Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>ZmHOX2a(2)                                     <---------ATHB12                        <---------ARR11(3)                             --------->GLK1(1)                               --------->ARR11(3)                             <---------GLK1(1)                         ------->GAMYB                          <---------ZAT14                           --------->MYB52(1)                         --------->ALFIN1                        --------->ANAC58 ----->GLK1(2)         <---------ANAC46                          --------->ANAC58    <---------ANAC58 -----GLK1(2)          --------->ALFIN1                          --------->ANAC46    <---------ANAC58 >HVH21               <------ZmHOX2a(1)     --------->LBD16    ---------->DOF2<---------GLK1(1) <----   atttgaacaatggaaggcatttgaggagtggagttccaaatcgttccgaagaggttgtctcagtcaaaagcaacgggatgatctctggcttctgtgttga  19111300                          --------->TOE2(3)                          <---------DAG2          --------->At4g35610                                                  --------->AtLEC2          <---------At4g35610                                                  --------->ANAC58 -----   --------->ATHB12      ----------------->AGL1                --------->ALFIN1--------->ANAC58 <----  <---------YAB1       <-----------GT1                <----------DOF2          --------->ANAC46 ----- -----TOE2(3)       <---------ICU4             <----------DOF2 <---------AtMYB61                <----   tgttttcattgctgctctcaacttattaccttatgcagtcccgtttgagcttttagcttttgggagtggtcatgacaatccaagcaactctgagctagtg  19111400        <------ZmHOX2a(1) --------->ANAC58                                     --------->ICU4     <---------ICU4       --------->ANAC58                                   --------->YAB1 ---->ZAT14          <-------TEIL      --------->ARR11(3)                   <---------ATHB12 -----ZAT14   <---------ANAC46      --------->HSFB2a(2)           --------->YAB1           <--------- ---->ZAT18   <---------ANAC58      <---------HSFB2a(2)       <---------MYB52(1)<---------ICU4 -----ZAT18   <---------ANAC58   <----------DOF2       ------>ZmHOX2a(2)    <---------ATHB51   cgcttgataaggactggggtgagtacataagcactcttttagaacttgttttgatgatccctctgttagcataactcaataataagtatacctctttgtt  19111500                                                             <---------AHL20(1)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                             --------->AHL20(1)                                                          <---------AHL20(1)                                                          <---------AHL20(2)                                                 <---------TOE2(3)                                                 <---------TOE1(3)                                <---------YAB1  ---------->DOF2                          <---------ATHB12     <---------AHL20(2)                         <----------DOF2                    ----------->GT1   <---------TOE2(3)   --------->AHL20(2)          ---------->ID1- -DOF2      ----------->GT1<---------ICU4 ------->TEIL    --------->AHL20(1)    <----------DOF2<-----   gatcaaaactctgtttgtaaaatagtaaatcatttcgattaatgaatatttaaagtttaatattttattagtttctcttcttctttttgtcactttcatc  19111600           --------->ANAC58                                            <---------DAG2           --------->ANAC58                              <---------TOE1(3)         --------->TOE2(3)         <---------ALFIN1                      --------->ANAC58        <----------DOF2        ------>ZmHOX2a(1)                      --------->ANAC58       <---------ANAC58 ------>ZmHOX2a(1)                          <---------WRKY18(1)       <---------ANAC58 -------->TOE2(3)                    ---------->DOF2     <---------TOE2(3)       -------->P       <-- ----At4g35610                  <---------ETT(2)       *TSS    <---------ANAC46  ------->TEIL     ---   ttcctcagtcctcacgcttgtacatattatacagtagacaaaagcttgaacgaaatatgaaggttgtgtctggctttttgatcaacctttgaatcaattt  19111700                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                 ====================                                                              --------->GLK1(2)  <---------------AGL15         <---------TOE1(3)                                    --------->ARR14(2) --------------->AGL15         <---------TOE2(3)                                    ------->TEIL   --------------------->WRI1 -------HSFB2a(2)  <----------DOF2               <----------DOF2         <----------DOF2    --------- ------>HSFB2a(2)  <---------DAG2           ---------->DOF2   <---------ARR14(2)<-----------------AGL2   ccaaaacccttaaggtatacacttttttttatctcggtctctatggaaaagctttgattttgtgaatctgggtttctttctttctacatttagccaatta  19111800                                                                            <---------ZAT2                                                                            --------->At4g35610                                                                            --------->ZAT2                                                                            <---------At4g35610                                                                         ---------->DOF2       <---------TOE2(3)                                               ----------->HVH21 <---------DAG2                                                       --------->LBD16 --------------->AGL15                                               <---------ANAC55(2) <----------DOF2                                                     --------->ANAC55(2) <---------------AGL15                                            <---------WOX13(1) ---------GT1                                                    <---------ANAC58 -------GT1                     <---------ZAT14                  <---------ANAC58 --------->ARR11(3) --->YAB1                       --------->ZAT18       <---------ZAT18<---------ANAC58 ----ICU4               ---------->DOF2               --------->ZAT18<---------ANAC58     ----------- ---ATHB12       --------->ANAC58                    <---------ANAC58<---------ANAC46     <---------At4g35610 -->ICU4         --------->ANAC58                    <---------ANAC58<---------ANAC55(1)  --------->At4g35610 ================MADS_MADS--------->DAG2    --------->GLK1(2)   --------->ATHB12  <---------ARR11(3) >WOX13(1)     ---------->DOF2  <---------ZAT18<----------DOF2 <---------YAB1   ----------->ARR10   tcactttttagggtatagaaagccaaaaaaggtgttcacttgagagtttctttttgcgcactaacttgattgcgtgaaagctgagatttttcatctgagt  19111900                                                                    <---------ANAC46                                                                   <---------MYB46(3)                                                                   <------MYB46(1)                                                                   <------MYB83                                                                  <---------AtMYB61                                                                  <---------MYB46(3)                                                                  --------->ALFIN1                                                                 --------->ALFIN1                                                                 <--------P                                                                 <<<<<<<<<MYB98                                 <---------bZIP60(2)            <---------ANAC58                                 <---------ANAC46               <---------ANAC58        <---------ANAC58                   <---------HSFB2a(1)                          <-------GAMYB           <---------ANAC58                   --------->HSFC1(2)                           <---------ANAC46   --------->ARR14(2)                   --------->HSFB2a(1)                         <------MYB83        <---------ARR14(2)                   <---------HSFC1(2)        --------->YAB1    <------MYB46(1)    <------ZmHOX2a(1) >RAV1(2)        <------ZmHOX2a(1) --------->ALFIN1          --------->ALFIN1   <---------TOE2(3)   ggtatgtttagtatttgaaggagcttctcactgtgatgtggaagtaatcatatgagattagaagtgggttgggggaaatatgaaggatttgagtgagtga  19112000                                                ------>MYB83                                       <----------DOF2                                    <---------ALFIN1                                 ------>ZmHOX2a(2)           --------->ANAC58                                <---------GLK1(1)            --------->ANAC58                                --------->GLK1(1)         --------->ZAT18                               --------->ARR11(3)   <---------YAB1                               <---------ARR14(3) --------------->AGL15                               <-----------ARR10------>MYB46(1)                               --------->ARR14(3) <---------------AGL15                               <---------AGP1 <---------MYB111(1)                               --------->ARR14(2) --------->YAB1                               <---------ARR11(3)<-----------------AGL3                               <---------ARR14(2)<-----------------AGL1                  <---------YAB1                        ---------->DOF2<---------DAG2--------->YAB1            --------->AtMYB61          --------------->AtSPL8<------ZmHOX2a(2)<-----------------AGL2     <---------ALFIN1    ------->TEIL     <---------ANAC55(2)--------->ZAT14   <---------ZAT18 ------>ZmHOX2a(1)     <----   gagttgaatctgtgagtaccattacataaagaagatctccactttacacctactataatgggcactcaattacttcctccaccattgcctcatgcttagt  19112100                                                             <------NtERF2                                                           <---------RAP2.6(2)        ------>ZmHOX2a(1)                                                        --------->ICU4             ------>MYB83                --------->ANAC58                        <---------AtMYB61          ------>MYB46(1)                --------->ANAC58                   --------->ANAC58              <---------MYB59             --------->WRKY18(1)            <---------ARR11(3)               ----------->HVH21      ----------->HVH21                     --------->ARR14(2)             <---------ANAC58   --------->DAG2     <----------DOF2       <---------ARR14(2)             <---------ANAC58    <-----  ---------->DOF2 --------->YAB1           <---------CCA1(2)<---------MYB46(3)<---------WRKY18(1) <-- -----ZAT6  <-----------HVH21      <---------ATHB12--------->ANAC58        <---------O2   <----------DOF2   gagagaaagtgacaggtcaagcatctttcttccctcaaacattctatatctgctcgtaatggtggctaaattcagtgacttgaccttcctctctttttta  19112200  Previous    Next  AGI:  At3g51478.1    Description:  pseudogene of glutamate receptor family Range:  from: 19110900    to: 19111418    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g51480.1    Description:  ATGLR3.6 (Arabidopsis thaliana glutamate receptor 3.6). Identical to Glutamate receptor 3.6 precursor (GLR3.6) [Arabidopsis Thaliana] (GB:Q84W41;GB:Q9SD01); similar to ATGLR3.3 (Arabidopsis thaliana glutamate receptor 3.3) [Arabidopsis thaliana] (TAIR:AT1G42540.1); similar to GLUR2 (Glutamate receptor 2) [Arabidopsis thaliana] (TAIR:AT4G35290.1); similar to GLUR2 (Glutamate receptor 2) [Arabidopsis thaliana] (TAIR:AT4G35290.2); similar to glutamate receptor [Malus hupehensis] (GB:ABO28526.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71706.1); contains Inte Range:  from: 19111655    to: 19115804    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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