Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->DOF2                                    --------->GLK1(2)         ------>ZmHOX2a(1)                                       --------->ANAC46        <------MYB46(1)        <---------------AGL15                                    --------->ANAC58        <------MYB83        --------->TOE2(3)                                        --------->ANAC58       --------->MYB46(2)        --------->TOE1(3)                                     ------>ZmHOX2a(2)         --------->MYB59    <---------ANAC58                                     <---------WOX13(1)   <-------GAMYB    <---------ANAC58 <----------ID1                     <---------ANAC58     <---------MYB46(3) <--------P---------->DOF2                              <---------ANAC58    <---------AtMYB61 <------ ->GT1  --------------->AGL15     <-----------GT1       <---------AtLEC2 <----------DOF2--------->MYB111(1)   gaggttgcttccttaaagagagaaagacaaattgttttaccatttgctctctgtttttgcttgatccaagctaatcttttggttgaatgttaggttgagt  19053500                                                                                                    -                                                                                                    <                                                                                            -------->ATHB1                                                                                            ---------                                                 <---------ANAC58                           <--------                                   <---------YAB1<---------ANAC46                          <---------ATHB12                                <----------DOF2  <---------ANAC58                   --------->ANAC58< ---ANAC46           ----------->GT1--------->ATHB12                                --------->ANAC58<   ttatgctgttttcgaaatgaaattggttaaatgacttttcattgaatcactgcttgaaacttcatcaattcaactacttcttagccaagtcaaatcattg  19053600                                               --------->MYB111(1)                                               --------->MYB59                                               --------->MYB52(2)                                               --------->MYB46(2)                                               --------->MYB111(2)                                            ------------>MYB.PH3(2)                  <--------HAHB4           --------->MYB111(2)                 --------->ICU4            --------->MYB52(2)              <---------ARR11(3)           --------->MYB46(2)        -------->P<XXXXXXXXXXXXXXXXXXXXMIR868<---------MYB52(1)        ------>MYB46(1)                    --------->MYB111(1)              ---------->DOF2      <---------MYB111(1)                  --------->MYB59                <---------------AGL15      <---------MYB59                    <---------MYB52(1)               --------------->AGL15  ----------->HVH21    <---------TOE2(3)------------>MYB.PH3(2)          <---------ANAC58          <- -------->At4g35610    <---------YAB1  --------->MYB52(2)       <---------ANAC46                 ---- ------MYB83<---------TOE2(3)          --------->MYB46(2)  --------->MYB46(2)                    ---- >ATHB12------>MYB83  <-----------GT1  --------->MYB111(1)<--------P     <---------ANAC46       <---- -ICU4<---------MYB46(2)            ------------>MYB.PH3(2)--------->MYB111(2)       --------->ANAC58 ---------At4g35610 <---------YAB1 --------->ALFIN1     ------------>MYB.PH3(2)      --------->ANAC58 ------MYB46(1)  <---------YAB1    <---------ZAT6      --------->MYB59   <---------ANAC58      <-----   gaaggtgacctaccaaggtattattaacattggagaagtgttagttagttagttagtgaggtagttaaggggattgcttaaagaagtaagcaagtttaat  19053700                         --------->MYB52(1)                      --------->ANAC55(2)                      --------->ANAC55(1)                      --------->ANAC58                      <---------ANAC55(2)                      --------->ANAC58                    --------->At4g35610                      --------->ANAC46                    <------NtERF2                     ------->TEIL                      XXXXXXXXXXXXXXXXXXXX>MIR851-3P --------YAB1    --------------->AtSPL8                --------->At4g35610 ----->YAB1      <---------------AtSPL8     --------->ATHB12      <----------ID1 ---->HAHB4      <---------------AtSPL3    <---------YAB1----------->RAV1(1) -----YAB1      <---------ANAC46  ---------->DOF2      <---------At4g35610  <---------MYB59     ----- ----TOE2(3)    <---------bZIP60(2)      <---------At4g35610    ---------->DOF2      <---------GLK1(1)   gataatcaaacactcgtgatgtgtacgtaacagaagaaaagagagatgattcgtttgagcggcagaaaaagacaagtgcctaatttgatttcccataaat  19053800             ----------->GT1             <------MYB83                                                                     <------             <------MYB46(1)                                                                  -------           <---------WOX13(1)                     --------->ARR14(2)                        <--------          <------------CBF                        <---------ARR14(2)                    <---------LBD16         --------->ATHB12                        --------->GLK1(1)                 <------MYB46(1)   ------------>CBF                              <---------GLK1(1)                 <---------MYB46(3)  --------->ANAC58        --------->MYB52(2)   <------ZmHOX2a(1)  *TSS             <------MYB83  --------->ANAC58    --------->ATHB12   ---------->DOF2   --------->YAB1<----------ID1 --------->At4g35610  --------->ANAC46   <---------YAB1     <---------AHL20(2) --------->ATHB51       --------->MYB59 ---->AHL20(2)    --------->ICU4  <---------At4g35610 ------------>CBF ---------->DOF2  <---------At4g35610   aaacacacaatcgattggtaattttgattagttgggagctattaaaagaggaaatccacaataatcggaaatagaaagacaagtttggttagcggaacgt  19053900               --------->ANAC46               ------>NtERF2               --------->LBD16           <-----------GT1       <---------MYB111(1)   ------->GAMYB------>NtERF2    <---------MYB46(2)  --------->ANAC46               <---------MYB59  <-----------GT1  --------->ANAC58               <------------MYB.PH3(2)  --------->ANAC58 ---------->DOF2      <----------DOF2 ---HSFB2a(1) --------->LBD16    <---------MYB111(2)                                              <-- -->HSFB2a(1)<---------LBD16     <---------MYB52(2)                                       <---------- -ARR14(2)<-----------GT1  --------->ZAT6   ---------->ID1                        <---------AHL20(2)   ttcaacgccatttttcccggccaaagctaactctaactaactctttgttttttttcggtttttgtgccatcttccagttttcattttttttgtttcccct  19054000                                                           ---------->DOF2                                                         --------->LBD16                                                        --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC46                                                       <---------LBD16  <----------DOF2                                    --------->ARR14(2)          --------->YAB1 -------CCA1(2)              --------->HSFB2a(2)     <---------ARR14(2)     <------ZmHOX2a(2)<------- -GT1                       <---------LBD16 <---------ATHB12     <-----------RAV1(2)   --------->ARR11(3)   ctatctttttgggtaatagggtttctaatctctgggacaaactccaatcgtttcgaatccgcaatgcccagatggtcgatcaatagaaatatcaagagtc  19054100                                                                                                    -                           <----------DOF2                                                        <--                          ------>ZmHOX2a(2)          <---------AHL20(2)                           <--                         <---------RVE1(1)           --------->AHL20(2)                           ---                         <------ZmHOX2a(2)          --------->AHL20(2)                            <--                        <---------ARR11(3)     --------->LBD16                                    <--                        --------->AGP1        --------->LBD16                                --------                        --------->ARR11(3)   <---------LBD16                                ---------               --------->ARR11(3)     <---------AHL20(2)                                <-------TEIL- --GLK1(2)     <---------ARR11(3)     --------->AHL20(2)     <----------DOF2    <----------DOF2  <---   tccaattccaaaggctaaatctttgagatctttttttttataaatttccctgaaattaataaactttgaggggaaatgagcgcttcgaggttcgtaaagt  19054200        <------MYB46(1)        <------MYB83       <---------AtMYB61       --------->MYB46(2)       --------->MYB55(2)       <---------DEAR3(1)      <---------MYB55(1)      <---------MYB52(1)      <--------P     <-------GAMYB    <---------DEAR3(2)    <---------MYB46(3)   <---------ANAC46 --------->MYB52(1) ------------>AtMYB77 ---------->HVH21     <---------ANAC46 -------ANAC55(2)     --------->ETT(1)                              --------->SPL7    <---------YAB1 -------ANAC58      <-----------HVH21                              --------->STY1(1)<---------ICU4 ------>ANAC55(2)--------->At4g35610                              <---------SPL7    --------->YAB1 -------ANAC46   <---------At4g35610                         <----------DOF2       <---------ATHB12 -------ANAC58   <---------ZAT2                      --------->ANAC46              <---------ATHB51 ->DAG2--------->MYB111(2)                           --------->ANAC58   <---------MYB52(1)         <- ->DOF2<---------MYB46(3)            <-------GAMYB   --------->ANAC58  <-------GAMYB-------->ATHB1 <- ---------->TGA1 --------->ZAT2     <---------MYB46(3)    <---------ALFIN1--------->MYB59<----------DOF2 ----TEIL    <---------REM1(1)      --------->MYB52(2)  ----------->RAV1(1)        --------->ICU4  <-   gcgtgacggttggtgatggagctgtcggaaaaacttgtttgttgatttcttacacaagcaacactttccctacggttatgtcccaattattctttcatgt  19054300                                                                             <---------MYB52(1)                                                                         ------>MYB83                                                                         ------>MYB46(1)                                     <---------ANAC58                    -------->P                                     <---------ANAC58                ------->TEIL                                     <---------ANAC46             <---------ANAC58                               <---------TOE1(2)      --------->CCA1(2)  --------->MYB52(1)                          <---------ARR11(3)         <---------ARR14(2) --------->MYB55(1) --------ANAC58           --------->ARR11(3)         --------->ARR14(2)<---------MYB46(2) --------ANAC46          <---------CCA1(2)      <---------ANAC46  <---------ANAC58   <---------ICU4<- --------ANAC58      ----------->RAV1(1)     <----------DOF2 <------ZmHOX2a(1)  <--------------------   ttcttgtttcattaccacaacaacaacatatctcatgtttcttgtttcttttgtggatatacaggattatgtgcctaccgttttcgataatttcagtgcc  19054400  Previous    Next  AGI:  At3g51290.1    Description:  proline-rich family protein. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G60320.1); similar to unknown [Gossypium hirsutum] (GB:AAN05792.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630 (InterPro:IPR006868) Range:  from: 19050959    to: 19053548    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g51300.1    Description:  ARAC11/ATRAC11/ATROP1/ROP1/ROP1AT (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase/ protein binding. Identical to Rac-like GTP-binding protein ARAC11 precursor (ARAC11) [Arabidopsis Thaliana] (GB:P92978); similar to ARAC1/ATGP2/ATRAC1/AtROP3/RAC1/ROP3 (Rho-related protein from plants 3) [Arabidopsis thaliana] (TAIR:AT2G17800.2); similar to ARAC1/ATGP2/ATRAC1/AtROP3/RAC1/ROP3 (Rho-related protein from plants 3), GTP binding [Arabidopsis thaliana] (TAIR:AT2G17800.1); similar to Rac-like GTPase 1 [Nicotiana tabacum] (GB:AAK31299.1); similar to NTGP2 [Nicotiana tabacum] (GB:AAD00117.1); contains InterPro domain Ras GTPase; (InterPro:IPR Range:  from: 19053866    to: 19055351    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version