --------->ZAT18      <---------TOE2(3) ---------->DOF2 <---------ANAC55(2)<   ttgtagagaatgagtaaatattccaaagtggtctaggtctagtgaagttaatgatttaaaaatgcttcaaagttcaaacctttgcgtatcgtataactcg  19136500                                                                                                 ----                                                                                                -----                                                                                           ----------                                                                                         ------------                                                                                         --------->ANAC55(2)     <--------P            <---------ZAT14                        <---------GLK1(2)      <---------ANAC55(2) ---------ANAC58           --------->ZAT14                        --------->ARR14(2)     <---------ANAC46 ---------ANAC46           <---------ZAT18                        <---------ARR14(2)     <---------ANAC58 ----O2     <---------ZAT14--------->ZAT18          --------->DEAR3(1)                   <---------ANAC58 ---------ANAC58        ---------->DOF2<---------ATHB12         --------->LBD16         <------------   tggcctggtaagtctacagtttccaatagagcacttggccaatcgcttctaacatcgcccaaattccagatttgtttcttcataaacgatttcgtgactg  19136600                                         --------->SPL7                                       <---------SPL7                                      <---------ANAC58                                      <---------ANAC58                                    ------>NtERF2                                    <---------ATERF1(1)                                    --------->LBD16                                   --------->DEAR3(1)                                   <---------ATERF1(2)                    ----------->HVH21<------NtERF2                 --------->LBD16   <---------DEAR3(1)                --------->DEAR3(1) --------->RAP2.3(2)        ------>ZmHOX2a(1)             <---------ALFIN1      --------->ATERF1(2)    --------->ARR14(2)             --------->DEAR3(1)   --------->ORA47(2)      <---------ARR14(2)             --------->AtMYB61    --------->RAP2.3(1)    <---------At4g35610          --------->ARR14(2)      --------->ERF1         --------->At4g35610          <---------ARR14(2)      --------->ATERF1(1)    <---------ZAT2        ----------->TGA1      <---------LBD16             <---------LBD16        --------->ZAT2        ----------->HVH21     --------->MYB52(1)          ------>NtERF2     --------->WRKY38(1)   <---------ANAC58 ------->GT1--------->MYB46(3)   <---------ATERF1(1)<---------WRKY18(1)  <---------ANAC46 ------>GT1 <---------ABI4(2)    --------->LBD16   --------->WRKY12      <---------ANAC58 ->HVH21--------->LBD16         --------->ANAC46 --------->TOE1(3)       <---------bZIP60(2) ----->AGL1 <---------MYB55(2) <---------LBD16   --------->TOE2(3)  <---------AtLEC2 -----------TaNAC69(2)       <-----------GT1  --------->GLK1(1)   --------->AtLEC2<---------ANAC46   ggtaaaataccggaaccaccgcgagacagtttttccgccggcgttcggaaaccttgaccagctcctccatgcatgacttggatgacgagtatttctcaga  19136700                                                                                                    -                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                             <------NtERF2                  =========                                                      <---------ARR14(2)                  ------>ZmHOX2a(1)                                                      --------->GLK1(2)                   <---------At4g35610                                                      --------->ARR14(2)                  -----------                     --------->O2                 ----------------->AGL1           --------->ARR11(3)                     =====================================bZIP_DOF                 <---------ARR14(3)                     --------->ANAC46          <----------DOF2                     --------->ARR14(2)                     --------->TGA1a          <---------ANAC58          --------->At4g35610 <--------                     <---------TGA1a          <---------ANAC58  <---------MYB52(1) <---------ARR14(2)       <---------ZAT14                --------->GLK1(2)     ------>NtERF2          <---------ARR11(3)       --------->ZAT14                --------->ARR14(2)   <---------ARR14(2)      --------->ARR14(3)   --------->AtMYB61 <---------O2     <---------ARR14(2)   --------->ARR14(2)    ----------->ARR10 <-   gaaaaccactacagaagccctagacgtctccaacttggagaatccattgctttccgaatcggagccgttttctctgatgaacgaagatattcctctgcgg  19136800       --------->DEAR3(1)       <---------ANAC46      <------NtERF2      --------->ATERF1(1)      --------->RAP2.3(1)      --------->RRTF1(1)     <---------ATERF1(1)     <---------DEAR4(2)     <---------ORA47(2)     <---------RAP2.3(1)    <---------RAP2.3(2)    <---------DEAR3(1)    <---------RRTF1(3) --------->DAG2 --------->DOF2 ------ANAC46 ->NtERF2 -----LBD16        ----------->HVH21 --NtERF2<-----------RAV1(2) ----RRTF1(1)     <---------ANAC46            <---------ALFIN1 ----RAP2.3(1)   --------->At4g35610     <---------ARR11(1) >NtERF2 <----------CDC5                 --------->ARR14(2) ---RRTF1(2)     <------NtERF2           <---------ARR14(2) ---DEAR3(1)     <---------At4g35610    <---------ARR14(1) ---RAP2.3(2)   <---------MYB46(3) <---------ALFIN1 --At4g35610   <---------RAP2.6(2)<---------SPL7                                           <---------WOX13(1) ->At4g35610   --------->ALFIN1   <---------ZAT14          --------->At4g35610           --------->ATHB12 --LBD16------>NtERF2             --------->ZAT18          <---------ZAT2                <---------ICU4 ====================RAV   <---------------AtSPL8    <-----------HVH21                  <---------YAB1 >RAV1(2)<------NtERF2  ---------->DOF2 <---------CCA1(2)  <---------At4g35610  --------->ANAC58 ---RAV1(1)  <---------O2  <---------------AtSPL3   <-----------RAV1(1)         --------->ANAC58 -----NtERF2<---------AtMYB61  --------->SPL7------>ZmHOX2a(1)        <---------ICU4    --------->ICU4   cggaaagcggcgcagaggtggctgacaaaagagtaccgcaccgtatcctcacttctgtcgaagctgatgtaaacatcgctgcaatccaccatgattgttt  19136900                                                                                                    -                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                          ---------->DOF2         <---------ANAC58       <-----------GT1                                           ===========         <---------ANAC58     --------->GLK1(1)                                ----------->GT1   <---  <------NtERF2              --------->ARR14(2)                              --------->ICU4      ---- ------>NtERF2------->TEIL   <---------ARR14(2)                   <------ZmHOX2a(2) <---------ARR14(2)   aggcgcgtttttcttgcacctagatttaggggattttcagttttttttttttttttcatttagactggatcaagtcggaattagtgaattcgtaaagaga  19137000                                                                                              -------                                                                                              <------                                                                                        <------NtERF2 ------>TEIL                                                                           <---------ATERF1(1) ------ANAC58                         -------->ZAP1                                    ------>NtERF2< ------O2                           <---------WRKY18(1)                               --------->ATERF1(2) ----->ANAC55(2)                   --------->WRKY12                                   <---------RAP2.6(2) ------ANAC55(2)                   --------->WRKY38(1)                                --------->RAP2.6(2) ----->TGA1a                    --------->ALFIN1                                      <---------ATERF1(2) ------bZIP60(2)              <---------ANAC46                   <------------CBF    --------->RAP2.6(3) ------TGA1a                <---------ZAT14                <---------ANAC58          --------->ATERF1(1) ======bZIP_DOF           --------->REM1(2)                <---------ANAC58         ------>NtERF2   - ------ANAC58           --------->LBD16                    <---------ANAC46         <---------ATERF1(1) ----->O2              <---------ANAC46                  --------->ARR11(3)     ------>ZmHOX2a(2)   <   cgtgcctcacgatgaagaagtcgttccgagtagagtgttgacctagtttttcttacaaatttcttggaattgtgttttttgatcgaggccggccaagttc  19137100       --------->ARR14(2)       <---------ARR14(2)      <---------HSFC1(2)      --------->HSFC1(2)      --------->HSFB2a(1)      <---------HSFB2a(1)         --------->TOE2(3) -->ARR11(3)                   <---------ALFIN1 ---ARR11(3)              <-----------GT1 ---------LBD16--------->KAN4(2)  --------->AtMYB61            --------->YAB1          --------->AHL20(2) -------->HSFB2a(2)     <-----------HVH21                     <---------YAB1           <---------AHL20(2) ---------HSFB2a(2)  <----------DOF2           --------->AHL20(2)      <---------TOE2(3)        -----   ttctcggaagtttcgcttattctctttgtcacaacacctcaacttgaacttaaataaaaccagaatgatagttaagttttatagtttgtttaattcgtag  19137200                                                                               <---------ANAC46                                    <---------GLK1(2)                   --------->ANAC58                                    --------->ARR11(3)                  --------->ANAC58                                    <---------ARR14(3)          <---------ANAC58             --------                                    --------->ARR14(3)          <---------ANAC46        <------------                                    <---------ARR11(3)        <---------MYB46(3)       ------->TEIL                                  --------->ICU4----------->GT1 <---------ANAC58      <---------CCA1(2)   <----------DOF2 <-----------------------TaNAC69(2)     <---------TOE2(3)    <---------ANAC58 ------->CBF<---------ANAC46   --------->WRKY18(1)        <---------TOE1(3)    <---------ANAC58   caattctttttgttttgtagatgagtagaacaggtcaagattttgaaaaatggtatctctaaggttgtttgtgcaagcatgtcgtcttgtatctcaaaag  19137300                                                                                      --------->At4g35610                                                                                     ----------->RAV1(1)                                                                                    <------NtERF2                                                                                   <------NtERF2                                                                                   --------->LBD16                                                                                   --------->At4g35610                                                                                   ------>NtERF2                                                                                   <---------At4g35610                                                                                  --------->RRTF1(2)                                                                                  ----------->RAV1(1)                                                                                  --------->RAP2.3(2)                                                                                  --------->DEAR3(1)                                                                                 --------->ATERF1(1)                                                                                 --------->RAP2.6(1)                                                                                 --------->RAP2.3(1)                                                                                 <------NtERF2                                                                                 --------->RRTF1(1)                                                                                <---------RAP2.3(1)                                                                                ------>NtERF2                                                                                <---------ATERF1(1)                                                                               --------->ATERF1(2)                                                                               --------->ANAC46                                                         --------->LBD16       <---------ATERF1(2)                                                   ------>ZmHOX2a(1)           --------->DEAR3(1) -->DOF2         <-----------GT1       --------->ATERF1(1)     ---------->DOF2<---------RAP2.6(2) -----AGL1--------->ATHB12             <------ZmHOX2a(1)<---------TOE1(1) <----------DOF2         ---   gaaactcaagaacgatttgtttccaaacaaactccgatggaggaggcctcttcctcttccgaggtaaaagcacttcctttgccgccgcagcatcaagtgt  19137400  Previous    Next  AGI:  At3g51560.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G17050.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19520.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68293.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:I Range:  from: 19132787    to: 19136892    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51570.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82909.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC Range:  from: 19137337    to: 19141435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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