Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------YAB1                                  <---------AHL20(2)                                  --------->AHL20(2)                            <---------ANAC46                            ----------->GT1                          ----------->GT1                                                           -                          <---------ANAC46                                                   ------>ZmHOX2a(2)                         <---------AtMYB61        <----------DOF2                          <---------AGP1                       <---------ANAC58     <-----------RAV1(1)                            --------->ARR14(2)                       <-----------RAV1(1)  <---------bZIP60(2)                            --------->ARR11(3)               --------->ANAC55(2)--------->YAB1 <---------ANAC58                          <---------ARR11(3)     <---------At4g35610 --------->ALFIN1   <---------REM1(1)                           <---------WOX13(1)    <---------TOE2(3)  <---------ANAC58  <---------YAB1  --------->ATHB12   <---------AHL20(1)<------    <---------TOE1(3)  <---------ANAC46--------->YAB1 <----------DOF2    --------->AHL20(2)<---------ARR14(2) --GT1      <---------AHL20(2) --------->YAB1    <---------ANAC58       <---------AHL20(2) ------->TEIL   ttgtttaagcttattttaagtatttgtgtggtgtaataatatgatgatgtggctttctttcattgagtcgctaaataatatatgtaagtgatggatcttt  18952500              <-----------------AGL2            --------->ARR11(3)            <---------ARR11(3)         <----------DOF2           --------->RVE1(1)        <-----------GT1       --------->AHL20(2)          <-----------GT1                         <---------ANAC58   <---------YAB1              --------->AHL20(2)                          <---------ANAC58  --------->AHL20(2)       <---------ANAC46                          <---------AHL20(2) <---------AHL20(2)        <---------ANAC58                          --------->AHL20(2)            -- -------->AHL20(2)         <---------ANAC58        --------->REM1(1)--------->YAB1    ----------->HVH21 ----DOF2  --------->CCA1(1) <---------MYB52(1)  <----------DOF2   <---------YAB1 <-------GAMYB   ---   gaattaatataaaatatctacttctggtttcgtttatttatctttctatcgcttcaactattccatgttattaaaatacttgtgagttgtgacacataca  18952600                         <------MYB46(1)                         ----------->GT1                         <------MYB83                        --------->MYB59                                                       <------                    <---------ICU4                                                            <------                    --------->ATHB12                                                        <--------     <---------YAB1 <---------AHL20(2)                                                 <---------ZAT14 --------->ANAC58   --------->AHL20(2)                                            --------->MYB46(3) <---------ANAC55(2)--------->ATHB51                                              <---------MYB52(2) --------->ANAC58  --------->ICU4                                                --------->DEAR3(2) ----->GAMYB       <---------YAB1                                           --------->LBD16<---------MYB52(1) ------>MYB46(3)--------->AHL20(2)    <----------DOF2    <----------DOF2  <---------LBD16 <-------GAMYB   accacgtataattcacatgtaattatttggtaattcaattctttacaagtttatatgttcttttgcatacaagttatcagggaaacgaccgcagttgttt  18952700                                                                   ----------->GT1                                                              <---------GLK1(1)                                                              --------->GLK1(1)                     -                                                             <---------ARR14(2)                     <     ------->TEIL                                            --------->ARR14(2)               -------   <<<<<<<<<EIN3                                          <---------ANAC46                 --------->MYB52(1) ---ANAC58          <-----------------AGL1                <---------TOE2(3)      --------->ALFIN1  -- ---ANAC58    <---------TOE2(2)     --------->ANAC46     <---------LBD16       --------->ALFIN1    <- -MYB46(3)   <-----------RAV1(2)   --------->SPL7       <-----------GT1 ---------->DOF2 --------->YAB1   ggcaatgtatattactcaggttttcaattcaggcccatacggcccaaataagttgtttttacggatatcgagttaaaagaggtgtgtcgattataacgga  18952800                                            --------->ALFIN1                                           <-------MYC4                                           ------->MYC4                                           ------->MYC3                                           ------->PIF5                                           <-------MYC3                                           <-------MYC2                                           ------->MYC2                                           <-------PIF5                                          <--------ABF1                                          --------->TGA1a                                          --------->O2                                          <---------TGA1a                                          ========================MYC_MYB                                          <---------ANAC55(2)                                          <---------ANAC46                                  --------->ARR14(2)                               --------->ANAC55(2)                               --------->ANAC55(1)                               --------->ANAC58                               <---------ANAC55(2)                       ------>MYB46(1)    <---------O2                         <-----------GT1                       ------>MYB83  --------->ANAC46                          --------->ZAT6               --------->ANAC46<---------ANAC58                              --------->YAB1             ------->GAMYB     <---------ANAC55(1)        ------->GAMYB--------->YAB1             --------->TOE2(3) --------->ANAC58           ------------>CBF  <---------YAB1      --------->ZAT6  --------->MYB52(1) ------>NtERF2   --------->ANAC58 <---------ICU4  <-----------HVH21 --------->MYB46(3)  <------------OsbHLH66          <---------ICU4             --- ------>MYC3 =======================================MYC_MYB           --------->ICU4          <------ -------MYC3--------->MYB46(3) --------->ANAC46          --------->ANAC46 --------->YAB1    --------- >GAMYB <---------MYB52(2)     <---------ANAC58<-----------HVH21    --------->YAB1          <-------- ------->O2-------->P--------->TOE2(2)  <---------ALFIN1 --------->ANAC58<---------YAB1    --------->ICU4 --------O2=========================================MYC_MYB        <---------YAB1          <---------YAB1   catgtgtcacactaaccacaaaaccaacgtcttacgtaatcgccacgtgtgtcacttcaacgcaatttgataataatcataatactatatgtgattatga  18952900                       <---------AHL20(2)                       --------->AHL20(2)                   --------->HSFB2a(2)                   <---------HSFB2a(2)                <---------ARR14(2)             <---------ANAC58             <---------ANAC58                                                                      -- --->ZmHOX2a(2) --------->ARR14(2)                <----------DOF2                             <------ ---YAB1     <---------ANAC46              <---------ARR14(2)                              ---------- >YAB1---------->DOF2 --------->YAB1    <---------ANAC46--------->WOX13(1)                --------->DAG2 -ICU4*TSS  <---------LBD16<-----------GT1 --------->ARR14(2)                           ---------->DOF2   tccctatccaaagttgcggttctataaaaataccattcaagagcgtatacatctttatccatcagtgtcttaattttgtctatagctaaaaaaaggttca  18953000                                                                                                  ---                                                                                               ------                                                                                             <-------                                                        --------->MYB46(3)                   --------                                                       ------>MYB83                         ---------                                                      --------->MYB52(1)                   --------->AtMYB61                                                      ----------->RAV1(1)                 <---------MYB55(2)                                           <---------At4g35610                            <---------ABI4(2)                                           --------->At4g35610  <---------------AGL15     --------->MYB46(3)                                           --------->ZAT2       ----------------->AGL1  --------->RAP2.6(2)                                           <---------ZAT2      <-----------------AGL1  <---------MYB55(2)                                        --------->ZAT18------>MYB46(1)                 --------->MYB46(3)                                   --------->LBD16   --------->AtMYB61               --------->ANAC58                                 <---------LBD16     --------->MYB46(3)   --------->GLK1(1)--------->DEAR3(1)   ---------->DOF2    ----------------->AG----------->RAV1(1)  <-----------------AG  --------->ANAC46 ------->YAB1         ==========================================================MADS_MADS------>NtERF2 -TEIL                ----------------->AGL1        --------->MYB46(3)    <---------GLK1(1)<---------ALFIN1 ->GT1                ----------------->AGL2 <---------ZAT18  <---------WRKY18(1)    --------->ANAC58   attgtaaaaggaatatggagtcttaccaaaaccagtccggagcgcagcagactcaccaacagcttgaccaatttggaaatccatttccagccaccaccgg  18953100                           <---------TGA1a                       <-----------RAV1(2)                       <---------ALFIN1                   --------->GLK1(1)                   --------->At4g35610                   <---------At4g35610                   <---------GLK1(1)               --------->ALFIN1             --------->LBD16              <---------AtMYB61            <---------DREB2C(2)         <---------MYB46(3)        <------------AtMYB77 --------->ALFIN1        =============================MYC_MYB          <---------ANAC58       <---------At4g35610 <---------ANAC58           <---------ANAC46      <---------ARR14(2)   =============================bZIP_DOF      --------->ARR14(2)   <---------O2--------->ALFIN1              <---------HSFB2a(2) --->NtERF2 --------->ATERF1(2)        <---------DEAR3(1)            --------->HSFB2a(2)         ---- --->LBD16  <---------ATERF1(2)        <---------AtMYB61          <---------MYB52(1)     <---------STY1(2) --LBD16--------->MYB46(3) <---------ANAC58  <----------DOF2  <---------At5g28300        <---------ZAT2 --->RAV1(2)<---------DEAR3(1)   ----------->HVH21    <---------ANAC58                   --------->ZAT2 >MYB52(1)--------->MYB52(1)--------->LBD16<---------MYB46(3) <-----------------AGL1--------->ZAT6   agcctatggaactgccggtggagctccagccgtggctgaaggtggtggtttaagtggcatgcttcaccgttctgggagtagctctagctctagctcggta  18953200                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                         --------->MYB52(1)                                                                                       <---------MYB111(1)                   <----------DOF2                                                     <---------MYB59                  <---------ANAC58 --------->ZAT18                                     <---------MYB46(2)                  <---------ANAC58 --------->ZAT14                                     <---------MYB111(2)          --------->ANAC58         <---------ZAT14                                    <---------At4g35610          --------->ANAC58         <---------ZAT18                                    --------->ANAC55(2)          <---------ANAC55(2)    <---------------AtSPL8                        <-----------GT1          --------->ANAC46 --------->ICU4<----------DOF2                 <---------AHL20(2)          --------->ANAC55(2)    --------------->AtSPL8------>MYB46(1)   --------->AHL20(2)        <-----------GT1  <---------------AGL15         ------>MYB83     --------->AHL20(2)   -------- ------------------->TaNAC69(2) <---------ANAC46  <-----------GT1   <-------TEIL      --------->ANAC46   tgcttctgttttacgcaattgcttttgcaatatttagtgtactctttctatatcaccaaatacaagaagtttcatttaatttgacttcacctaactagaa  18953300                                                                                                   <-                                                                                            <--------                                                                                            ---------                                                                                            <--------     <------ZmHOX2a(1)    --------->ZAT6                         --------->YAB1            --------->AHL20(2) --->GT1                <-----------GT1     <-----------GT1     <---------ATHB12           --------->YAB1   aaaatcaggaaaccatattttagatttaactctacatattttttataaaccattttttgtgttcaaatgataagtttttgtttgtaatttgaattatatt  18953400  Previous    Next  AGI:  At3g50970.1    Description:  LTI30 (LOW TEMPERATURE-INDUCED 30). Identical to Dehydrin Xero 2 (XERO2) [Arabidopsis Thaliana] (GB:P42758;GB:Q41966); similar to COR47 (cold regulated 47) [Arabidopsis thaliana] (TAIR:AT1G20440.1); similar to dehydrin-like protein [Prunus persica] (GB:CAC00637.1); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 18951758    to: 18952535    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g50980.1    Description:  XERO1 (DEHYDRIN XERO 1). Identical to Dehydrin Xero 1 (XERO1) [Arabidopsis Thaliana] (GB:P25863;GB:Q0WP39;GB:Q9SD47); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 18952906    to: 18953846    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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