Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->LBD16              ------>NtERF2             ------->GAMYB             --------->ANAC46             --------->ANAC58             --------->ANAC58                      --------->ANAC46            --------->MYB46(3)                   --------->ANAC58            <---------MYB55(2)                   --------->ANAC46                          <---------          ------->GAMYB                          --------->ANAC58                       <---------ICU4         <---------ALFIN1   --------->ZAT6<---------YAB1 <-------TEIL        ---------->DOF2     ----   cagcataaacaacacccgcctaagaagattacactaactccattctgaatcacacaacattcatctctaatttcacaaacaaagcatcaatttttacaac  18958700                                                                            ------>ZmHOX2a(1)                                                                         ---------->ID1                                                                      <----------DOF2                                                                     ==============HOX2a_HOX2a                           --------->YAB1                            ------>ZmHOX2a(2)                           ------->GAMYB         <---------LBD16   <---------AGP1                          --------->MYB46(3)    ----------->RAV1(2)<---------ARR11(3)                        --------->WOX13(1)     --------->GLK1(2)   <---------ARR14(2)              <---------At4g35610              <---------ARR14(2)  --------->ARR11(3) --GT1        --------->At4g35610              ------->TEIL        --------->ARR14(2)             <-- --->GAMYB   ------->TEIL-------->P     ---------->DOF2           <---------CCA1(2)    <-----------HVH21   cccagactaaaaatgaagctcaaaatcaaccatcaaacacaaaatagcgaacctggaggtttcaatttggatcttttcctcttgggatgagtcatgggtc  18958800          --------->ATERF1(1)          <------NtERF2         --------->At4g35610         <---------At4g35610                                                                    <----     --------->HSFB2a(2)                                                                  --------->DEAR3(1)     <---------HSFB2a(2)            --------->YAB1                                       --------->ANAC46    <---------LBD16                <---------YAB1                                   --------->ARR14(2)   <---------LBD16   --------->WRKY18(1)                            --------->TOE2(3) --------->MYB46(3) -------CCA1(2)    --------->WOX13(1)                               --------->TOE1(3)<------ZmHOX2a(2)   gtctcttcgggagccgagtatcagtcaagcttaagctatgaaaatggttagccattggaatccatggtaacctcaaatgagtcatcgatccaccgaagaa  18958900                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC58                                                              --------->ANAC58                          <---------HSFB2a(1)                 --------->ANAC58                        --------->ARR14(2)             --------->DOF5.7(2)<---------MYB52(2)                        <---------GLK1(2)    --------->DEAR3(1) <------NtERF2                        <---------ARR14(2)  <------NtERF2     <---------DEAR3(1)                       <------NtERF2        <-----------RAV1(2)<---------DEAR3(2)                     --------->RAP2.6(2)    --------->ATERF1(1)------>NtERF2                  -------                    <---------LBD16        ------>NtERF2 <---------DOF5.7(2) <---------TOE1(3)-------                   --------->At4g35610     <---------ATERF1(1)--------->bZIP60(1)    <<<<<<<<<<<<<<<<                --------->At4g35610        --------->At4g35610--------->ANAC46 <---------GLK1(2)                <---------At4g35610       <---------ANAC46    <---------bZIP60(1)  <---------HSFB2a(2)       <---------LBD16--------->LBD16    --------->RAP2.3(1) --------->RAP2.6(3)   --------->HSFB2a(2) -----------AtSPL8 --------->ZAT2      <---------DEAR3(1)--------->MYB52(1)  <---------TOE2(3)-------   ggaacataactcgggtttagcagccggaatcgtcgcattgaacggcgcagacgagtagttaacgacggcacgcgaaactaaggttctcgacaatggacgc  18959000                                                                         <---------GLK1(1)                                                         ===================HOX2a_HOX2a                                                         <------ZmHOX2a(2)       <------ZmHOX2a(2)                                                        --------->ARR14(2)       <---------ATHB12                                                        <---------ARR14(2) <-----------GT1                                                   --------->GLK1(2)    --------->ARR14(2)                                                  <---------ARR14(2) ------>ZmHOX2a(1)                                          <---------At4g35610        ===================HOX2a_HOX2a -->ANAC58                                --------->At4g35610---------->DOF2<---------At5g28300 -->ANAC58                       ---------->DOF2  --------->ARR14(2) --------->LBD16           ------ <LFY                           --------->AtMYB61 <---------GLK1(2) <---------LBD16            <----- -->ANAC46  --------->ZAT18  <-----------GT1 --------->MYB52(1)    ----------->RAV1(2)        -------   aaaatcgatctaattgcaccgaaacccattttcaccaaagcatcagcgaacagattccgatccaaaagctcctggatttaccgatcaagcttcgaaatta  18959100                       --------->HSFB2a(2)     <---------------------WRI1 --->YAB1              <---------HSFB2a(2)                                         <---------DAG2 ----ICU4       ---------->DOF2                         --------->LBD16 --------->ZAT6        <------ -->ICU4<---------ARR14(2)            *TSS   ---------->ID1       ----------->GT1  <----------DOF2<--   tcacttagccgattccaacaaagttcgagacttgaaacgaagaatttttcgctaaaccctgaatagtctagtaaacactaatgggccttatgggcctata  