Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              -------->HAHB4                                                           <---------ATHB51                                                           <---------ATHB12                                             <---------AHL20(2)         --------->LBD16                                             <---------YAB1<---------YAB1                                           --------->CCA1(2)<--------ATHB1                                          --------->ARR11(3)--------->ATHB51                                 ----------->RAV1(1)       --------->ICU4                          <-                              --------->ANAC58           --------->YAB1--------->LBD16       <-------                              --------->ANAC46  <---------YAB1<---------WOX13(1)       <-----------RAV1(1)          --------->ANAC58    --------->ANAC58--------->YAB1--------->ATHB12           <---------REM1(1)          --------->ANAC58    --------->ANAC55(2)--------->YAB1        --------->ANAC46--------->ALFIN1   <---------TOE1(2)          --------->ANAC55(1)<---------AHL20(2)   --------->HSFB2a(2)   <--------   <---------TOE2(2)          <---------ANAC55(2)--------->AHL20(2)   <---------HSFB2a(2)   <--------   <---------TOE2(3)         <---------ZAT18 --------->AHL20(2)      <---------LBD16<---------AtMYB61 ------AHL20(1)           ------->GAMYB   <---------ARR11(3)<---------ICU4   <-----------GT1<--------   atacttaggtttacgcataagataacaacagcacgcaacatgaagatataattatatactaataattggtttcccgaaattacctagtggtgttgctttc  19028100                                                            ----------->RAV1(1)                                                            <---------DDF1                                                           ----------->HVH21                                                           --------->DEAR4(1)                                                           --------->At1g77200                                                           --------->DEAR3(1)                                                           --------->DREB2C(2)                    <---------ANAC46                      --------->DEAR3(2)                    <---------ANAC58                    <---------WRKY38(1)                    <---------ANAC55(2)                 <---------WRKY12                       <----- -----ZmHOX2a(1)    --------->ANAC55(2)               <-----------HVH21                 --------->At4g35610 ---DOF2            <---------ANAC58              <---------ALFIN1                  --------->MYB52(1) -ANAC58      <---------YAB1                  <---------ZAT18             --------->ANAC46<---------ZAT18 -ANAC58    --------->YAB1     ---------->DOF2<---------ZAT14       <---------At4g35610 <---------At4g35610 -ANAC46   --------->ICU4--------->MYB46(3)   --------->ZAT18       --------->At4g35610 --------->ZAT2   aggattgtgagcaattacgatggcgtaatcaccagaagccctagcgagagcaccacggtcaccgacatggagctcaacgttacagataacagctccctca  19028200                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                       --------->ATERF1(1)                                                                                       <---------At4g35610                                                                                       <------NtERF2                                                                                       --------->At4g35610                                                                                      ------>NtERF2                                                                                      <---------MYB46(3)                                                                                      <---------ATERF1(1)                                                                                      <---------ERF1                                                                                      <---------DEAR3(2)                                                                                     <---------RAP2.3(2)                                                                                     <---------RAP2.6(2)                                                                                     <---------DEAR3(1)                           ------>MYB83                                             <---------LBD16                           ------>MYB46(1)                                          <---------At4g35610                          --------->ORA47(1)                                       <---------ATERF1(1)      ------>ZmHOX2a(2)  --------->MYB46(3)                            <---------ZAT18<---------RAP2.3(1) <---------KAN4(2)      --------->DEAR3(2)                          <---------ANAC46--------->ATERF1(1) <---------WOX13(1)    <---------DOF5.7(2)       ----------->RAV1(1)--------->LBD16<---------RAP2.3(1) ------RAV1(2)       --------->DOF5.7(2)      <-----------GT1     <---------LBD16 <---------DEAR3(1)   