Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <-------MYC3                  ------->MYC3              <-------TEIL            ------->MYC3                                                               --------->YAB1            <-------MYC2     --------->ALFIN1                     <---------------AtSPL8          <--            <-------MYC3    <-------MYC3                          --------------->AtSPL8    <--------         <---------ALFIN1  <---------O2                           <---------------AtSPL3  <---------ICU4 ------->CCA1(2)------->TEIL------->MYC3             --------->AtLEC2                 <---------YAB1 -----ZAT6  ------->MYC2   <---------ANAC46  ---------->DOF2  ---------->DOF2    ------>ZmHOX2a(1)===   gatagacagacacacatgcatgtgaagaaacgtggaacacaattgaagaaaggccatgaaaaacaaaagttgtacatatattcctcttatcatcatgtga  19029800                                                                                              <------NtERF2                                                                                              <------                           --------->STY1(2)                                                  -------                         ------>ZmHOX2a(1)                                                   --------                      <<<<<<<<<ARR2                                                         ---------         --------->AHL20(2)<---------STY1(2)                                                <--------   --------->TOE2(3)  <<<<<<<<<ARR1                                            --------->ANAC58 ----ZmHOX2a(1)       <------ZmHOX2a(2)   <---------WOX13(1)             <-----------HVH21 ------>NtERF2 -ANAC55(2)     --------->TOE1(2)      <---------YAB1          --------->DAG2  --------->ANAC58 ============================HOX2a_HOX2a--------->ATHB12     ---------->DOF2   --------->ANAC46   ggaagcctcaaaaatataactacgatcctagctagtaagatgtgattgagtctaagagagtgagaaaggtgttttggtcacaaggaatggtgaggccgct  19029900                                                                                     <---------ANAC46                                                                                     <---------RAP2.6(2)                                                                                     <---------ANAC58                                                                                    <------NtERF2                                                                                <---------ANAC55(2)                                                                                =====================                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                                <---------bZIP60(1)                                                                                --------->ANAC55(2)                                                                                <---------O2                                                                                <---------ANAC58                                                                                --------->TGA1a                                                                                <---------TGA1a<-----                                                                                <---------bZIP60(2)                                                         ============================================                                                         =================================MYC_MYB   -                                                         <-------GAMYB          =====================                                                        <---------MYB46(3)      --------->bZIP60(1)<-                                                        <------MYB46(1)         --------->O2 <-------                                                        <------MYB83           ----------->bZIP910(1)                                                       <---------AtMYB61       ----------->STF1<-----                                                    <---------MYB46(3)        <---------TGA2(2)<-----                                                    <------MYB46(1)          ----------->HVH21 ====== ---At4g35610                                       <------MYB83             ----------->TGA1-------- -->At4g35610                                     <--------P           <---------WOX13(1)   --------- ->RAP2.6(2)                                      ========================================MYC_MYB---- >ZAT18                                        <---------TOE1(3)     --------->ATHB12<---------ANAC58 -ZAT18               ------>ZmHOX2a(1)        <---------TOE2(3)    <---------YAB1--------->ALFIN1 --   ctcttgcctaaacccaaactcttcctccgatttttgcagcatcatcttgaaggttggatggttgagggatgtgattgggatgacgtggcggtctctgaag  19030000    --------->ANAC46    <---------O2    --------->O2  <---------ALFIN1 ===========================bZIP_DOF ----TGA1a ====MYC_MYB -------->PCF5 ====bZIP_bZIP                    --------->bZIP60(2) --------PCF5                     --------->O2 --ZAT14                          --------->ANAC58                                                <-- ----O2--------->ETT(2)           <---------TGA1a                                              ------ ----bZIP60(2)                    --------->ANAC55(2)                                <---------At4g35610 ===========================bZIP_DOF         <---------MYB52(1)                      --------->At4g35610 ->ZAT14                          --------->ANAC58                    --------->ARR11(3)       ------ -->HVH21   --------->At4g35610<---------ZAT18                        <---------ARR11(3)  <----------DOF2 ----->ALFIN1    ===========================bZIP_DOF         ------->TEIL           --------->GLK1(2) ------->PCF2    ---------->DOF2  --------->TGA1a         --------->ANAC46          --------->ARR14(2)   tggcccacgtagacagcgaaatagcccttcttgggcacgtcttcttcgttgctcttcttcacgaagcttgaacatctcttcatcagcatctgctttagtg  19030100                                        <---------CCA1(2)       ------->TEIL                                      <---------DAG2        <---------------AtSPL8                                      <----------DOF2       --------------->AtSPL8       ------>ZmHOX2a(1)             --------->TOE2(3)------->TEIL      <---------ALFIN1           <---------ANAC58  <---------YAB1                        <---------AtMYB61 -------bZIP60(2)            <---------ANAC58      <---------ANAC55(2)       <---------At4g35610 ----->TGA1       <----------DOF2<---------ANAC58  <---------ANAC46          --------->At4g35610   <- ----->HVH21<----------DOF2  <---------ANAC58   <---------MYB52(1)         <-----------RAV1(2)-------   acgatgctcctcgtctttctctttgagtcttacttgcttcctttatctccattatgtatatttatgtactcttatatacaggtgaatgggtatggtgtca  19030200                                            <------ZmHOX2a(2)                                  ------                                           <---------ARR14(2)                                 <------                                           --------->AGP1                                  --------->AHL20(2)                                           --------->ARR14(2)                             <---------YAB1                                  <-----------TBP                   --------->YAB1   <------ZmHOX2a(1)                                --------->CCA1(2)                   <---------ICU4 --------->MYB59  - --------ARR11(3)              --------->ARR11(3)                --------->YAB1  --------->ICU4<----- ----->CBF<---------AHL20(2)   <---------ARR11(3)       <---------YAB1    <----------DOF2 <---------AHL20(2)   atatgtttttgtttattttgactccgatggagagatatatatacagatcgagcaagtgatgactgaataatcatgtctttggaattaggaatattattta  19030300                     --------->AHL20(2)                    --------->AHL20(2)             --------->ATHB12                             <<<<<<<<<GATA-1            <---------YAB1                         ------>ZmHOX2a(2)          --------->YAB1                          <------ZmHOX2a(2)          <---------ICU4                         <---------ARR14(2)                     --------->bZIP60(1)         --------->ICU4<------------CBF          <---------AGP1                         <---------bZIP60(1)        --------->AHL20(1)                       <---------ARR11(3)              <---------YAB1       --------->YAB1<---------AHL20(2)          --------->ARR11(3)        --------->AHL20(2) --->AHL20(2)-------->HAHB4                      --------->ARR14(2)        <---------AHL20(1) ---AHL20(2)--------->ICU4             ------------>CBF  <-----------GT1   <---------AHL20(2) ------- ---------->GT1<---------WOX13(1)--------->ZAT6  --------->AGP1            --------->AHL20(1)<------- ----AHL20(2)<---------ICU4   ----------->HVH21 <---------CCA1(2)   ------->TEIL <---------TOE2(3) <-   ttttgttaaaaataatgatggattaaattggtctgacactaaacaatatcagatctatttatctattttgaatctaattaattaagcttgatgtcatcat  19030400                                            <-----------HVH21                                           <---------O2                                           --------->O2                                           --------->TGA1a                                           ===================================================bZIP_DOF                                         <---------ALFIN1                                         ------->GAMYB                                        --------->MYB46(3)                                       ==============MYC_MYB                                <---------bZIP60(2)                             ----------->HVH21                            <---------WOX13(1)                           <---------ANAC46--------->ANAC58                           <-----------------AGL1                           <---------ANAC58--------->bZIP60(2)                                  -----      --------------->AtSPL8<---------------AGL15                                         ------>ZmHOX2a(1) -->YAB1                   <---------ANAC58--------->ANAC46                               <----------DOF2 --YAB1           <-----------GT1      -------->P                                   --------->DAG2 ------TEIL --------->YAB1 <---------AtLEC2--------->ANAC58--------->MYB46(3)      ---------->DOF2   attcattttttgtatcatatatactagttgcttgacatggcaaccacgtcaaaccgagacaacaatccctcataaatctgtctgaaaaagtccttttccg  19030500                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                          <---------AHL20(2)                                                                          <---------AHL20(1)                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                         --------------->AGL15                                                                         <---------------AGL15          --------->MYB46(3)                                            <-----------------AG         ------>MYB46(1)                                                <-----------------AGL3         ------>MYB83                               <---------YAB1    <---------AHL20(2)        =======================RAV                  <-----------GT1  <---------AHL20(2)        ----------->RAV1(1) --------->TOE1(2)     --------->YAB1     --------->AHL20(2)        --------->MYB52(1)  <---------ARR14(2)   <---------YAB1     --------->YAB1    <-----------GT1----------->RAV1(2)   <---------YAB1     --------->MYB52(1) ---->LBD16------->GAMYB    --------->ARR14(2) <---------ZAT6    <---------GLK1(2)   agggttttaccaacagacatcgcctgagaaaatacgatgttttcttatagtattatactagttaacagaattttaatttatttggaaatttgttagaatt  19030600                                                 <---------ICU4                                                --------->AHL20(2)                                                <---------AHL20(2)               <---------ZAT6                  <---------AHL20(2)        <---------ANAC46                    --------->AHL20(1)        <---------ANAC58                    <---------AHL20(1)     <---------AHL20(2)        <---------ANAC58              ----------->GT1             --------->AHL20(2)            <----   --------->HSFC1(2)            --------->ARR11(3)    <---------DAG2         --------->AHL20(1)<----   <---------HSFC1(2)            <---------AHL20(1) <---------AHL20(2)   <------ZmHOX2a(1)   <------- --------->ARR11(3)              --------->AHL20(1) <-----------GT1--------->AHL20(2)   --------->ANAC58 <---------ARR11(3)  <---------ZAT6  <---------TOE2(3) <----------DOF2  <----------ID1  --------->ANAC58   tgagatgtttccttgtagttttagtgttatacaaatattttggttatatattaattactttatttcaaattaataggacatatattagtgaagccatttg  19030700  Previous    Next  AGI:  At3g51200.1    Description:  auxin-responsive family protein. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G66260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48231.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 19029832    to: 19030152    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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