18959200                                                                                  --------->ATHB51                                                                                  -------->HAHB4                                                                                  -------->ATHB1                                                                                  --------->ATHB12                                                                                  <---------ICU4                                                                                 --------->ICU4                                                                               --------->YAB1                                                                          <---------YAB1                                                                        <---------RVE1(1)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                     ----------->GT1                                                                     --------->LBD16                                                                    <---------ANAC46                                                                   <---------LBD16<---------AHL20(2)                                                                <---------ANAC58 <---------YAB1                                                                <---------ANAC58 <---------ATHB51                       <---------ANAC58                     --------->ATHB51   <---------ICU4                       <---------ANAC58     <---------ICU4  <---------ICU4--------->ICU4                   <------------CBF        <---------YAB1   <------------ATHB5<---------AHL20(2)           --------->ATHB51              --------->YAB1     <--------ATHB1<---------AHL20(2)  <------ ---ZAT14 <---------YAB1          ---------->DOF2          <---------ATHB51   --------->AHL20(2) -------ZAT6<------------CBF ---------->DOF2--------->YAB1 <---------ATHB12  <---------YAB1  <-------   gtgtaagggcttataattgaacattgggtctcaaagaaaagactcataataactaaaatcaataattcgtgcggatattattaattattgtctccaaatc  18959300                           <----------TaMYB80                          <---------ARR11(3)                                    <---------AHL20(1)                      <---------ANAC55(1)                                       --------->AHL20(1)                      <---------ANAC55(2)                                       <---------AHL20(2)                      <---------ANAC46                                          --------->AHL20(2)                      <---------ANAC58                                <-----------GT1              --             <---------ANAC46                                         <---------AHL20(2)     xxxxxxxx  <---------AHL20(2)  <---------ANAC58  <------ZmHOX2a(2)         --------->AHL20(2)         xxxxxxxx --------->AHL20(2)   --------->ANAC55(2)        <-------TEIL     <---------AHL20(2)        xxxxxxxxx <---------AHL20(2) <-----------GT1    <---------ARR11(3)        --------->AHL20(2)        --------->ALFIN1 -----ARR10  <---------ANAC58          --------->ARR11(3)<---------At5g28300   --------->AHL20(2)  <- --CCA1(2)   <---------ANAC58      ---------->DOF2      <-----------GT1 <---------AtLEC2   xxxxxxxxxx   tcattaaatgttttggcgagaattacgtgatattccctaaagatcaacatatacatttttacagccatttatttacatgaaataaattttggagttggga  18959400                                                          <<<<<<<<<GT-1                                                          <-----------GT1                                                      <---------CCA1(1)                             -                                 ----------->GT1      <---------RVE1(1)                            --             <-----------HVH21  <---------AHL20(2)   --------->ARR11(3)                      --------          <---------ANAC58  <---------AHL20(2)       <---------ARR11(3)<---------ANAC58      <-------          <---------ANAC58  --------->ATHB51         --------->AHL20(1)<---------ANAC58      --------   <-----------GT1          --------->AHL20(2)   ---------->DOF2     --------->ARR11(3) <---------HSFB2a(2) ------->AHL20(2)          --------->ICU4     --------->AHL20(2)     <---------ARR11(3) --------->HSFB2a(2) xxxxxxxx>smallRNA(i)    --------->YAB1       <---------AHL20(2)    <---------CCA1(2)  <xxxxxxxxxxxxx xxxxxxxx>smallRNA(s)   --------->AHL20(2)--------->AHL20(1)   ------>MYB46(1)         xxxxxxxxxxxxxx xxxxxxx>smallRNA(s)    <---------AHL20(2)--------->AHL20(2)   ------>MYB83----------------->AG    <- --------AHL20(2) ----------->HVH21      --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<- xxxxxxxxxxxxx>smallRNA(se3)<---------ICU4<---------AHL20(2) <---------MYB59<---------MYB59 ---------   tttatttacaatgcttgtcactgacattaattatttagttaaaaaaaattaaaaagatattaaccaaactatatcttgcctaatttgtttctaaaaatct  18959500      <---------ICU4    --------->GLK1(2)   <xxxxxxxxxxxxxxxxxxsmallRNA(si3) -------->ANAC46 ------->ZAT14 ->GLK1(2) --ARR11(3) ->ARR11(3)        <----------DOF2 xxxxxxxxxxsmallRNA(fl3) xxxxxxx>smallRNA(s2)          --------->AHL20(2)    --------->AHL20(2)                <---------AHL20(2) --------REM1(2)--------->ARR11(3)                XXXXXXXXXXXXXXXXXXXX>MIR861-5P       --------->AHL20(2) --------ZAT14  <---------ARR11(3)           <-----------GT1                       --------->AHL20(2) >RVE1(1)      <---------CCA1(2)    ----------->GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ctacacaatcttttcatatatctttttaaaaaaaaaaatcgtgaattttacttcaaaaaatatgcataaatccgatttatagcaaatatttatatcaaca  18959600  Previous    Next  AGI:  At3g51010.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN73508.1) Range:  from: 18957679    to: 18959138    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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