gggattgatccaaggggaagaacgttaccgaccataagattagccttcttaccacagtagaggtattgtccggtgtacataccttcggcggctacgaaca  19028300                             --------->ANAC58                             --------->ANAC55(2)                             --------->ANAC58                        <---------ANAC46                           --------->MYB52(1)                        <---------ANAC58             <--                    ---------->DOF2  ----------->RAV1(1)             <---------MYB46(3)           <--                 <---------ANAC46 --------->ANAC58                 <-----------HVH21          ------>ZmHOX2a(1)                <---------At4g35610 ----------->HVH21         <---------ANAC46             <---------ATHB12                --------->At4g35610 --------->ANAC46          ----------->RAV1(2)         ------>MYB46(1)                <---------LBD16   --------->ANAC58         --------->ANAC46               ------>MYB83            <---------REM1(1)<---------ANAC55(2)           --------->ANAC58             --------->AtMYB61        <----------DOF2 <------ZmHOX2a(1)                  --------->ANAC58        <-----------HVH21      <---------At4g35610 ----------->HVH21              <---------ALFIN1   --------->ATHB12  <------      --------->At4g35610 ----------->TGA1         <------ZmHOX2a(1) <---------ANAC58   --------->MYB46(3)   gttccttctgcttcatgtagcggaaaggatgacggaacgcgacacgagcgagaggagcaccacggcctgggtcgtggatgatttcggtcaccaatccttt  19028400                                                                --------->ALFIN1                                                                ----------------------->TaNAC69(2)                                                              --------->ALFIN1                                                            <------MYB83                    <--------                                                            <------MYB46(1)               ------->TEIL                                                            <---------ANAC58             <---------ALFIN1                                        --------->ZAT2      <---------ANAC46           --------->DEAR3(1)                                        <---------ZAT2      <---------ANAC58           --------->RAP2.3(2)                                        --------->At4g35610<---------DEAR3(1)          --------->RAP2.6(2)                                  --------->ARR14(2)       --------->MYB55(2)        ------>MYB83                                --------->LBD16            <---------MYB46(3)        ------>MYB46(1)                               <---------HSFB2a(2)        --------->ALFIN1           --------->ZAT2                               --------->HSFB2a(2)        <---------MYB55(1)         --------->At4g35610                               --------->ANAC46           <---------ANAC46          --------->ANAC46       <---------MYB52(1)     <---------LBD16           <---------MYB46(3)        --------->MYB46(3)    <------------MYB.PH3(1)   <------NtERF2             --------->MYB55(2)      <---------ARR14(2)  --------->MYB52(1)        <---------ARR14(2)         <---------AtMYB61     --------->ANAC58 ----------->HVH21          --------->ARR14(2)         --------->ALFIN1      --------->ANAC58    ---- -------TOE2(3)   --------->LBD16 <---------ARR14(2)   <---------DEAR3(1)    --------->ANAC46<------- -------TOE1(3)  --------->ANAC46 <-----------ARR10 <---------ANAC46       --------->MYB52(1)<------- ----DOF2        --------->ANAC55(2)    <---------At4g35610--------->MYB111(2)  --------->ARR14(2)   gaggtaaccgtttcgctctccgtaatcgaggctccggaacttagctggacccttgcggtggtgggtgtgggacttgaaaacggaaccagccgcaccttta  19028500                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    --------->ANAC55(1)                                    ----------->GT1                                    --------->ANAC46                                    --------->bZIP60(2)                                    --------->O2                                    --------->ANAC58                     --------->YAB1               --------->ANAC58     --------->ANAC58                     <---------AHL20(2)               --------->ANAC58    ------>NtERF2                    <---------MYB52(1)   <---------ZAT18                <---------ALFIN1            <---------ANAC58   --------->ZAT18    <---------CCA1(2)     <-------TEIL      <---------ANAC58 -DAG2         --------->ANAC46--------->ANAC46           <---------ANAC58 ----->ANAC46  ----------->HVH21------>NtERF2             <-------GAMYB<-----------TBP --DAG2      --------->ANAC46<---------At5g28300          <---------ANAC58              --------->TOE1(3) ---DOF2  <---------ATHB12<----------DOF2--------->ICU4  <---------MYB46(3)             --------->TOE2(3)   cgctgtgccctaatcacacgacccatttctttaccgccacgtaatattcatcttcttcttggttgcatcccttatttataagcacaaaaaccctaaaatg  19028600                            --------->YAB1      ------>NtERF2                        ------>MYB46(1)        <---------PCF2                        ------>MYB83   <---------At4g35610                      --------->TOE2(3)<------NtERF2                      <---------MYB46(2)    <-----------RAV1(1)                      <---------MYB59 ------>NtERF2                                         <--------                      <---------MYB111(1)<----------DOF2                                 <---------MYB52(1)                    ------>MYB46(1)   <---------DEAR3(2)         <----------DOF2  --------->ANAC58                    ------>MYB83     <---------DEAR3(1)   <-----------GT1         --------->ANAC58              --------->GLK1(1)     --------->ATERF1(1)--------->ANAC55(2)     <---------ZAT14    ---------->DOF2 -------->P      <------NtERF2  <---------RAP2.6(3)         --------->ZAT14   ttttgtcaaagaacagaaaccctacctaattcatagtcgtcggcttatggggccttcatgtaaccttctttgtaaatagactgcaggcccagttatgtta  19028700                                                     <------------CBF                                                <---------YAB1                                                --------->AHL20(2)                                                <---------AHL20(2)                               <---                                             <---------DAG2                           <---------YAB1                      ------------>CBF       <----------DOF2              --------->KAN4(2)      ----                     >>>>>>>>>>>>>>>>>LFY <-----------GT1                <---------KAN4(1)       <---               <---------YAB1      ---------->DOF2  --------->ATHB51     --------->KAN4(1)      <---- -YAB1      <---------MYB52(1) <---------ANAC55(2) <---------YAB1      <---------GLK1(2)        -----   gaaatactggcccagttatgttaacccaatgttatgtaaaagttttactttttattattgtgtcaaaaattcagattattctatacttatatttgcattt  19028800       <--------P      <---------MYB52(1)    --------->LBD16   <---------ANAC55(2)   <---------ANAC46                                   --------->TOE2(3)            <---------ARR11(3)   <---------ANAC58                                  --------->ANAC58              --------->ARR11(3)   <---------ANAC58                                  --------->ANAC58             <---------CCA1(2)   <---------ANAC55(1)                    <----------DOF2                       <---------CCA1(2)  <---------LBD16                      --------->GLK1(2)                  <---------ARR11(3)     ---- ------YAB1                           --------->ARR14(2)                  --------->ARR11(3)   ------ ----->AHL20(2)                       <---------ARR14(2)         <---------At4g35610           <----- ------AHL20(2)             ---------->DOF2          <---------ANAC55(2) <---------GLK1(2)    ------- -----AHL20(2)           --------->AHL20(2)          ----------->GT1  <<<<<<<<<WRKY18     ---------->DOF2 ---->AHL20(2)         --------->YAB1 <---------GLK1(2)          --------->At4g35610 --------->TOE2(3)   taattacgggtatgtataacaactaaaataaaaagagacagattctttaatagaaacgtaaattgtatgctgtcaaaatctcatatatcttagaaagtgg  19028900                                        <---------O2                                        --------->TGA1a                          --------->AHL20(1)             <---------ANAC55(2)        --------->ANAC55(2)             --------->ANAC55(2)        <---------ANAC55(2)        --------->ANAC55(2)<---------AHL20(2)     --------->At4g35610                              --        --------->ANAC46  <---------AHL20(1)   --------->At4g35610                             <-----      <-----------GT1  <---------AHL20(2)      <---------At4g35610                             ------  ================================================bZIP_DOF                                    -------  <----------DOF2      --------->AHL20(2) ----------->HVH21                                   ------- --->TEIL    <---------ANAC58           --------->O2                                          ------- --->ZAT18   <---------ANAC58      ----------->HVH21                                         -------- ----ZAT18   ----------->GT1     --------->At4g35610                                         -------- -->ALFIN1<---------MYB52(1)     <---------At4g35610                       <---------YAB1    --------   acctctttatacgttacgttacaaattatatattttgctgacaagtgacagccgatgcaaaattgttgaactacattgttattccaattctatacaacca  19029000  Previous    Next  AGI:  At3g51190.1    Description:  60S ribosomal protein L8 (RPL8B). Identical to 60S ribosomal protein L8-2 (RPL8B) [Arabidopsis Thaliana] (GB:Q4PSL7;GB:Q9SD27); similar to 60S ribosomal protein L8 (RPL8C) [Arabidopsis thaliana] (TAIR:AT4G36130.1); similar to unknown [Populus trichocarpa] (GB:ABK94183.1); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Ribosomal protein L2, domain 3 (InterPro:IPR014726); contains InterPro domain Ribosomal protein L2; (InterPro:IPR002171); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR0160 Range:  from: 19027585    to: 19028526    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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