Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                    --------->ATHB12                             --------->AHL20(2)                                   <---------YAB1                                <---------AHL20(2)                           --------->At4g35610                                 <---------AHL20(2)                           --------->ZAT2                                      --------->AHL20(2)                           <---------At4g35610                               --------->AHL20(2)                           <---------ZAT2                                    <---------AHL20(2)                       --------->ANAC46                                    --------->AHL20(2)          --------->ARR14(2)   --------->ARR14(2)                          <---------AHL20(2)          <---------ARR14(2)   <---------ARR14(2)                        --------->AHL20(2)         ------>ZmHOX2a(1)----------->RAV1(1)                           --------->AHL20(1) --------->YAB1        --------->ANAC58                                 <---------AHL20(1) --------TOE2(3)       --------->ANAC58                                --------->AHL20(2)<---------AHL20(2)   caaggattatcctatctgcatacttacgcagcagatagttattggtaagagaaatgtcgagcttgaaaacaaaatatatatatatatatatatatatgta  18940100                  --------->AHL20(2)                  <---------AHL20(2)                <---------------AGL15                --------------->AGL15               ----------------->AGL3               ------>ZmHOX2a(2)                                         <---------ARR14(2)               <-----------------AGL3                                    --------->ARR11(3)              <------ZmHOX2a(2)                                          <---------ARR11(3)             --------->ARR11(3)                              --------->ANAC46                    ----             --------->ARR14(2)       --------->TOE2(3)      --------->ANAC58                   -----             <---------ARR11(3) <---------ANAC55(2)          --------->ANAC58            --------->CCA1(2)             <---------ARR14(2) ----------->GT1             --------->LBD16             <---------ARR11(3)            <------ZmHOX2a(1)   --------->ANAC55(2)         <---------LBD16             --------->ARR11(3)      --------->ARR11(3)    --------->ARR11(3)         <----------DOF2   --------->ARR14(2)    ------   tgaaatagtatctaggatcttaaattagaaaatcatgtaacatcagtgagtgttgttctttccacggaagaagcagatattgatgcatgagatatatcct  18940200                                                                        <---------GLK1(2)          --------->DAG2                   <------MYB83       --------->TGA1a        ---------->DOF2                    ----------->GT1    <---------O2 <---------ARR11(3)     <---------DAG2     <---------ANAC55(2)<---------TGA1a --------->ARR11(3)     <----------DOF2    <------MYB46(1)    --------->O2 ------>DOF2            ================================================bZIP_DOF     --------->ANAC58 ->ZmHOX2a(1)       <---------ZAT18       --------->MYB59--------->ANAC46            --------->ANAC58 --->TOE2(3)      --------->ANAC46       <---------MYB55(1)<---------ZAT18       ------>ZmHOX2a(2)   aaagatgtccaaaaggttttaggccacttttcatccattctcagtaggtaactctgtttaggccacttgactcagattagtgatcccaaggtactagttt  18940300                             ---------->DOF2                        <----------DOF2               --------->MYB46(3)                                    --------->ZAT6             <----              --------->ANAC58                       ---------->DOF2------>MYB46(1)             <----              --------->ANAC58                       --------->YAB1 -------->P        --------->ZAT6            --------->MYB46(3)                      <---------ATHB12------>MYB83    --------->YAB1   ctgaatttgtttgaacaaccaattgtctttagaaagacataaactcttgttccaataaagagcctataccaactctagctattcaatgacactattttag  18940400                                                                                       --------->At4g35610                                                                                       --------->ZAT2                                                                                       <---------At4g35610                                                                                     --------->MYB46(3)                                                                                   --------->MYB52(1)                                                                                --------->ANAC58                          --------->YAB1                                        --------->ANAC58                         <---------ATHB12                                       --------->ANAC46                     ------------>CBF                                       --------->ANAC58                <------------CBF                                            --------->ANAC58               --------->ATHB12                                         --------->ANAC58               <---------ICU4                         ------->TEIL      --------->ANAC58        <----               --------->ATHB51                    <---------YAB1       --------->ANAC46       ------               -------->ATHB1               ----------->GT1        --------->YAB1  ----------->RAV1(1) -----TOE1(3) <---------YAB1             --------->CCA1(2)  ------>ZmHOX2a(1)  --------->ZAT18 <----- -----TOE2(3)<----------DOF2    ---------->DOF2<---------GLK1(1)<---------CCA1(2) --------->ANAC46   ggtttagcatttttgcattattgtccaatgatacaaaagagagagatggatatatgaatgtcctctctatcttgacgcaagcacacaacagctgaaatat  18940500                     --------->GLK1(2)         <------ZmHOX2a(1)       --------->ANAC58       --------->ANAC58           --------->ATHB12       *TSS          --------->ARR14(2)                        ------->TEIL -----YAB1           <---------ARR14(2)                     ----------->GT1 --->ARR11(3)       <---------GLK1(2)                       <---------ANAC46 ----ARR11(3)     <---------TOE2(3)                    --------->YAB1<-------TEIL <-----------GT1----   catatagacaaggacgttttaagaatctggtggaattgatttgatagtagtatacaattgtgatgtatatatacatacaaatattaactgttcttggatt  18940600                                           <---------MYB52(1)                                         --------->ANAC58                                         --------->ANAC46                                       <---------ALFIN1                                ----------->HVH21                               <-----------HVH21                              <---------ANAC58                         --------->ANAC46--------->ANAC58                --------->AHL20(2)--------->PCF2  ---------->DOF2--------->AHL20(2)  <---------ALFIN1     <----------DOF2 ----->ATHB12 <----------DOF2 <---------ANAC58        <----------DOF2  <----------DOF2   <-----------GT1   tattgaaaggaaatgactttaaattacaagaagcgtgacccacacgttaagtcagtctttctttactaatattcttttcgattagtcaaataaacctcat  18940700              <---------ZAT18              --------->ZAT18             --------->ATERF1(1)            --------->PCF2                                                             <---------REM1(1)     --------->ATHB12        <----------DOF2     <----------DOF2<---------AHL20(1)   <-------MYC3   -  --------->ANAC46           <---------DAG2  <----------DOF2    <---------ARR11(3)   ------->MYC3   -  --------->ANAC58         <------------------------ANAC81      --------->AHL20(2)  --------->ANAC46<  --------->ANAC58     --------->ZAT6   <<<<<<<<<TBF1           --------->AHL20(1)<---------ALFIN1  <   gaacaagtcattggagcccacttaaactctacttttctattcttcttctttctttttgttattctatatattagttagcaacttccacgttgtagcgatg  18940800                                               --------->MYB46(3)                                               <---------MYB55(2)                <---------ANAC58              ------>MYB46(1)                <---------ANAC58              ------>MYB83       --------->ANAC58                     --------->DEAR3(1)       --------->ANAC46                     <---------MYB111(2)     <---------YAB1       --------->ANAC58                     <---------MYB111(1)   --------->YAB1    ------>ZmHOX2a(2)                       --------->AtMYB61     <---------ICU4   <------ZmHOX2a(2)                       --------->ZAT2        --------->ICU4  <---------ARR14(2)                       <---------ZAT2     --------->AHL20(2)  --------->ARR14(2)                     <---------ALFIN1    <---------AHL20(2) <------ZmHOX2a(1)                 --------->LBD16           --------->AHL20(2) -------->HSFB2a(1)              <---------LBD16       --------->AHL20(2)          <-----------GT1 -------->HSFC1(2)  <---------ANAC58  --------->PCF2  <---------ATHB12  --------->ARR11(3) ---------HSFC1(2)  <---------ANAC58 --------->ARR14(2)--------->YAB1   <---------ARR11(3) ---------HSFB2a(1) <---------ANAC46 <---------ARR14(2)<---------AHL20(2)--------->GLK1(2)   gaaggatccaagctacttccttgcgtccataagtctccggttcccacctcccaccaattatatataaattatgagattttgggtttaacaaaactcaaaa  18940900                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                         <------NtERF2                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                       <---------DEAR3(1)                                                                                      <---------LBD16                                                                                      --------->LBD16                                            <---------At4g35610                      --------->DEAR3(1)                               ----------->HVH21               --------->ANAC58    --------->ABI4(1)                        <---------At4g35610 --------->At4g35610--------->ANAC58   --------->AtMYB61<-                        --------->At4g35610 ------>NtERF2 --------->ANAC58        --------->DEAR3(1)                       ----------->ARR10    --------->LBD16   <---------LBD16     <---------ALFIN1---           --------->ANAC46  ------>ZmHOX2a(1)--------->DEAR3(1)                 --------->MYB46(3)<-         --------->ANAC58    <---------At4g35610          --------->ANAC58 <-----------ARR10    <----         --------->ANAC58    ----------->RAV1(2) <---------ARR14(2)      <---------HSFC1(2)    <-----         --------->ANAC46    --------->At4g35610 --------->ARR14(2)      --------->HSFC1(2)  <-------   aacacaaatacacccaaaacaagatgagctcctctgactcttcttccgccgaatcccgtctagccacggctaagacggttctcaccaccgcggcttcggt  18941000  Previous    Next  AGI:  At3g50930.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G50940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63838.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 18940507    to: 18942820    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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