Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->AHL20(2)                                              <---------AHL20(2)                                             --------->AHL20(2)                                      ------>ZmHOX2a(2)                                     --------->GLK1(1)                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                                    <---------ARR14(2)                            --------->ATHB12 <---------AHL20(2)                         <---------TOE2(3)                   --------->ALFIN1 --------->ARR11(3)                                --------->AHL20(2)                  <-----------HVH21 --------->ARR14(2)                       <---------DAG2 ---------     ----------->GT1        <---------ICU4   --------->AHL20(1)             --------->At4g35610    <---------------AtSPL8 --------->ICU4    <---------AHL20(1)           <-----------GT1  --------->ARR11(3) ---------->DOF2 <---------O2       --------->AGP1 <------MYB46(1)       ---------->ID1---------->DOF2 ------>GT1      --------->O2       <---------AGP1 <------MYB83         <-----------HVH21  <---------ARR11(3) --->ANAC58      <---------TGA1a   <---------CCA1(2)               <---------AHL20(2) <---------AHL20(2) --->ANAC58      --------->TGA1a   <---------At4g35610      ----------->GT1 <---------At4g35610   gaaaaaagagtacaatccaacgtgagggaatgatttcagatctcaaatttatttggttagagtgcttaaatatttgtcaccttacaaattaaagatttct  19004700                               --------->ANAC46        --------->At4g35610                             ------->GAMYB             <---------At4g35610                             --------->TOE2(3)  <---------ANAC55(1)                            --------->MYB46(3)  --------->ANAC55(2)                --------->ATHB51                      <---------YAB1            <---------ANAC55(2)                <---------AHL20(2)                    --------->YAB1            <---------AHL20(2)                   --------->AHL20(2) --------->ANAC58  --------->ICU4         --------->ICU4                      <---------YAB1        < --------->ANAC58  <---------ATHB12       --------->AHL20(2)         <---------ANAC55(2)            < --------->ANAC46 <---------TOE2(3)       <---------AHL20(2)         --------->ANAC55(2)<-----------GT1 >GLK1(1)      <---------MYB52(2)    ----------->GT1   <---------ZAT14     <---------AHL20(2)   -----   aacacacaatcttctcaactaatgatgttaaccacaaaaccgtattaattaagtgtctgcagaacaacatcacataatttatgaattatttaacaaaaca  19004800                --------->ATHB51                <---------ICU4                                              <---------At4g35610                --------->AHL20(2)                                          <---------ZAT2                <---------AHL20(2)                                          --------->At4g35610       --------->ARR11(3)      <---------------AtSPL8                       --------->ZAT2       <---------ARR11(3)      --------------->AtSPL8                   <------MYB46(1)      <---------CCA1(2)    ---------->DOF2                              <------MYB83 ---------TOE2(3) <---------YAB1                                       --------->MYB46(2)        <--- ---------ANAC55(2) <---------AHL20(2)                                <--------P                 ---- ---->TOE2(3)  --------->ICU4--------->DAG2   <-----------GT1 --------->YAB1<------NtERF2   ---------   ttaagtatatatctctaattatttttttgaaaaggtgtacatttttagtaaccagagaacaaaattgtaatggtaggcagctagagcatatttttcatat  19004900                                                                                                  <--                                                 --------->ATHB51                                 <--                                                 <---------ICU4                       <---------YAB1-                <---------WRKY38(1)              --------->AHL20(2)                 <---------AHL20(2)                <---------WRKY12                 <---------AHL20(2)                <---------AHL20(1)             ----------->GT1         --------->TOE2(3)                             <---------AHL20(2)          <---------AtLEC2          --------->At4g35610                            --------->AHL20(2) ------------AtSPL8            --------->ATHB12 <---------AHL20(2)                 --------->AHL20(1) ----------->AtSPL8            <---------ICU4   --------->ICU4              <---------ANAC46     ---- >YAB1  <-----------GT1 <---------ICU4    <---------WOX13(1)                ----------->GT1     <----   ttgtacatttttacatggtcaattggtcattactcattagcttaattgaaattatttctgcctatatagcttaatttttcgtaaatttattagagggagt  19005000                      <---------------AtSPL3                      <---------------AtSPL8                      --------------->AtSPL3                   <------NtERF2                  <---------MYB46(3)                                       <---------At4g35610               <------MYB83                                                --------->At4g35610              <---------AtMYB61                       ------->GAMYB       ----------->RAV1(1)              <---------MYB46(3)                     <---------MYB55(2) --------->SPL7    <---------AHL20(2)--------------->AtSPL8<-----------HVH21   ----------->HVH21 ----------->GT1 --------->ALFIN1          <------MYB46(1)  <---------ALFIN1  ---------->DOF2 ----MYB83 --------->ATHB12                <------MYB83-------->P       <---------ZAT14 ----MYB46(1)<---------WOX13(1)           --------->MYB59------->GAMYB--------->LBD16 ---------->GT1<------MYB46(1)    --------->ARR14(2) --------->MYB46(3)--------->ALFIN1        <----- ----->MYB111(1) <---------ANAC46 <---------ARR14(2) <---------MYB111(2)--------->ZAT14  ---------->DOF2 ----P    <---------YAB1       --------->YAB1--------->WRKY18(1)--------->ANAC46    ----------->GT1 -   aggtgttaaattctgattggtggggaagtaccatcatatatggataggtcaaacaacaacccaaacccgacccgtgcagcaaaagtttgtaaaaagagga  19005100         --------->DEAR3(2)       --------->ARR14(2)       --------->TCP16(1)       --------->TCP11(2)       <---------ARR14(2)       --------->PCF5       --------->TCP20       <---------PCF2                   ----------->GT1      <---------TCP16(2)                --------->ANAC58                                 ----------->RAV1(1)     <---------ZAT18                    --------->ANAC58                               ------>ZmHOX2a(2)     --------->ZAT18                  ---------->DOF2                         <------ZmHOX2a(1)    --------->ALFIN1               --------->YAB1                             ================HOX2a_HOX2a --------->DAG2                 --------->GLK1(1)           <---------YAB1   --------->LBD16 -ZmHOX2a(1)           --------->ARR14(2)               <---------ANAC46   <---------LBD16 --------->DOF2     *TSS        <---------GLK1(1)  <---------GLK1(2) <-----------------AGL1--------->MYB46(3)   actaaagtggacccgacttaattcagaacttcagaaatcagaaagcaaaaacagaattgtgtattattctcttctattcaggaaattgatccaacaaatg  19005200                                                                          --------->DEAR3(1)                                                                         --------->ERF1                                                                         --------->RAP2.3(1)                                                                         --------->ATERF1(1)                                                                         ----------->HVH21                                                                         <---------ABI4(2)                                                                         <------NtERF2                                                                        <---------ATERF1(1)                                                                        <---------RAP2.3(1)                                                                        ------>NtERF2                                                                       --------->ANAC58                                                                       <---------DEAR3(1)                                                                       --------->RAP2.6(2)                                                                       --------->PCF2                                                                       --------->ANAC46             <                                                                       --------->ANAC58             -                                                                      --------->ZAT18              <-                                                                      <---------PCF2               <-                                                               ------>NtERF2                       --                                                              --------->DEAR3(1)                  <--                                                              --------->DREB2C(2)                 <--                                                             --------->ATERF1(1)                  ---              ------>ZmHOX2a(2)                              --------->MYB46(3)                  <---              <---------DEAR3(1)                             --------->ERF1 <------NtERF2       -----             <------ZmHOX2a(2)                               --------->DEAR4(2)                 -----            --------->ARR11(3)                               --------->ORA47(2)               <------            <---------ARR11(3)                               --------->DEAR3(2)            <---------            <---------ARR14(2)                               --------->RAP2.3(1)       ------>ZmHOX2a(2)            --------->ARR14(2)                              <---------ATERF1(1)       <---------GLK1(1)      <---------HSFB2a(2)                                 <---------ABI4(2)------>NtERF2   <---------SPL7      --------->HSFB2a(2)                    --------->ANAC46<------NtERF2<---------ALFIN1--------->ANAC46   aaagattactcgaagatcggcgataaacttgtgatgcagagacctagacgacgtttggaaggcaccgccatgggcgccaccgtgttcgatctccgtcccg  19005300      <---------At4g35610      <------NtERF2      --------->At4g35610   <------NtERF2  <---------DEAR3(2)  ------>NtERF2 <---------DEAR3(1) ------NtERF2 -------->ATERF1(1) --------ATERF1(1)                                --------->ATHB51 --------SPL7                                    --------->ICU4 ---->NtERF2                                  <---------YAB1                        <---------HSFB2a(2) -------DEAR3(1)                             --------->ARR11(3)             <---------HSFC1(1) -------ANAC46                    --------->GLK1(2)                         --------->HSFC1(1) ------>DEAR3(1)                 <---------GLK1(2)<---------ICU4      --------->MYB52(2) ---NtERF2                     <---------ANAC58  <---------YAB1     <---------MYB52(1)    <------ZmHOX2a(1) ---->LBD16             --------->At5g28300  <---------ARR11(3)    --------->TOE2(3)--------->HSFB2a(2) ->NtERF2      <-----------------AGL1       --------->YAB1    <----------DOF2       <---------HSFC1(1) ---LBD16    <----------DOF2   <---------ANAC58--------->YAB1 <---------DAG2--------->HSFB2a(2) --HVH21----------->HVH21     <---------------------WRI1 <---------At4g35610<---------HSFB2a(2)   gcgtcggcatcggacctttctctatcggtaattgcgattctctcaaatatcataatttctgctacttttcgttagtttctagaattcgagaaggagtatc  19005400                 <---------ARR14(2)                 --------->ARR14(2)             <-----------------AGL1                    --------->ANAC55(2)       <---------ANAC58                                <---------ANAC46       <---------ANAC46                                <---------ANAC55(1)       <---------ANAC58                                <---------ANAC58      ------>NtERF2                                    <---------ANAC55(2)   <---------At4g35610                                 <---------ANAC58   --------->At4g35610   --------->HSFB2a(1)  ------>ZmHOX2a(2)       <---------GLK1(1)            <-  --------->ANAC46       <---------HSFB2a(1) <------ZmHOX2a(2)        --------->GLK1(1)            --   atctacgctgcgtctatcggatttggaagattgcaaatcgatttgcgatcggagattgcgtgttgttttgggaattctttgaaaacatcgcgatgaagtt  19005500             <---------ANAC46        <---------ANAC58        <---------ANAC46           <----------DOF2        <---------ANAC58         <---------YAB1                             <---------At4g35610        <---------ANAC55(1)   <------ZmHOX2a(2)            --------->MYB52(2)                     --- --------HSFB2a(2)     <-----------RAV1(1)               <---------MYB52(1) --------->At4g35610  <--- ------->HSFB2a(2)  --------->MYB52(1)               <---------ANAC46   <----------DOF2  <---------At4g35610   tctcgagattgcgtggtttagataactgttggatcatctttagtaatagcaaatgctgtgttagttttttagttctttagcagactgtttcatcttccga  19005600  Previous    Next  AGI:  At3g51130.1    Description:  Identical to UPF0183 protein At3g51130 [Arabidopsis Thaliana] (GB:Q9SD33;GB:Q53YG9;GB:Q8LD70;GB:Q94C31); similar to unnamed protein product [Vitis vinifera] (GB:CAO48256.1); similar to Os06g0714000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058570.1); contains InterPro domain Protein of unknown function UPF0183 (InterPro:IPR005373) Range:  from: 19005120    to: 19008568    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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