Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------At5g28300                           --------->YAB1        <-----------GT1                           --------->AHL20(2)                             ----     >>>>>>>>>>AtMYB44                        <---------AHL20(2)                               <-----     --------->MYB46(2)                    <---------AHL20(1)                                  <-----     --------->MYB52(2)                 --------->AHL20(2)                  --------->TOE2(3) <------     --------->MYB111(1)<---------ARR14(2) --------->AHL20(1)              --------->REM1(1) <-------     --------->MYB59    --------->ARR14(2)--------->AHL20(2)     --------->YAB1        <----------DOF2  ------------>MYB.PH3(2)             --------->AHL20(2)        <---------YAB1         ------>ZmHOX2a(1)   atcaagttagttacggtctcttctcaaatccagtaaaccaaaaaatatataaaaaaatcatactctataataaacttacatcaaatgtcctttttttaac  19086200                                                                                   <---------TGA1a                                                                                   --------->ANAC46                                                                                   --------->ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   --------->TGA1a                                                                                   <---------O2                                                                                   --------->O2                                                                                   ==================                                                                                   ==================       <---------ANAC46              <---------YAB1                            <-----------GT1  <-----------RAV1(1)              --------->YAB1                        <---------YAB1 <---------TOE2(3)    --------->ARR11(3)                               --------->YAB1         <------ ----->TOE2(3)        <---------ARR11(3)       <---------YAB1         ----------------------->TaNAC69(2) ----TOE1(3) <---------ANAC55(2)  <---------YAB1                      <---------YAB1      ------>ZmHOX2a(1) ----TOE2(3) --------->ANAC55(2)--------->CCA1(2)          <---------------AGL15   ================== -----GT1 <---------SPL7       --------->ARR14(2)          --------------->AGL15   --------->ANAC55(1) ----GT1<---------------AtSPL8 <---------ARR14(2)       <---------ARR11(3)<---------ICU4  <---------CCA1(2)   gtttatgttgggagtacgtagtgagatttttcagatatgataaatgtttatgtttgaagttctattttgagtatcatcattttacacgtctcctatcttt  19086300                       --------->ANAC46                      <---------ZAT18                      --------->ZAT18                      --------->RAP2.3(3)        <---------ATHB12    <---------ATHB12<---------At4g35610  --------->WOX13(1)--------->PCF2                  --------->YAB1 ===================bZIP_DOF                  --------->ANAC46 =========================bZIP_DOF      <-------GAMYB  --------->ATHB12 ----DOF2---------->DOF2 <---------ALFIN1<---------MYB52(1)                                      <--- ====bZIP_DOF  <----------DOF2         ----------->GT1<---------YAB1         <---------ALFIN1 -------   tcttcaatcaataaagcctttgagcccacaacttcgtaataccgttaaacccaattgttattgggcatgaaaacaaggcccaactcaagtctatctcccc  19086400                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                     --------->YAB1                                                                     <--------ATHB1                                                                ------------>CBF                                                               <---------ANAC55(2)                                                               --------->ANAC58                                                               --------->ANAC55(2)                                                               --------->ANAC58                                                             <-----------GT1<------NtERF2                                                      <-----------GT1<------------ATHB5                                                  --------->AHL20(1) --------->ATHB51     -------->P                                                  --------->AHL20(2) <---------ICU4       ------>MYB46(1)                         <---------ANAC58         <---------AHL20(2)<---------ATHB12      ------>MYB83                         <---------ANAC46        <---------AHL20(2) --------->ICU4      <---------MYB59                         <---------ANAC58        --------->AHL20(2) <---------ATHB51   --------->HSFB2a(1) ------ALFIN1     <---------ANAC58          --------->At5g28300--------->ANAC46       ------->TEIL -->ANAC46        <---------ANAC58         ----------->GT1<---------ICU4 <---------LBD16<---------MYB111(1)   cacttgttcatcttctattgtcttgttgcgagtttgcgacttaaacagtaattaaattactaattacgcaataatggcggattaatcgaacctactctct  19086500                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                           --------->At4g35610                 ------                                                          ------->TEIL              <---------AHL20(2)                                                       *TSS<---------At4g35610      --------->AHL20(2)                                                     <---------ANAC58              --------->AHL20(2)                                                     <---------ANAC58  <---------ARR11(3)      <-----                                                     <---------ANAC46  --------->ARR11(3)      <-----   ctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgtgcatctccataaactatcttcaaagattaaattttgaagat  19086600        <---------ANAC46        <---------ANAC58        <---------ANAC58       ---------->ID1 <----------DOF2 -->ZmHOX2a(2) --ZmHOX2a(2) ------ARR10            <-----------HVH21 ----ARR11(3)       --------->GLK1(2) --->ARR14(2)      --------->ARR14(2)                                ---------->DOF2                < --->ARR11(3)      <---------ARR14(2)                        <---------ANAC58                     <-- --->ARR14(3)      <---------GLK1(2)                         <---------ANAC46                     <-- ----ARR14(3)  <-----------------AGL1                        <---------ANAC58          --------->AtMYB61 ----ARR14(2)<-----------GT1           <<<<<<<<<TBF1   <---------ATHB12              >>>>>>>>>>MYB80<   cttctttttggcttattacccgattctgtcactgtctcttcttcttctccaatcccaatgtttgcttgagagaaagagagagagtcaaaccaaaacatgg  19086700                                                                <---------CCA1(2)          <----------DOF2                                 ------>MYB46(1)    --------->TOE1(1)   <-------GAMYB                                          ------>MYB83      ------>ZmHOX2a(1)  <---------MYB46(3)                                    ------->GAMYB       --------->LBD16  --------->MYB55(2)                                    --------->AtMYB61   --------------->AtSPL8  <-----------RAV1(1)           <---------ZAT2       <---------ALFIN1    ========================HOX2a_HOX2a  --------->MYB52(2)         ------>ZmHOX2a(2)     ------>ZmHOX2a(1)    <---------ARR14(2)=========== -------GAMYB                =============================HOX2a_HOX2a   --------->ARR14(2)=========== -------ANAC58         --------->LBD16             =============================HOX2a_HOX2a       <-- -------ANAC58        <---------LBD16             --------->ANAC46   <-----------------AGL1   <------ ---------MYB52(1)    --------->TOE1(2) <---------YAB1 --------->MYB46(3)<------ZmHOX2a(2)------>ZmHOX2a(1)   gcgtttgttgccctttccttcaaccctgggatcgagctcgtgatcaatgtctcctcaacctcccttgtctctccgatcctggtaccaatttcctctcttt  19086800                                 <------MYB83                                                       <                                 <------MYB46(1)                                         ------>ZmHOX2a(2)                       --------->ALFIN1                                                 <------ZmHOX2a(2)                      <---------MYB52(1)                                               --------->ARR11(3)                     --------->LBD16                                                   <---------ARR14(2)                   <---------LBD16                                                     <---------ARR14(3)                   ------>ZmHOX2a(2)                                                   <---------ARR11(3)                 <---------ARR14(2)                                                    --------->ARR14(2) --------->TOE2(3)<------ZmHOX2a(2)                                                    --------->ARR14(3) ========================HOX2a_HOX2a                <---------MYB59                    <-----------ARR10 =========================HOX2a_HOX2a    <---------YAB1 <---------WOX13(1)-------->P ----------->ARR10 ---------GT1    --------->ARR14(2) <-------TEIL  ------->TEIL         --------->At4g35610          < ----DOF2     <---------TOE1(2) --------->MYB59  <---------CCA1(2)     <---------At4g35610          <   ttaccctaatctatctcacgatccggtgtttcattaggttcttatgattctgtatctaattgctatcttcttcatctacccagttcgaagatcttctcta  19086900                                                                                                    <                                                                                                   <-                                                                                                <----                                                                                              -------                                                                                          <-------TEIL                                                                                         <------ZmHOX2a(2)                  --------->At4g35610                               --------->ATHB12     ============ --------------->AGL15                                              <---------AHL20(2)  <---------ARR11(3) --------->HSFB2a(2)                                               <---------AHL20(2)   --------->AGP1 <---------------AGL15           <----------DOF2                   <---------AHL20(1)   --------->ARR14(2) -----------------AGL3         ---------->ID1       <----------DOF2--------->AHL20(2)   --------->ARR11(3) -----------------AGL1     <---------ALFIN1         <---------DAG2 --------->AHL20(1)   <---------ARR14(2) -----------------AGL2  <---------ALFIN1  <----------DOF2   --------->At4g35610        --------->GLK1(1)   cttctgaaattggcactagtagctctccacctcgtctttatcggctttctcttccttttcgatgctgaatttattgagaaaactaaacgagatccatggt  19087000                                             <----------DOF2                    <------MYB83       <---------CCA1(2)           <---------ARR14(2)                           <------MYB46(1)      ------>ZmHOX2a(1)            ------->TEIL <---------TOE2(3)            <---------MYB52(1)  <--- -----------GT1                    --------->ARR14(2)                      ----------->HVH21<-------GAMYB --------YAB1                     <---------CCA1(2)                        <---------YAB1  ---------- -----YAB1        <---------At4g35610      --------->At4g35610           --------------->AGL15   ---- ---->GT1<---------CCA1(2)    <---------At5g28300   <---------YAB1      <-----------------AGL1  <---- ============HOX2a_HOX2a <---------AHL20(2)<---------At4g35610       <----------DOF2       <---------MYB46(3)   tattactccttatctctctctgcttattcaattactgtatccttgagcttaatgttgattactctgtgattctttctctgataggtatatgggctgttat  19087100  Previous    Next  AGI:  At3g51390.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G48760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23721.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 19086555    to: 19089099    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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