Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->GT1                        <------MYB46(1)                        <------MYB83                        <---------MYB46(3)     ---------->DOF2                     <---------MYB52(1)      --------->ANAC58                   <---------ANAC58          --------->ANAC58                                       <                   <---------ANAC58          --------->ANAC46                                <-------              <---------GLK1(2)            --------->ZAT6        --------->YAB1              <-------              --------->ARR11(3)         <-----------GT1       --------->GLK1(2)            <--------              <---------ARR11(3)   <---------AHL20(2)     ------->GAMYB                     ---------              <---------ARR14(2)  <---------AHL20(2)   ----------->RAV1(1)                  ---------              --------->ARR14(2)  --------->AHL20(2)  --------->REM1(1)         <---------LBD16  ----   atagaccccttaaacagattttcgtttggttacaaattttttttaacacgaaagcttcaacagagaatcagaagctattttcttcggaattgaatataat  19125900    <----------DOF2                                                                           -------   <---------DAG2                                                                             ------- -----------GT1               <---------LBD16                                                 <------ --YAB1                     <---------LBD16                                           --------->MYB52(1) --AHL20(2)               <---------ARR14(2)                                      --------->ANAC58 -AHL20(1)                --------->ARR14(2)                                      --------->ANAC58 >AHL20(2)             --------->AHL20(2)                                       ---------->DOF2 >AHL20(1)       <xxxxxxxxxxxxxxxxsmallRNA(i)            ----------->GT1     <-----------ARR10<------ ----->YAB1   <----------DOF2 --------->LBD16        --------->DAG2        <------NtERF2     --------   tgtaaccttttggcatctttgtgaaataaatccgcggtatagttgtatttttgaaaaattggtaaacagaaattggccgaatcaaagcaaaccgaataaa  19126000                                                                                  <-----------TGA1                                                                                 --------->ANAC55(1)                                                                     --------->TGA1a       <---------AHL20(2)                                                                     <---------TGA1a      <---------AHL20(1)                                                                     --------->ANAC58     --------->AHL20(1)                                                          <---------ARR14(2)     --------->ANAC55(2)                                                          --------->ARR11(3)     --------->TGA1a                                                     ----------->RAV1(1)         --------->ANAC58                                                   <---------ZAT14   <---------ANAC55(2)  <---------AHL20(2)                                                   --------->ZAT14   --------->ANAC58     --------->AHL20(2)                                                   --------->SPL7    --------->O2--------->ANAC58          --------->AHL20(2)                     --------->LBD16     ======================bZIP_bZIP          <---------AHL20(2)                    <---------ANAC58     <---------O2--------->ANAC46 <---------GLK1(2)                              <---------ANAC46   <---------ALFIN1     <XXXXXXXXXXXX -->AHL20(2)                                    <---------ANAC58----------->HVH21--------->bZIP60(2) -->AHL20(1)                                 <-----------GT1<------------CBF     --------->O2 ---AHL20(1)              ------->MYC3  <----------DOF2   --------->ARR14(2)     <---------O2    <--- ---AHL20(2)              <-------MYC3  =======================================bZIP_DOF--------->AHL20(2) ->AHL20(2)            <---------ALFIN1 <---------DAG2<---------At4g35610    <-----------GT1     ----   ttagattatcaaataaatgtaacacacacatgtagataactactttatttccgtgcagcatatattgtgacacgtctatttacacgtcataatataatca  19126100                                                                                         ----------->GT1                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC58   --------->TOE2(3)                                                             <---------ALFIN1   --------->TOE1(3)                                                           --------->AtMYB61   --------->YAB1                       <----------DOF2                  --------->AtMYB61 XXXXXXXMIR3434                 ------>ZmHOX2a(1)                      >>>>>>>>>MYB2--------->LBD16 ------At4g35610         --------->ARR11(3)                       --------->AtLEC2<---------LBD16 ----->At4g35610         <---------ARR11(3)                    <-----------------------TaNAC69(2)   <   gctaatcttaagtttctatgttcacattatcttcctctcatgctttataaaaaatggaagaaaatgacatgaaaaccaaaaccacacgggaatggaaaat  19126200                      ------>MYB46(1)                      ------>MYB83                    <---------------AGL15                    <---------MYB59                    --------------->AGL15                   ----------------->AGL3                   ----------------->AG           <---------AHL20(2)           --------->AHL20(2)                                                              <---------           <---------AHL20(1)                               <----------DOF2       <-----------GT1   <      <---------AHL20(2)                             <----------DOF2             <-----------GT1   <- ----------DOF2  <-----------GT1          --------->ZAT6  ---------->ID1     <---------AHL20(2)  ----   gcctttgttttattttatttaaccaaattttgaaacattctctatctctatctctcttttgtctttatatgacttctgttttatttccctgttctttgat  19126300                                                              ------->GAMYB                                                             --------->MYB46(3)       ------>ZmHOX2a(2)                                                        --------->ANAC46             --------->GLK1(1)                                                        --------->ANAC58             <---------GLK1(1)                                                   --------->At5g28300             <---------CCA1(2)                                                  --------->LBD16             --------->GLK1(2)  <---                                                 --------->LBD16              --------->ARR14(2) <---                                                 --------->ANAC46      <-------GAMYB<---------ARR11(3) -DOF2   <-----------GT1              --------->DAG2    --------->ANAC58      <---------ARR14(2)----- ---------TOE1(2)                    ---------->DOF2  ---------->DOF2  <------NtERF2--------->ARR11(3) --------ANAC46           ------>ZmHOX2a(2)     --------->LBD16       <---------MYB46(3)       <----- -->ZmHOX2a(2)         --------->ATHB12         <---------LBD16  <-----------RAV1(2)<---------AGP1   cgtgtgtttttaaaccgtcgatgagtgatcggagtctgaaaaagtctctccccggtaaaagcaatcgccaggcggatgagaatttggatctcttctcagt  19126400                                                                           <---------ALFIN1      <---------ARR14(2)                                                  ------>MYB83      --------->ARR14(2)                                                  ------>MYB46(1)   --------->ALFIN1                                                      ----------->RAV1(1)  <---------LBD16                                                    --------->REM1(1)  --------->LBD16       --------->YAB1                               --------->ANAC46 ------->GAMYB     ----------->GT1                            <---------DAG2------->GAMYB ------WRKY12      <------MYB83        <------MYB46(1)        <----------DOF2 ------WRKY38(1)   <------MYB46(1)     <------MYB83          <---------ANAC58          <---------YAB1 ---->WRKY18(1) <---------AtLEC2      --------->MYB59        <---------ANAC58       <---------YAB1 ------HVH21<----------DOF2      <---------YAB1         <----------DOF2 --------->AtMYB61   caaccgtggaacttctttggatggtatcatcatctattatttggtccatttgacttatcttttgcttttctacaccaacacacattgttattgttcttcc  19126500                                                                                                 <---                                                                                                 <---                                     ------>ZmHOX2a(2)                                           ----                   --------->ANAC55(2)                                                          -----          <---------WOX13(1)        <------ZmHOX2a(2)                                           <----        <<<<<<<<<RAP2.2            --------->ARR11(3)                              <---------ATHB12       <---------TOE2(3)           <---------ARR11(3)<---------YAB1              --------->WOX13(1)  <---------ANAC46 <---------ANAC55(2)  <----------DOF2                      <-----------GT1    <----   agttgtgtttagattgctatcacgttttgcattctaagatcgctttcatgctattctcatttcaatttgctagttttttttgccaatctttgtatacaat  19126600 ------ICU4 -----ATHB1                                    ------>ZmHOX2a(2)                 <---------ARR11(3) ----->ATHB51                     ------>ZmHOX2a(2)                          <------ZmHOX2a(1) ---->ICU4 <---------ATHB12     --------->ARR11(3)               <---------YAB1  --------->ARR11(3) - -----ATHB12               <---------TOE2(3)   =====================================HOX2a_HOX2a ----- -----ATHB51            <---------AHL20(2)    <---------------AGL15       <---------LBD16       -----   aattcgtcttccaataagtcatccatattaatgtgatctagcatgttgatctatatggtatgcagttttgattaaaccaggaagacattctttccaacaa  19126700                                    --------->YAB1                                    <-----------GT1                                 --------->YAB1                                                     -                          <---------YAB1                                                           <-                        <---------ICU4                                                             <-                        --------->YAB1                    ----------->GT1                          --                       <---------YAB1          --------->ANAC58                               ------- <---------TOE2(3)     --------->ICU4          --------->AtLEC2                               ------- --------->DOF2   <---------At4g35610       <-------TEIL------->TEIL                          ------- ---->ANAC58     ------->TEIL    <---------ICU4--------->ANAC46       --------->ANAC55(2)     ------- ---->ANAC58<---------AtLEC2    --------->ICU4 --------->ANAC58      <---------TOE2(3)        -------   gctaaagttgctaagcatggacctgatgatgacaataatcacaatatacatgcaaatgaaccgtaagaatttatgtaatccctcatttgaatttatacgc  19126800  Previous    Next  AGI:  At3g51540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71240.1) Range:  from: 19126321    to: 19128189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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