Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                     <---------------AtSPL8                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                                 --------->YAB1                           <----------DOF2                                       <---------ICU4  ----                           <---------DAG2                                     --------->YAB1  <------                      --------->YAB1                                     <---------YAB1      <-------TEIL ->TOE1(3)           <-------TEIL                                     --------->GLK1(2)     --------- ->TOE2(3)       <---------YAB1                  ---------->DOF2      <---------ARR11(3) <-------TEIL -GT1         --------->GLK1(2)    <-----------GT1          <---------YAB1   <-------TEIL------->TEIL   aaatggctgttttaaaattctgattcatacttttttttttctgtctgaatagaaagttgattttgtttgaaaaatctgattcataatcatgtacatgcat  18928600                                                             <---------At4g35610                                                             --------->At4g35610                                                            <---------YAB1                                                      ------>ZmHOX2a(2)                                            --------->HSFC1(1)                                    ---                                            --------->HSFB2a(2)                                 <----                                 --------->ARR14(2)  <------ZmHOX2a(2)                        <------                             <---------At4g35610    --------->ARR11(3)                        -------                             --------->At4g35610    <---------AGP1                           --------                           =================================HOX2a_HOX2a                      <-------   ------->GAMYB           <------ZmHOX2a(1)<---------HSFB2a(2)                     <---------ARR11(3) -->YAB1             --------->YAB1         <---------HSFC1(1)                      --------->ARR11(3) ----->YAB1      --------->MYB46(3) <-----------GT1 --------->AGP1 <----------DOF2  <---------GLK1(2) ---AtLEC2     <-----------GT1   <---------ARR14(2) <---------ARR11(3)            <---------TOE2(3) >AtLEC2  ----------->GT1  ==================================HOX2a_HOX2a  ----------------->AGL2<----   gataacagtctgatgttaaaccatcgtaaggagcagatttagcattctagaatagatctattctgcttacttttaccccaaatttagatttttccatgat  18928700 <---------AHL20(2) <---------ARR11(3) --------->AHL20(1) --------->AHL20(2) <---------AHL20(1) --------->ARR11(3)                                                                 --------->ANAC58 ------>AHL20(2)                                                                    --------->ANAC55(1) -----WOX13(1)          ---------->DOF2                                             --------->ANAC55(2) ---ICU4          <------ZmHOX2a(2)                                                 --------->ANAC46 -->ATHB12  --------->CCA1(2)                    >>>>>>>>>>>>>>>>>LFY               --------->ANAC58 ->ICU4    --------->ARR11(1)                   --------->ANAC58              <---------REM1(1) --YAB1    --------->ARR11(3)                   --------->ANAC58             --------->ARR11(3)------ -----YAB1 <---------ARR14(2)                 ---------->DOF2            ---------->DOF2       <-----   taatatattgttagatatggatcagacaaagaagattagtctaaactctaaagccattgtccatttgatttgtctaaaagatgtagacgtaatagtcagc  18928800                                                                                    <---------ICU4                                                                                   --------->AHL20(2)           <---------WRKY18(1)                                                <----------DOF2          ----------->HVH21                                               <-------MYC3          --------->WRKY38(1)                           --------->ALFIN1  <-------MYC2          --------->WRKY12  <----------ID1            <-----------RAV1(1) ------->MYC3   <---------ANAC55(2) --->At4g35610        <---------AHL20(2)         --------->ANAC46         ------->MYC2 --------->AHL20(2) ----At4g35610       --------->AHL20(2)   <---------ARR11(3)     --------->ZAT6    <---------AHL20(2)   ataaacacacatttgaccggcgatttaatagggacgaacaagaagatgtatacatcatgtgggtgtaacactaacacatgctttattaattacatataca  18928900                                            <---------AHL20(2)                                            --------->AHL20(2)                       ------>ZmHOX2a(2)   --------->AHL20(2)                      <------ZmHOX2a(2)    <---------AHL20(2)                     <---------ARR11(3)    --------->YAB1                     <---------ARR14(3) --------->YAB1              <-------GAMYB             <--------ATHB1             --------->MYB46(2)         --------->ATHB51             --------->MYB111(1)        <---------ICU4             --------->MYB111(2)   ------------>CBF             --------->MYB52(2)--------->ANAC58                          <-----------GT1             <---------MYB46(3)--------->ANAC58                 ------>ZmHOX2a(2)           <---------MYB52(1)  --------->ANAC46   ---------->DOF2       <-----------GT1          ------------>MYB.PH3(2) ----------->RAV1(1)          <------ZmHOX2a(2)   --------->AHL20(2)--------->ARR14(3) <--------HAHB4        <---------ARR11(3)   <---------AHL20(2)--------->ARR11(3)--------->AHL20(2)     --------->ARR11(3)          --------->ANAC58  <---------AHL20(2) <---------ARR14(2)--------->ICU4         --------->ARR14(2)          --------->ANAC58  --------->AHL20(1) --------->ARR14(2)<---------ATHB51       <---------ARR14(2)        ---------->DOF2  <---------AHL20(1)--------->GLK1(1)  <---------ATHB12       --------->AGP1      <---------CCA1(2) -  --------->AHL20(2)<---------GLK1(1)--------->YAB1           <---------AGP1<----------DOF2         *TSS   aaaatttaatttagttagttggagatctcatacacacaacaataattaaaataaaagtcaaacagatctactattttccttttcatatcacaaagcaaac  18929000                                                                                               ------                                                                                               ------                                                                                           <---------                                                                                        --------->AtMYB61                                                                                       --------->ANAC46                                                                                     --------->ANAC58                                                                                     <---------ALFIN1                                                                           <---------DAG2 --------->bZIP60(2)                                                                           <----------DOF2--------->ANAC46                                                                        <---------ALFIN1<---------ALFIN1                                                                    <---------GLK1(1)--------->ANAC58   ------>ZmHOX2a(1) --------->AtMYB61           --------->TOE2(3)  --------->GLK1(1)--------->ANAC46 --------->ID1    --------->ANAC46        <---------ARR11(3)  ---------->DOF2   <-----------GT1------   ttgtcctactacttaaatcaacaccatcacgaagaaagtttcaagaactcacctaaaacacaaacaaaggaactccactttttttccacaccacatcaca  18929100                                                    <---------DEAR3(1)                          --------->GLK1(2)        <------NtERF2                                 <---                         --------->GLK1(1)  --------->DAG2                                 --------->LBD16                     ----------->GT1       ---------->DOF2                                 ------>NtERF2                    --------->ANAC58    --------->ANAC58                                  <---------ANAC46 --->ANAC58         --------->ANAC58    --------->ANAC58                                  <---------RAP2.6(2) --->ANAC46    --------->At4g35610  <------NtERF2<---------DEAR3(1)                      <---------LBD16 --HVH21<---------------------WRI1 <---------MYB46(3)                                <---------ANAC58 --->ANAC58    --------->ZAT18    <---------RAP2.6(2)                 <---------ZAT14<---------ANAC58   ccatgtttagagccatgagcacaaggaaaatccatggtggctacgaaaagctcggcgatgaagaagcgagactgaagagggtctctagcgttccggctag  18929200                                                                  --------->ARR14(2)                                                           --------->MYB46(3)                                                          -------->P                                                          ------>MYB83                                                          ------>MYB46(1)                                                          --------->MYB52(1)                                                         --------->MYB52(1)                                                         --------->MYB55(1)                                                        --------->AtMYB61                                                       <---------MYB52(2)     <----------DOF2                                                       --------->MYB46(3)     ------>ZmHOX2a(1)                                                 --------->At4g35610         --------->TOE2(3)                     --------->LBD16        ----------->HVH21     <---------ARR14(2)               <-                   <---------LBD16          --------->DEAR3(1)  --------->ABI4(2)               <----                <---------GLK1(1)           --------->At1g77200 <---------MYB46(3)              <----             --------->ANAC58               --------->DEAR4(1) --------->ALFIN1                ------             --------->ANAC46               --------->DREB2C(2)<---------AtMYB61               <-----        --------->WOX13(1)<---------HSFB2a(2)----------->RAV1(1)--------->MYB55(2)           -------- ------ZAT6  --------->ANAC58              --------->DEAR3(2) <---------MYB52(1)           <---------   tgtttatggtcattcaagaaacccggttcaagaagtgaagaagacaccgacagcgaaaccaaccggtggttctgttcatcctttgtttagtttctttgac  18929300 ------TEIL                                                                                         < -----ANAC58                                                                                        - -----ANAC58                                                                                      <-- --------->AtSPL3     --------->ARR14(2)                                                      <------ZmHOX2a(1) ----TOE2(3)      >>>>>>>>>TBF1                        <---------ARR14(2)      <---------ANAC46   --- --->HVH21 ---------->DOF2       >>>>>>>>>TBF1    ------->GAMYB       <------MYB46(1)         ======= -DOF2 ---------->DOF2<---------ARR14(2)       --------->MYB52(1)     <------MYB83            =======   gttcattttcaaagaaagaagaagaatacggcgaagaagaagagtttagcaacggcgaaaccagagtttgctaggtatatggagtatgtgagagaaggag  18929400        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->ARR14(2)      <---------ARR14(2)        <---------ICU4     <---------PCF2   ----------->RAV1(1)           --------->ANAC58                             ---- ---------ANAC46      ------->TEIL                  --------->ANAC58                             <--- -------->ALFIN1    ------->GAMYB               <-----------HVH21                           --------- -------ANAC46     --------->ANAC58           <-------TEIL                  <---------CCA1(2)   ----- ------>ALFIN1     --------->ANAC58       ----------->ARR10          --------->ARR11(3)    ---------- =============HOX2a_HOX2a      <-------TEIL <---------GLK1(2)        <---------ARR11(3)  <-----------GT1 ==============HOX2a_HOX2a <---------ATHB12 --------->ARR11(1)   ---------->DOF2   <----------DOF2  <   gtgtgtgggatccgagttctaacgcaccagtgattcattacagatagattcgtcaaggaaaatgaataaaagatttgtatatcgtcttttttttccaaat  18929500  Previous    Next  AGI:  At3g50900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66490.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45855.1) Range:  from: 18929000    to: 18929599    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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