Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ---------->DOF2                         --------->MYB52(1)                        =============================HOX2a_HOX2a          <---------ANAC58          <---------ANAC58     ---------->DOF2       <----------DOF2  ------>ZmHOX2a(1) ----ANAC58     ===============HOX2a_HOX2a   --------->At4g35610                                   <- ----ANAC58     ------>ZmHOX2a(2)            <---------At4g35610   <----------DOF2                 -- -->HSFC1(2)  <---------ARR11(3)        <----------DOF2<---------AtLEC2                          <--- ---HSFC1(2)  --------->ARR11(3)--------->DAG2------>ZmHOX2a(2)  ---------->ID1--------->AtLEC2<-----   tgttagtctctttcttgatcttcttcctaaaggaaaagtactctttgatctgaacttccatggatttgtcttttcttctcaatgcagactgaagattaag  19092800                                                                 <---------ANAC55(2)                                                                 --------->ANAC58                                                                 --------->ANAC55(1)                                                                 --------->O2                                                                 --------->ANAC46                                                                 <---------O2                                                                 --------->ANAC58                                                                 --------->bZIP60(2)                                                                 --------->TGA1a                                                                 <---------TGA1a                                                            ----------->HVH21                                                           <---------ANAC46                                                          --------->At4g35610                                                          <---------At4g35610                                                        --------->ALFIN1                    <--------                                                      =====================bZIP_bZIP      --------->ALFIN1                                                      <---------ANAC58                  <---------ZAT2                                                      <---------ANAC58                  --------->ZAT2                                                      <---------ANAC46                  <---------At4g35610                                    <-----------HVH21 --------->O2                --------->At4g35610 --------GLK1(1)                   <---------ANAC46   --------->TGA1a             <---------At4g35610 ------->GLK1(1)                   <---------ANAC58   <---------TGA1a       --------->KAN4(1) ---ZmHOX2a(1)                     <---------ANAC58   <---------bZIP60(2)  <---------KAN4(2)--------- ----TOE2(3)                      ------>NtERF2       <---------O2<-----------HVH21     --------->At4g35610   gagatgctctctgagagtgagaactaggtttctcgctgcgtcgcaagagtctagtaacgtggctgacacgtcaagagaatgttcagcttgagctgtggga  19092900               <---------REM1(1)                                                    --------->HSFB2a(2)             <------MYB46(1)                              --------->REM1(2)         <---------HSFB2a(2)      <---------WOX13(1)     --------->DAG2            <---------ANAC58    --------->At4g35610    --------->ATHB12        ---------->DOF2            <---------ANAC58    <---------At4g35610  ----- -ANAC46     <------MYB83----------->GT1               <---------ANAC46  <-----------RAV1(2)    ----- >ALFIN1    <---------MYB46(3)                  --------->MYB52(1)     --------->GLK1(2)   --------->CCA1(2)   agagagtgattgagttggtgaagggaatggtaaagctcagagaggttgagtaacgaggcgtgaagagattgagaatcagatgagttttggaagagatgaa  19093000                                      <---------ARR14(2)                                      <---------GLK1(2)                                      --------->ARR14(2)          <------------AtMYB77      <--------                                 <------MYB46(1)                --------->MYB52(1)      <---------HSFC1(1)                                 <------MYB83                 ------>ZmHOX2a(2)         <---------HSFB2a(2)                                 <---------MYB46(3)           <---------MYB59           --------->HSFB2a(2)                       --------->At4g35610                   <------ZmHOX2a(2)          --------->HSFC1(1)           --------->At4g35610  --------->ALFIN1            <---------ARR11(3)         <---------LBD16           --------->ZAT2       <---------AtMYB61           --------->AGP1        <------MYB46(1) -->TEIL<---------At4g35610   <------ZmHOX2a(1)             --------->ARR11(3)    <------MYB83 ---->GLK1(2)          <---------At4g35610                  <---------AGP1       --------->MYB59   tctgagagagagcagcttgaaacttagcagaaggatggtggattcttgatggaagacttatagatctaactggcatttggagtttggtttctggaaatgc  19093100                                                                          <------ZmHOX2a(1)                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                     --------->ALFIN1                                                                    ------->MYC2                                                                    <-------PIF5                                                                    <-------PIF4                                               <---------AHL20(2)   ------->PIF5                                         ----------->GT1            ------->MYC4              -------                                         <---------ANAC46           <-------MYC3           *TSS                                         <------MYB83 <---------REM1(1)  --------->ANAC58 <---------YAB1                                        --------->MYB46(2)          ------->PIF4         <---------AHL20(1)                          ---------->DOF2<------MYB46(1)            ------->MYC3         --------->AHL20(1)             <---------At4g35610        <---------AtMYB61           <-------MYC2         <---------AHL20(2)    --------->TOE2(3) ---------->DOF2   --------->MYB111(1)   --------->ANAC58 --------->TOE2(2) -GLK1(1)    --------->At4g35610        --------->MYB59       --------->ANAC58 --------->TOE1(2)   catgtttcttaattctgctgaagaaaaagaaagaagagaggtttggtatatatatgatgaagccaaggcatgtgcaggaaacatgggatattatatttgt  19093200                                             <---------MYB46(3)                                     <-------MYC2        <----------DOF2                                     ------->MYC3      --------->HSFC1(2)                        --------->ANAC58    <---------DEAR3(1)                        --------->ANAC46    <---------AtMYB61             <---------WOX13(1)      ------->MYC2      <---------HSFC1(2)            <------------CBF         <-------MYC3      <---------HSFB2a(1)   --------->AHL20(2)   --------->ANAC58    --------->ALFIN1 --------->YAB1      --------->WRKY18(1) <---------AtMYB61                                       ---- ---->GT1  --------->ATHB12        ------->TEIL<---------REM1(1)                         ------->TEIL   taaaaataaacagtgattgtttagtcaagccacgatgcacatggaggtggtgaaggaagctttgaatgctctgttttatgctctgtttttgaacgtgaaa  19093300                                                 <---------YAB1                  <---------ANAC58                                           <---------ANAC58                      <---------ANAC58                                           <---------ANAC58                   --------->ZAT18                                      <---------REM1(1)                       <---------ZAT18                                      <-----------RAV1(1)                    --------->ALFIN1                                     --------->ARR11(3)               <------NtERF2         <------ZmHOX2a(1)           <---------ARR11(3)              --------->LBD16           <----- ------------->AGL3           --------->ICU4 <----------DOF2       <---------LBD16  <-----------HVH21   ccaattttagaggaccaaagatagatagagccattactagatgttgcctttgtgattcccatttagttagccggagagagtgggcttgtcagagtaagga  19093400                                                                               ------>ZmHOX2a(1)<----                                                                        <-----------GT1       -------                                           <---------ANAC58       <---------AHL20(2)         <-------           <-----------RAV1(1)             <---------ANAC58      <---------AHL20(2)        <--------- --------->AtLEC2--------->DEAR3(1)     <----------DOF2          <---------AHL20(1)<-----------GT1<-- -ZmHOX2a(1)<-----------HVH21  --------->GLK1(1)                 --------->AHL20(2)<---------AHL20(2)   gacatggaaacatttgtcgcagaccattttcagatttcaactctttcttgtttcatccaattgtcaattttttttttcttcctattaacttattcaccat  19093500                                      --------->ZAT6                                     --------->ZAT14                                      -----------  <-----------------AGL1     --------->ARR11(3)                                      ---------->DOF2 -----MYB52(1)           ---------->DOF2    ---------->DOF2                        --------->ANAC58 -->ATHB12          ----------->GT1  <---------ZAT14                               --------->ANAC46 --YAB1      <---------ANAC46<---------ARR11(3)                 --------->AHL20(2) --------->ANAC58 - --GT1       <---------MYB46(3)<-----------HVH21    ----------->GT1 <---------AHL20(2)   --------->ARR11(3) -------MYB46(3)--------->REM1(2)<-----------GT1 <---------MYB46(3) --------->AHL20(2)   <---------ARR11(3)   tggttcccaagacggtcgtgaagagaaaaaagatgtcacaacactacaaagttgttgtaaaacaaaaaaaataaatactatatacacgaaagatgttaca  19093600                                        --------->GLK1(1)                                 --------->AHL20(2)                                    ------>MYB46(1)                                --------->YAB1                                         ------>MYB83                                --------->AHL20(2)                                 ------->TEIL                                <---------AHL20(2)                                <---------ALFIN1                             <--------ATHB1                                      --------->ZAT18                             <---------ICU4                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             --------->YAB1                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <--------HAHB4                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                             --------->ATHB51              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <---------AHL20(2)  <---------ATHB51               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->DAG2             <---------ATHB12              <------------------------ANAC81           < >GT1 <---------YAB1        --------->ICU4             <----------DOF2           <---------ZAT18 <--- --------->DOF2    <---------YAB1<---------AHL20(2)--------->KAN4(2)         <-----------RAV1(1)-----   aaaaaagtattattttgcattttcaatgcaataattaaaatgaattccaagtttattctttttttttttttttttttttttggtgcaccttccaagttta  19093700  Previous    Next  AGI:  At3g51410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23714.1); contains InterPro domain Protein of unknown function DUF241, plant (InterPro:IPR004320) Range:  from: 19092236    to: 19093191    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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