Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <-----------GT1         --------->AHL20(2)         <---------AHL20(2)         --------->YAB1     --------->AHL20(2)     <---------AHL20(2)                                                                          ----   --------->TOE2(3)                                                                <---------GLK1(1)  <--------HAHB4                                                         <---------AtLEC2       <----  <---------ICU4                                                        <-------TEIL--------->GLK1(1)  --------->ATHB12                                                   <---------ANAC46           ----- --------->ICU4                                                      <---------ANAC55(1)      <------ <---------YAB1       ---------->DOF2                                <---------ANAC58         <------ ------->YAB1    <-----------HVH21   --------->YAB1                  <---------ANAC58      --------->AHL20(2)   gtcatcattaattaaaaccggtcagaaagaaacacacattgatactgaagaaacatttcatcgaacacattgcgtgcatgaatgagatttccattaacta  18934200                                  --------->WRKY12                                  --------->WRKY38(1)                                  ----------->HVH21                                <---------ATERF1(1)                                <---------DEAR3(2)                                <---------At4g35610                                --------->At4g35610                                --------->LBD16     --------->GLK1(1)                               <---------DEAR3(1)   <---------GLK1(1)                               --------->ATERF1(2) --------->ARR14(2)                               --------->DEAR3(1)  <---------ARR14(2)                             --------->ABI4(1)     <---------ARR11(1)                             ------>NtERF2         <-----------ARR10                            --------->DREB2C(2)    ------->TEIL                            --------->DEAR3(1)    <---------CCA1(2)            <---------ANAC58                            <---------ALFIN1      <---------ARR14(1)           <---------ANAC58                            ------->GAMYB        --------->LBD16             --------->GLK1(2) ---->P  <---------TOE2(3) --------->DEAR4(2)   --------->ANAC55(2)         --------->ARR11(3) -------GT1                --------->MYB46(3)   <---------ANAC55(2)         <---------GLK1(2) ---->MYB52(1)             --------->DEAR3(2)   <---------ANAC58            <---------ARR11(3) ---MYB52(2)               <---------MYB55(2)   <---------ANAC58      <---------YAB1      ------->GAMYB ---MYB46(2)             <---------ALFIN1   <----------DOF2     <---------MYB46(3)    <---------ALFIN1   accagacgattaacaatggcttcaatcccaccgccggtgaccaagtctttccgtatctccgatgagttgttgatgaaagattcttgctccaacgctccaa  18934300                                                                                            <--------                                                                                            <--------            --------->ATHB12                         <-----------HVH21                      ---------           <---------MYB52(1)                       ------->GAMYB                           =========          <---------RAP2.6(3)                       =================================================          <-----------HVH21                      --------->MYB52(1)                         ---------          <-----------TGA1                       <-----------GT1                            ---------       <---------At5g28300                --------->ARR11(3)                                =========       <---------DOF5.7(2)                <---------ARR11(3)                             --------->TOE1(2)     <---------MYB52(1)                   --------->GLK1(2)                            --------->PCF2     --------->DOF5.7(2)                  <---------ARR14(2)    ---------->DOF2       --------->GLK1(1)    <-------GAMYB  ----------->RAV1(2)    --------->ARR14(2)    =====================================   <---------MYB46(3)                    <---------GLK1(2)   <------ZmHOX2a(2)  ---------->DOF2   ---   --------->MYB52(2)------>ZmHOX2a(1)   <---------ARR14(1) --------->AGP1      =====================   attgttcgttaccgtcattgctcctgcttccgactctgctagagaatcttttaacggtcatagatccaaagctagagacaaacaaaggagacccacgaga  18934400                                           <------ZmHOX2a(1)                                       <---------TOE2(1)                                       <---------TOE1(1)                                      <-------TEIL -TGA1a                              --------->CCA1(2)                       <---------ZAT14 -O2                              <---------TOE1(3)                          --------->ZAT14 >O2                              <---------------AtSPL8               <---------PCF2 ===========================bZIP_DOF--------->TOE1(2)                 ----------->HVH21 =MYC_MYB                    <----------DOF2                        --------->ALFIN1 >TGA1a                     ======================HOX2a_HOX2a      <-------PIF5 >ANAC46                    ------>ZmHOX2a(2)                      ------->PIF5 ===========================bZIP_DOF<---------SPL7                --------->ZAT2 =bZIP_DOF                <---------ARR11(3)                      <---------ZAT2 >>>>>>>>>TBF1 ------>ARR11(3)          --------->ARR11(3)                    <-----------RAV1(2) >>>>>>>>>TBF1 =bZIP_DOF       ---------->DOF2  <---------TOE2(3)---------->DOF2<---------At4g35610  >>>>>>>>>TBF1   gataatcgaactatagctcgaaagtctcgatcttttaaggtacgaggaagagtcaaagtagaaattgcaggtgggacagtgaagaagaagaagaagagaa  18934500                ---------->DOF2 <---------WRKY12              --------->HSFB2a(2)              <---------HSFB2a(2)<---------DOF5.7(2)      ------>NtERF2             <---------WRKY45   <---------At4g35610          <---------WRKY38(1)                                       <---------ARR14(2)   --------->At4g35610     ---------->DOF2                            <-------TEIL    ----------->GT1   <---------ATERF1(1)   --------->CCA1(2)                    ----------->GT1*TSS    ----------->GT1  <---------DEAR3(1)  ----------->GT1                   ---------->DOF2   --------->SPL7  --------->ARR14(2)   