Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------>ZmHOX2a(1)                                                                    <------NtERF2       --------->ANAC58                                                                  <---------ANAC58      --------->ANAC46                                            <---------DAG2        <---------ANAC58      --------->ANAC58                                            <----------DOF2 <---------ANAC46        --------->PCF5                                     --------->ATHB12       <---------ANAC58       --------->PCF2  <---------TOE2(3)                 <---------ZAT6          <---------ANAC58   <-----------RAV1(1)   tacaaaggtttgaattcaacttagattgcaaagacttagtgatgggccttatggatgagattacttgggcgtccttgagaattgtggcccacgaagttca  19021400              <-------TEIL           <------ZmHOX2a(1)             <-----------GT1      --------->ATHB12              <---------ANAC58         <---------ANAC46     <---------YAB1                 <---------ANAC58         ----------->GT1     <---------ZAT6      --------->ARR14(2)                <---------ANAC46                      ---- --------->ARR11(3)      <---------ARR14(2)             <---------YAB1                         ------   agagatactgataggatacattcgacgtattccccatttcgttttacattttaagatgatgatgtgtgaaactagttaagaagggttcttcttagtccta  19021500         <---------TOE2(3)        ---------->DOF2             <---------ANAC46                                        <--------      <---------YAB1                <---------ANAC58               <---------ICU4          <---------YAB1 ----------->GT1                    <---------LBD16               <---------YAB1           --------->ICU4 ------>DOF2                        <---------ANAC58            --------->YAB1           --------->YAB1 >ZmHOX2a(1)                 ---------->DOF2     --------->YAB1--------->ICU4       --------->AHL20(2)   aaagagttattaaagtttttttaaaactctataaagtttcgggcttcttaataataaacacagaaatgataatggcacttaaaaaaaaaaatcataattc  19021600                                        <--------ATHB1                                       <---------ATHB51                                       <---------ATHB12                                    <---------------AGL15                                    --------------->AGL15                                   ----------------->AGL3                                   ----------------->AGL2                                   ----------------->AGL1                                   <-----------------AGL1                                   <-----------------AGL3                                     ------>ZmHOX2a(1)                                   <-----------------AGL2                                 --------->ARR14(2)                             <---------ICU4                                               --------->ARR11(3)                             -------->ATHB1                                               <---------ARR11(3)                             --------->ATHB12                                         --------->YAB1                             --------->YAB1                                           <---------ICU4                            --------->ICU4                                           ------------>CBF                            <---------ATHB12                                         <---------ATHB12    <---------GLK1(2)     --------->YAB1<---------ICU4      --------->AHL20(2)     --------->WOX13(1)    --------->ARR11(3)    <---------ICU4--------->YAB1      <---------AHL20(2)<---------TOE2(3)     -    <---------ARR11(3)   --------->ICU4--------->ICU4 <---------ANAC58       ---------->DOF2 --------  <---------TOE2(3)      <---------ATHB12             <---------ANAC58   --------->GLK1(2)<---------ARR14(2) -ICU4    ----------->HVH21 <---------YAB1     <---------YAB1   <-----------GT1----------->GT1<------   tcttaagattttctgaccaattgtccaataatcattgtccaataatggtattatttgcttatttttttactacataatctaaagttaatcaatatccttt  19021700                                                                                                   --                                                                                                  <--                                                       --------->YAB1                            <---        --------->YAB1                                <---------AHL20(2)                         <---        -------->HAHB4                               --------->AHL20(2)                          ----        <---------ICU4                   <---------ANAC58                                        ----       --------->ICU4                    ----------->GT1  --------->AHL20(2)                     <---     --------->YAB1                      <---------ANAC58 <---------AHL20(2)         ---------->DOF2    <---------ATHB51                     <---------ANAC46 --------->YAB1            *TSS         <---    <---------ATHB12          <---------DAG2       <---------AHL20(1)      ---------->DOF2       <--- ----------->CBF              <----------DOF2      --------->AHL20(1)     =========================== ->TOE2(3)   <----------ID1<-----------GT1        --------->AHL20(2)      =========================== ----DOF2  --------->YAB1<-----------HVH21    --------->AHL20(2)          ------>ZmHOX2a(1)      ----   aatccaataataatgacaacaaaactgtgtcacttttctagtggggtataaaatatataataatatggctcttctcctaaagtactgcaaagagaagaag  19021800          ----------->RAV1(1)        ------>NtERF2       --------->ANAC58       --------->ANAC58       --------->ANAC46     <---------DOF5.7(2)    --------->WRKY38(1)    --------->WRKY12    ----------->HVH21   --------->DOF5.7(2) ---->ZmHOX2a(2) ----ZmHOX2a(2) ------AGP1 ------ARR14(2) ----->ARR14(2)                                                --------->CCA1(2) ----->ARR14(3)                                               --------->ARR14(2) --------ARR10                                     <---------ZAT2<-----------GT1 ------ARR14(3)                                    --------->At4g35610 ------ARR11(3)                        <---------At4g35610    <---------ARR14(2)       XXXXXXXXXXXXXX ====HOX2a_HOX2a                       --------->At4g35610    --------->ARR11(3)  ------>NtERF2 =====HOX2a_HOX2a   <-----------GT1--------->ARR14(2)         <---------ARR11(3)  <---------At4g35610 ----->ARR11(3)--------->AHL20(2)  <---------ARR14(2)     <------ZmHOX2a(1)       --------->At4g35610   atctcgttgacgccccaaaaaataaccagaggtaatggttccgcttccatgggagctagaggaagatatactgtctcgacttgcagcccaatctcttgtt  19021900          <---------MYB52(1)       ------>ZmHOX2a(2)                                                 <---------ANAC58       <-------TEIL                                                      <---------ANAC58      <------ZmHOX2a(2)                                               ------->MYC2     <---------ARR14(2)                                               <-------MYC2     --------->AGP1                      ---------->DOF2              ------->MYC3     --------->ARR14(2)        <----------DOF2                        <-------PIF5             <-----     <---------GLK1(2)      --------->ARR11(3)                        ------->PIF5            -------    <---------At4g35610     <-----------GT1                           <-------MYC3          <-------- XXXXXX>MIR837-5P           <---------ARR11(3)   <-------TEIL   --------->ZAT14 ------>ZmHOX2a(1)   cgattcagatccgtttgcaaacgatggaattatcttttcgatgaaaagagtttcatcaaaaaccacttcgctcgtgcttgtcctcagttcatcttcatga  19022000                                                --------->TOE1(2)                                               =====================================HOX2a_HOX2a                                               --------->MYB46(3)                                               ------>ZmHOX2a(2) --------->ZAT18                                           --------->WRKY12   <---------TGA1a                    <---                                        <---------DEAR3(1)    <---------ANAC58               <-------                                        <---------ANAC46      --------->TGA1a               <--------                                       <------NtERF2          <---------O2                  ---------                                      ------>NtERF2           <---------ANAC46              <--------                                     --------->ANAC46         --------->ANAC55(2)          ----------                                     <---------DEAR3(1)       <---------ANAC55(1)          ----------                                  ----------->HVH21<---------ATHB12                        <---------                        <------ZmHOX2a(2)  --------->WRKY38(1)--------->O2   ------>ZmHOX2a(1)------- ----WRKY18(1)         <---------ARR11(3)<-------GAMYB        <---------ANAC55(2)         <---------At5g28300 ---->HVH21            --------->ARR11(3)===============================MYC_MYB   <---------GLK1(1) -ICU4     <---------AHL20(2)    <---------HSFB2a(2)          <---------ANAC58    --------->GLK1(1)--   ccgattccaatatttattcgatagagatcatcggtctcgacggcgttgatccaacgattaagttacgtgtgctagactcctctggtatcccttaccgtga  19022100 ------ANAC46 ----HVH21                                                                                --------->LBD16 -ANAC58<---------ANAC58  <---------ANAC58                                               <---------ANAC46 ------>AGL15      <-----------HVH21                                                     <---------ANAC58 -ANAC58<---------ANAC58  <---------ANAC58                                               <---------ANAC58 ------->AG --------->ANAC55(2)                                               <----------DOF2<-------GAMYB ------->AGL1     ------->GAMYB                  <-----------GT1              <---------DAG2<-------- --------AGL1     --------->YAB1       <---------ANAC58                     <---------At4g35610 ---->HVH21 <---------ANAC55(2)        <---------ANAC58           ------>ZmHOX2a(1)   <---------ARR14(2) --------->GT1   --------->MYB46(3) <------------------------ANAC81--------->MYB52(1) --------->ARR14(2)   ctggaaatttgcttacataaccatcactgcttgcgatgggttcttgttttgtaactcttgggctagtcctaaggggacagctttttggaatccgtggttg  19022200                                                            --------->YAB1                                                      --------->CCA1(2)                             <---------TOE2(3)       <---------ARR14(2)                           ---------->DOF2           --------->ARR14(2)                <---------ARR14(3)                        <------ZmHOX2a(1)           <------ZmHOX2a(1)                  --------->GLK1(2)                    <---------TOE1(1)             <---------TOE2(3)                    --------->ARR14(3)               <---------------AtSPL8          <---------ANAC46           ---------->DOF2              =================HOX2a_HOX2a     <---------ANAC58        --------->ANAC58--------->ARR11(3)  ----------->GT1   <---------TOE2(1)          <---------ANAC58        --------->ANAC58<---------ARR11(3) -MYB46(3)    ------>ZmHOX2a(2)           <-----------RAV1(1) --------->ZAT6--------->DAG2          <   aaacaggttaaatggatcgagtacgaggataaaggtttcaatgtctgtggcttaggatacgataatactagagacggaaaggtttacaaaatcttggggt  19022300  Previous    Next  AGI:  At3g51171.1    Description:  Identical to Putative F-box protein At3g51171 [Arabidopsis Thaliana] (GB:Q1G3N6;GB:Q9SD29); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G16555.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80717.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 19021784    to: 19022987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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