Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC58              <---------ANAC46              <---------bZIP60(2)        --------->ARR14(2)        --------->GLK1(2)        <---------ARR14(2)        ------->TEIL     <---------YAB1   --------->CCA1(2)  --------->ARR11(3)  <---------ARR11(3)                                                                         <------- ---------->ARR10                              <---------TOE2(3)                             -------- ---->At4g35610                               --------->MYB52(1)                 <-----------HVH21 -----At4g35610 <------NtERF2          <---------YAB1        <------ZmHOX2a(1)<---------ANAC58 ---->ZAT2    <---------ANAC58      --------->GLK1(2)      --------->ALFIN1   <---------ANAC58   ctgagatatgaatctggcgtggaattgtctgaacgaagaatatgatactaacgatgaagaagaggagcgaaactcttgagtcttgtcaaatgctggattt  18990600          --------->ARR11(3)                                                       --------->RAP2.6(2)          <---------ARR11(3)                              <---------ANAC58       --------->At4g35610       <---------KAN4(2)         <---------At4g35610      <---------ANAC58       <---------At4g35610    ------->GAMYB   ----------->HVH21                  --------->TOE1(2)        --------->ANAC58 --------->MYB52(1) <---------ETT(2)               --------->ANAC46 <---------ARR11(3) <-----------GT1    --------->ETT(2)           ------>ZmHOX2a(1) <------NtERF2  --------->ANAC58 --ARR14(2) ------>ZmHOX2a(2)    ----------->RAV1(2)  <---------ANAC58      --------->ANAC46  ------- ->ARR14(2)--------->At4g35610   --------->At4g35610  <---------ANAC58      --------->ANAC55(2)   gaataaccgaatgatctgagagtcgacaggtttacacctgaacttgttcctccaagtcgtgcgagtcggagataattcgcgtaagcagccataaaaaaaa  18990700                    <---------ANAC46            --------->LBD16           <---------------AGL15           --------->ANAC46                                                    <---------MYB52(1)           --------->LBD16  --------->MYB52(1)                                <-------GAMYB          ----------------->AG                                         <---------GLK1(1)          <---------HSFB2a(2)  ----------->GT1                         --------->GLK1(1)          <--          <-----------------AGL1                                    --------->LBD16               ---          <-----------------AG--------->ANAC58                     --------->HSFB2a(2)          <----          <-----------------AGL3                                   <---------HSFB2a(2)         ------          <-----------------AGL2                     ------->GAMYB------>ZmHOX2a(2)       <------ZmHOX2a(2)          ----------------->AGL1                   -------->P     <---------LBD16         ===========      <----------DOF2 ----------->GT1           <---------ATHB12<---------ARR14(2)       --------->ARR11(3) --->DOF2 --------->HSFB2a(2) --------->ANAC58--------->WOX13(1)--------->ARR14(2)       <---------ARR11(3)   gatgaaaactttcccgaaattggtttgtaaaaacggaaactttgaattcaatcaacccaaaatttggatcgggaaatcgccgttggaagaagatcaataa  18990800                             --------->ANAC58                             --------->ANAC58              --------------->AGL15              <---------------AGL15             <-----------------AGL1                                            --------->KAN4(1)             ----------------->AGL1                                            <---------KAN4(1)             ----------------->AGL2                                         <------ZmHOX2a(1)    ---------->DOF2      --------->ANAC58                             <---------ANAC46 ----ZmHOX2a(1)          --------->ANAC58       ----------->GT1       <------MYB46(1)            <--- ------>YAB1 <-----------------AGL2        ---------->DOF2            <------MYB83              ----- -----TOE2(3)<-----------------AG     ----------->GT1                <---------MYB46(3)         <---- --->YAB1    ----------------->AG     <---------MYB46(3)             --------->MYB46(2)      -------- ====HOX2a_HOX2a       <--------P <---------AtMYB61                  <---------AtMYB61 <---------YAB1   ggataacaaagagtttcccaatcgggtaagcatgcaatggtggtcaaaagaagaaaaatttgaagatgggtttggtgaggattgttcttatgaaggtggt  18990900                                                                                                    <                                                                                                    -                                                                                        <------------                                                                                        -------------                                                                                       <-------------                                                                                       --------------                                                                                       --------------                                                                                       <-------------                                                                                      ---------------                                                                                      <--------------                             ----------->RAV1(1)                                      ---------------                            --------->ANAC46                                       <----------DOF2  -                           --------->LBD16                                         *TSS--------------                         <---------LBD16                                     <----------DOF2        <                       <---------ARR14(2)                                <---------ANAC58           -                    <---------TGA1a                                      <---------ANAC58          --                    --------->ANAC46                                    --------->SPL7<--------------     --------->AtLEC2  --------->ARR14(2)                 --------->YAB1<-------TEIL  --------------- --------HVH21      <---------O2                         <---------YAB1--------->ALFIN1-------------- ---->bZIP60(1)     --------->TGA1a               --------->SPL7     <---------ANAC58 --------------- -----bZIP60(1)     --------->O2                <---------SPL7       <---------ANAC58 <-------------- ->ALFIN1<---------GLK1(1)--------->ANAC46   --------->MYB52(1)  ---------->DOF2 ---------->ID1    --   gtcatccatggaaatcgcttagacgtctccgcaccatcaaatgaaacagacggacgacgatgatagagaaagcgtgcgtctttgtctttccctaaatggg  18991000                                                                                             <-------     ------------>CBF                                                                        -------- -------MYC3                                                                                 <------- -------------->ANT                                                                         <-------- ---AGL15                                                                                   <-------- -->AGL15                                                                                   --------- ----AGL1                                                                                   --------- --->AGL1                                                                                  --------->YAB1 ->AGL15                                                                                  <---------YAB1 --AGL15                                                                                 --------->AHL20(2) -->AG                                                                                  --------->AHL20(2) ---AGL3                                                                                <---------AHL20(2) -->AGL3                                                                               <---------YAB1 ------>MYC2                                                                           --------->ICU4 --->AGL2                                                                            --------->YAB1 -------MYC2                     <-------MYC2                                       <---------YAB1 ------>MYC3               --------->ANAC46                                         <---------AHL20(2) ------->ANAC58       --------->ZAT6                                              --------->YAB1 ---AGL1            <-----------GT1         --------->ZAT6                      --------->AHL20(2) -->AGL1        --------->AHL20(2)       <---------ICU4                         <-----------TBP --->AG         <---------YAB1   ------->MYC2                                 <---------RVE1(1) -->AGL2        <---------AHL20(2)   --------->ICU4                          --------->ARR11(3) ---AGL2       --------->AHL20(2)<-------MYC3                                <---------GLK1(2) ------->ANAC58<---------AHL20(2)------->MYC3                 <---------WRKY18(1)<---------YAB1   cacgtttcccaattcattttaattactctactccatgtgctaattatctctaaattcccaaacttgaccatgagtttcagatttttataattaatataat  18991100 --AHL20(2) ->AHL20(2) --YAB1 -AHL20(1)                  --------->ARR11(3) -AHL20(2)                  <---------ARR11(3)                         --------->GLK1(2) >AHL20(2)                 --------->CCA1(1)                          <---------GLK1(2)             < >AHL20(1)                 --------->RVE1(1)               ---------->DOF2                ---------->DOF2   taagctctgtttcagtaagagaaacacaaatatctacaagtttgatatgttagcatttgtgtaaagaacagagaatctatgagtaaatgttgtaaagcag  18991200                                                                                               ------                                                                                  --------->ATHB12                                                                                --------->TOE2(3) <--                                                                              ------->TEIL  <--------          <---------YAB1                                                --------->DAG2    --------->CCA1(2)       <---------AHL20(2)                                              ---------->DOF2   --------->ARR14(2) -------TEIL                                                    --------->ANAC55(2)      <---------ARR14(2)   agttcatattttatgtttagtcttcaccatgaagaacaaagtcttagaaatgttttgatatttcatatgtaataaaagtgaacctcattgggatatgaat  18991300                        <---------------AtSPL8                        --------------->AtSPL8                       <------MYB83                             --------->YAB1  --------->ZAT6    <------ZmHOX2a(1)            <---------ANAC46                                 <-- <---------YAB1   <---------TOE2(3)              <---------ANAC58                           <-------- ->TEIL      <---------ARR14(2)                  <---------ANAC58                        <---------AHL20(2) -------YAB1 --------->ARR14(2)      <----------DOF2--------->At4g35610     <---------AHL20(2)<------ -YAB1---------->DOF2  <------MYB46(1)      <---------bZIP60(2)<---------ATHB12          --------->AHL20(2)   attatcagtaaaccagaactgaggaaggtgtacatattactttgggacatggcctgcttaaacaaatcatacagccattttttttgttgattttattatt  18991400                                                 <---------ANAC58                                                 <---------ANAC58                                                 <---------ANAC46                                               <-----------HVH21                                              ------>ZmHOX2a(1)                         <-----------HVH21<---------ARR14(2)                        ----------->GT1   --------->ARR14(2)                     --------->DAG2       --------->ARR11(3) <---------YAB1     ---------->DOF2      <---------CCA1(2)      <---------AHL20(2)  <---------ALFIN1 -------YAB1 <---------ARR14(2)    <---------ARR11(3)   <---------DREB2C(2) <-------GAMYB   <-------- -YAB1       --------->ARR14(2)    --------->ARR11(3) <-----------HVH21    <---------MYB46(3) ---AHL20(2) --------->GLK1(2)   <---------TOE2(3)   <-----------RAV1(1)   --------->MYB52(2)--------   ttgatgattcaagagaatccaaaaaagtgtcaaataagatttcatatcctgtcgtctgtcggtcattttttttgggtttgttgtctccacatctaatgta  18991500  Previous    Next  AGI:  At3g51090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48264.1); contains InterPro domain Protein of unknown function DUF1640 (InterPro:IPR012439) Range:  from: 18988968    to: 18990983    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51100.1    Description:  similar to hypothetical protein OsI_023576 [Oryza sativa (indica cultivar-group)] (GB:EAZ02344.1) Range:  from: 18991243    to: 18993271    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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