gacgacgctgccatttccaaaaggaagataaaagtcaacgtagtatcaaatccatcgctaaaggaagtaaaattcgtaagacgaagaagggaaatatgca  18934600                                 --------->TOE1(2)                                 --------->TOE2(2)                                ----------->RAV1(2)                               --------->GLK1(2)                               ------->TEIL                        ---------->DOF2                              --------->ARR14(2)          ------------>CBF                   <--------P <---------ARR14(2)          <---------ATHB12                          <        <---------ATHB12    --------->ANAC58      <<<<<<<<<TBF1--------->YAB1                --------        ------------>CBF    --------->ANAC58 <----------DOF2--------->WOX13(1)            -----------   aatcgaagaaatcaatgtctggttgagaacaagaacctgagagagagctttcttcttcaaatcaatcttcaaagtttttttgctcgaaaacgagtttgtt  18934700                                                         <---------ANAC58                                                     ------->PIF5                                                     <-------MYC3                                                     <-------MYC2                                                     <-------MYC4                                                     ------->MYC2                                                     <-------PIF5                                                     ------->MYC3                                                     ------->MYC4                                                    --------->ANAC46                                                    <---------O2                                                    --------->O2                                                    --------->PIF3(3)                         --------->YAB1             <---------TGA1a               --------->ANAC58                     >>>>>>>>>>HY5            ----------->HVH21 <---------ANAC58      --------->TGA1a          --------->TOE2(3)   <---------ANAC58      <---------PIF3(3)   ----------->GT1  ---------->ID1        <---------YAB1     <---------GLK1(2)           ----------->GT1 -----------RAV1(1)  <---------AHL20(2) --------->YAB1   <---------ANAC58 --->GT1  --------->TOE1(3) --------->ARR11(3)    <---------ALFIN1  --------->MYB52(1)         <----- ->MYB.PH3(2)  --------->ANAC58        <---------ATHB12  <---------ANAC46                     -------   atttgttgtttaccttgacgcattttataatatcgtgaccactcatattcttccacgtggcatgtagaataaacgggtaaaccaatattgaagcaaatta  18934800                                                                                 <---------ANAC58                            --------->AHL20(1)                                   <---------ANAC58                            --------->AHL20(2)                              <---------ANAC58                            <---------ARR11(3)                              <---------ANAC58                           <---------CCA1(2)                           --------->At4g35610                <---------At4g35610                                   --------->ARR11(3)                <---------ZAT2                --------->TOE2(3)     ----------->HVH21                --------->At4g35610    <-----------GT1            <---------At4g35610                --------->ZAT2  --------->AHL20(2)                <---------ANAC55(2)                ----------->RAV1(2) <---------AHL20(2)            --------->ANAC55(2)              <-----------RAV1(2)   --------->AHL20(2)            --------->At4g35610      --------->CCA1(2)   <----------DOF2    ------>NtERF2 --------->YAB1              <-----------RAV1(2)       <---------ARR11(3) ----AHL20(2)------>ZmHOX2a(1)  <---------AHL20(2)      <---------REM1(1)   <---------ANAC46 -->AHL20(2)--------->TOE2(3)  <---------AHL20(2)      <---------TOE2(3)------>ZmHOX2a(2) --------->ARR11(3)   atgggcttttgtttcctcagctgaggcccatatattaattaaaaccattcttagtttgatgtagcatcaggtgatctggagtggcttcatgagatatatg  18934900                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                     <----------ID1                                                           <---------ZAT18          ----------->GT1                                                           --------->ZAT18         <---------------AtSPL8                                               <---------YAB1                      --------------->AtSPL3                                               ------>ZmHOX2a(1)                   --------->DAG2                                              --------->TOE2(3)                   ---------->DOF2                                           <---------ARR14(2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 <----------DOF2<---------ICU4     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     <----------DOF2       --------->ARR14(2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   tctatgggcttagttttgtagctcttttcatttagcttttgtacaaatcctcattagtttgtgcccaaaaaaaaaaaaaaaaaaaaaagtacaaatcctc  18935000                              <---------RVE1(1)                             --------->ARR11(3)                             <---------ARR11(3)                                         <---------ICU4      ---------->DOF2        <---------ARR14(2)                                        --------->AHL20(2) -----ICU4             ------>NtERF2                                         ----------->GT1 -------- ----YAB1            <---------ANAC46                                       --------->DAG2   -------- >ZmHOX2a(1)  <-------MYC3   --------->ARR14(2)         ----------->GT1   ---------->DOF2  <--------- -->TOE2(3)   ------->MYC3  <------ZmHOX2a(1)  <---------YAB1          --------->AtLEC2--------->ICU4   attagtttaaaaggcatatggttgccgagaggattttttgttttgttttatgcttctcttgtaaaatgttgacatgaaaaggtgaagaaatatttacctg  18935100  Previous    Next  AGI:  At3g50920.1    Description:  phosphatidic acid phosphatase-related / PAP2-related. similar to phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] (TAIR:AT5G66450.2); similar to phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] (TAIR:AT5G66450.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45850.1); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 18933368    to: 18934577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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