Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                     --------->LBD16                                                                    <---------ANAC55(2)             -                   --------->ANAC58                                 <---------HSFB2a(2)            <-       <---------ALFIN1      <----------CDC5                        --------->HSFB2a(2)            <-  <---------ARR11(3)     ------>ZmHOX2a(2)                          --------->ANAC55(2)           <--  --------->ARR11(3)    <------ZmHOX2a(2)                          <---------LBD16                <-- -------->ANAC58   --------->ANAC58      --------->TOE2(3)   ----------------->AGL1               <-- -------->ANAC58<---------ATHB12         --------->TOE1(3)   <-----------------AGL1           <------   gcaagacctcgacctctaatcaagcgatcgcgatgagccaaaaccttgaagtactccaaacttccctgttccggaactagatcgccaagaccaagacttt  19074100                                                                                 <---------MYB52(2)   --------->ANAC55(2)                                                      --------->ANAC58   --------->ANAC46                                                         --------->ANAC46 <---------WRKY18(1)                                                        --------->ANAC58 --------->MYB52(1)                                                        ------->GAMYB ---------->HVH21                                                         <---------ALFIN1 ---------DOF2                                                          ----------->RAV1(1) --------WOX13(1)                                                      --------->ANAC46 -------ANAC58          <---------ZAT18                              --------->ANAC46 -------ANAC58          --------->ZAT18                           <---------ARR14(2) -------AtLEC2       <---------ANAC46                             --------->ARR14(2) ----DOF2           --------->ALFIN1                  <---------ALFIN1--------->LBD16            ----   gcttgacggaatcagagaaaatgtggtggacttcgaagccaaacttcccagtagcctcacatctctcaaatccccaacacaccactaacacagacaataa  19074200                                                                                                    <                                                                                                    <                                                                                                   --                                                                                    <---------MYB52(1)                                      <---------TOE2(3)               --------->LBD16              <-          <---------ANAC58  --------->ZAT14             ----------->GT1 ----------->GT1         -----          <---------ANAC46  <---------ZAT14    --------->HSFB2a(2)   <---------HSFB2a(2)        <----          <---------ANAC58 <----------DOF2     <---------HSFB2a(2)  <---------LBD16 --------->DOF5.7(2) ----->ZAT6         <-------TEIL    ---------->DOF2   ---------->DOF2--------->HSFB2a(2) <----------DOF2   cacaaacacttggcgtgcaacgtccatgactttactctcaaaggtttttctcgtagaaaagaaaaacacttccggagtaaaactccgtttactttctcag  19074300                            <---------------AtSPL8             ----------->TGA1        --------->ANAC58    <---------------AtSPL3        --------->ANAC46  --------->ARR14(2)        --------->ANAC58--------->LBD16                 <----------ID1    --------->CCA1(2)  <---------ANAC55(2)              ----------->GT1 ---------------------WRI1<---------ARR14(2)           --------->DAG2 ---------TOE2(3)      <---------ANAC46              ---------->DOF2 ------->MYB52(1)     <---------LBD16           ----------->GT1                          --------->ARR14(2) --------DOF5.7(2) <---------ARR14(2)         ---------->DOF2             <-----------HVH21 ---->At4g35610    --------->ARR14(2)        <------ZmHOX2a(1)      <---------WRKY18(1)--------->ANAC46 -----At4g35610    ------->TEIL            <---------TOE2(3) ---------->DOF2       <-----------GT1   ataacgatacacaccatgacgaatcccgtatatgtacagaaatttgaggaaagtaaaaaggtcaaaagcttgactcggtcgcattgtaccagacatgctg  19074400                                                               --------->ARR14(2)          --------->DAG2                                                               ------->TEIL              *TSS                                                               <---------ARR14(2)     <------ZmHOX2a(1)                                                              <---------CCA1(2)  ----------->HVH21            <---------GLK1(2)                          --------->AHL20(2)       --------------->AGL15   --------->At4g35610                                 --------->ATHB51         <---------------AGL15   <---------At4g35610                                <---------MYB52(1)       <---------LBD16  --------->GLK1(2)         --------->ZAT6            --------->ICU4           ----------------->AGL1   agagaagctgatttgattctcttcgaactaatactagtttaatcggagtagtagccattattttgtatcttcgtcttgtttccctgaaggagaaaggttg  19074500                       <---------MYB46(3)                       --------->MYB55(2)                      --------->ALFIN1                                          <---------YAB1                   <---------DEAR3(1)                                        <---------AHL20(2)                  <---------LBD16        <-----------GT1<---------YAB1     <----------DOF2              <----------DOF2 <---------DAG2        <-----------TBP  <---------WRKY12        --------->GLK1(1)     <----------DOF2     <----------DOF2  <-----------HVH21   acgaagacagagttctcttttgcggtgggagactttttgaaattagccattcctttttataagtgtcttcgtcaactcttttatttttgttgaaatgccc  19074600                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                     <---------AHL20(1)               <---------ZAT18                                ------->GAMYB              <-----------GT1                                <---------MYB52(2)             --------------->AtSPL8                          --------->MYB46(3)     ----------------------->TaNAC69(2)              <---------AHL20(2)                          ----  <---------ALFIN1                     <----------DOF2     <-----------GT1                       <--- --------->ZAT14                  <-----------GT1    --------->AHL20(2)             <---------MYB46(3) <---------ZAT14             <---------MYB52(1)      <---------AHL20(1) <----------DOF2          <--- <---------REM1(2)         ------>ZmHOX2a(1)  ---------->ID1<---------TOE2(3)    <-----------RAV1(1)   ctctacacttcgtattttgcacttcattcctgttattttctcttttttgtcttattttatttaacgaacaatatctttttctattgttgttgatatcata  19074700                                                                    <---------RAP2.6(3)                                                              <---------ICU4                                                              --------->YAB1             --------->YAB1                                  <---------ATHB12                      --            --------------->AGL15                 --------->WRKY38(1)                              -- ----->AHL20(2)                                 --------->At4g35610 --------->LBD16              <--- ------YAB1 <---------------AGL15               <---------At4g35610 ------>NtERF2                <--- ------AHL20(2)<---------YAB1    <---------TOE2(3)--------->WRKY12 --------->RAP2.6(2)          -----   taattccctagttactcataatagacaacattgttgatgttttctcttacagttgaccttctaatcatgccgcaatagagtatcaatagtacatgtatac  19074800                                    --------->YAB1          <---------AHL20(2)     --------->YAB1  --------->TOE2(3)             <---------YAB1 ---->MYB83---------->DOF2   <---------YAB1 ---->MYB46(1)----------->GT1<---------AHL20(2)                      ----------->GT1               -- ------MYB111(1)          <----------DOF2                      <---------AHL20(2)                 --- ------MYB59 --------->DAG2  --------->AHL20(2)                --------->AHL20(2)             ------- ---->ANAC55(2)    <-----------GT1 <---------YAB1              <---------AHL20(1) <---------ARR14(2)-   ctaatcttatattaaaaggttatacgagctttttattatcatactaaaattcgacttgtatacaaaaaatttagaaaaatagaagttccttcagagaaat  19074900        <------ZmHOX2a(1)      --------->ALFIN1 ------->GAMYB --------->ICU4      --------->WOX13(1) ------->At4g35610           <----------DOF2                                                 <------- ------>MYB52(1)          <-----------GT1                             <-----------GT1        <------- -->GLK1(1) --------->ZAT18  <---------DAG2 --------->CCA1(2)     <----------DOF2            <------- -------->MYB46(3)     --------->YAB1  ---------->DOF2        <-----------GT1      ---------->DOF2   caacagacgaggagggcattatgcattataactttataaatcaaagatagacaagttgaattagtttccttttctccattttgtttaaagtcttggctta  19075000  Previous    Next  AGI:  At3g51350.1    Description:  aspartyl protease family protein. similar to pepsin A [Arabidopsis thaliana] (TAIR:AT3G51340.1); similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G51330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23259.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 19071301    to: 19074489    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version