Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ICU4                                     --------->YAB1                                    <---------YAB1                                  <--------HAHB4                     <---------GLK1(2)                     <---------ARR14(2)                     --------->ARR11(3)                     <---------ARR11(3)     --------->At4g35610                     --------->ARR14(2)<---------YAB1         ----------->GT1          --------->YAB1      <---------WOX13(1)        <------ZmHOX2a(2)   ------>ZmHOX2a(1)       <------ZmHOX2a(1)                        --------        ===========================HOX2a_HOX2a    <---------TOE2(3)                         <-------- ----->GLK1(2)   ---------->DOF2 <---------YAB1 ---------->DOF2                          <---------AHL20(2)   atttgtggagatcgataaataaagatactcctactattattatgacagcataaaggattgacaaacattgttgttcgaagttttaatctattttatgata  18926700                                           <---------ANAC55(2)                                    --------->MYB52(1)                                            <--                                  <---------MYB52(2)       <-----------GT1                       ----                     ------>ZmHOX2a(1)--------->ZAT6      <-----------GT1  --------->DAG2 -------->P ->YAB1      --------->YAB1 --------->AHL20(2)          --------->YAB1    ---------->DOF2--------->MYB52(1) -YAB1      <---------YAB1  <---------AHL20(2)      --------->ICU4--------->TOE2(3)    <---------MYB52(2)   tgttagaacttaaaatcatagtcctaaaaatttataactaacaatacataagacataattttaacttacattagaaaaaagttttgaaaactaacccatt  18926800         --------->YAB1       --------->AHL20(2)                                                <------MYB46(1)      <---------AHL20(2)                               ------>ZmHOX2a(1) <------MYB83     <---------AHL20(2)                            <---------ALFIN1     --------->MYB59       <------MYB83     --------->AHL20(2)     ------>ZmHOX2a(1)    <---------ALFIN1------->TEIL             <---------ZAT2 ---------GT1          <----------DOF2          --------->ZAT14<---------ZAT14            --------->ZAT2 ----->AHL20(2)    <---------CCA1(2)<-----------GT1--------->ANAC46     --------->MYB111(1)   <------MYB46(1)   taactaatttaaaataatcccataactttcctctcatttatctctctctctccactcctcaagtctgtacttagtaggtaatagtttgactaagctaggt  18926900                                             ---------->DOF2                         --------->ZAT6    <---------YAB1                      <------------ATHB5                    ----------->GT1      --------->YAB1                        --------->YAB1                  --------->ICU4        <---------YAB1                         <--------ATHB1               <---------AHL20(2)     <---------ICU4                           --------->ATHB51               --------->AHL20(2)    --------->ICU4                            <---------ICU4             --------------->AGL15 <---------ICU4                             <---------ATHB51      <             --------->TOE2(3)     --------->YAB1--------->AHL20(2)           --------->ICU4       --             <---------------AGL15<---------ATHB12                ----------->GT1               -----           <-------TEIL<-----------GT1--------->YAB1        ---------->DOF2   <---------ATHB12-------   ttttttgcagacatacattaattagtaacaccatcaataatcatcataaaagaaaatagagagaaagagagataaatgcaataatgggagatggaccaaa  18927000                                                                    <---------ALFIN1      ----------->GT1                                               --------->ANAC58      <---------MYB46(3)                                       <-------TEIL     --------->ALFIN1                                     <---------ALFIN1    ------->PIF5                                        --------->AtMYB61    <-------PIF5                                        <---------ALFIN1   <---------At4g35610                               --------->AtMYB61   <---------ZAT2         ----------->HVH21          <---------ALFIN1 <-----------RAV1(2)   --------->TOE1(2)             --------->DEAR3(1)                 <------MYB46(1) -------TEIL           --------->TOE2(2)            --------->MYB46(3)<---------ALFIN1  <------MYB83 ------->ALFIN1       --------->YAB1                <------NtERF2   --------->ANAC58   <---------TOE2(2) ---->DAG2        --------->MYB46(3)<---------HSFB2a(2) ----------->RAV1(1)            <---------TOE1(2) --->DOF2    --------->YAB1         --------->HSFB2a(2)--------->ANAC46               <--------P   ggtgcaggtggtgaaagataacaaacatatgacaatgtctcgaaattaagaggcaccaccacacatacacacacactctctctctctagtaggtttgtgt  18927100                                                                                     ------>ZmHOX2a(1)                                                                                    --------->TOE2(3)                                                                                    --------->TOE1(3)                                                                               <---------YAB1                                                                             --------->YAB1                                                                            <---------YAB1                                                                            --------->ICU4                                                                         --------->TGA2(2)                                                                       --------->ANAC58                                                                       <---------ANAC55(2)                     <---------ARR14(2)                                --------->ANAC55(2)                     --------->ARR14(2)                                --------->ANAC58               <-----------RAV1(1)                                     --------->ANAC55(1)           <---------YAB1                                              --------->ANAC46          <---------AHL20(1)                     ----------->HVH21    <-------TEIL<---------YAB1          <---------ARR11(3)                   *TSS    <------ZmHOX2a(1)<-----------TGA1          --------->AHL20(1)                  <---------MYB46(3)      <-----------STF1    <----------     ------------>CBF<---------GLK1(2)     --------->ATHB12<---------MYB52(2)<---------ICU4       <--   ttttaaaatcaatatttttgttggattctcatgtgaaataaaacttgatgggtgataggaaacaaacacacatacgtcatcatcatccttaatttctatt  18927200               <---------YAB1                               --------->At4g35610              --------->TOE2(3)    --------->ZAT6         --------->YAB1             <---------ICU4   <---------At4g35610        ---------->DOF2  ------>ZmHOX2a(1)    --------->WOX13(1)   ------>ZmHOX2a(1)   <---------GLK1(2) -GT1 <<<<<<<<<TBF1 <---------ARR11(3)<---------ALFIN1 --------->YAB1            --------->DAG2 ---------GT1--------->YAB1   --------->At4g35610     --------->ZAT6     --------->YAB1     ---------   tctccttcttcttcatcatcaatatcaatctcatcttccactactcctcccctctaacaataagcagcatctctataatccctaaggtgagtccaaaagt  18927300            ---------->DOF2          <---------YAB1        --------->ATHB51        <---------AHL20(2)         -------->ATHB1        <--------HAHB4             --------->ATHB51        <---------ICU4             --------->ATHB12        -------->ATHB1            <---------YAB1        -------->HAHB4         >>>>>>>>>>ABI3        --------->YAB1         >>>>>>>>>>FUS3             <---------TOE2(3)                 <-------TEIL       <---------YAB1<---------GLK1(2)                   <---------AHL20(2)               --------->ARR14(2)       --------->ICU4<---------ARR11(3)                  --------->AHL20(2)               <---------GLK1(2)     <---------ICU4  --------->ARR11(3)    --------->ATHB12                              --------->At4g35610     --------->YAB1 <---------RVE1(1)    <---------WOX13(1)     <-----------GT1         ----------->ARR10    <---------AHL20(2)      <---------AtLEC2             --------->YAB1              <-----------HVH21    --------->AHL20(2)      <---------ANAC58           <---------YAB1       ---------->ID1<---------ARR14(2) ->DOF2<---------ATHB51     <---------ANAC58        --------->ICU4        <-----------RAV1(1)   cgtctattaattattaaaggagagatttttgcatgcattattgaatgatttataagtattaatatttaacaaagttttgttgttttgggtcagattcaca  18927400                                                                            --------->ARR14(2)                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(2)                                                                         --------->ANAC46                                                                         --------->HSFB2a(2)                                                                         <---------HSFB2a(2)                                                                        ------>ZmHOX2a(2)                                                                        <---------LBD16                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                   --------->ANAC58                                            ------>ZmHOX2a(2)      --------->ANAC55(1)                                          --------->ARR11(3)       --------->ANAC55(2)                                          <---------ARR11(3)       --------->ANAC58                                         --------->YAB1            --------->ANAC46                                      --------->YAB1         ----------->RAV1(1)   --------->ANAC58                                   ----------->RAV1(1)    --------->ANAC58  <---------ARR14(2)          <------ZmHOX2a(1)     --------->AtMYB61         --------->ANAC58--------->LBD16           <   <---------ANAC58             ------->GAMYB  ----------->RAV1(1) <---------ANAC55(2)              -   <---------ANAC58             --------->TOE2(3)     ----------------------->TaNAC69(2)            -  --------->ZAT2               --------->MYB46(3) ------->GAMYB   <---------LBD16  --------->ANAC58--  <---------ZAT2          --------->YAB1<---------ATHB12---------->DOF2<------ZmHOX2a(2)<---------ALFIN1   atggagcttggaggaaaatgcaatgcaattacaaccacaacaatgatctcaacagaagtaaagccacatacggatccggaaccagaagccaaacccgaat  18927500                                                          <---------ETT(2)                                                          --------->ETT(2)                                                          --------->WRKY38(1)                                                        --------->REM1(2)                                                        <-----------HVH21                                                       --------->ALFIN1                                                      <-------MYC3                                                      ------->MYC2                                                      <-------MYC4                                                      <-------MYC2                                                      ------->MYC4                                                      ------->MYC3                                  -                                                      -------->ABF1                               <--                           --------->ANAC58          <---------O2                                 ---             ==================================================bZIP_DOF                          <---             <----------DOF2                         --------->TGA1a                             ----            <---------ANAC58 ==================================bZIP_DOF                 --------->At4g35610            <---------ANAC58 ---------->DOF2         --------->ANAC55(2)            <-----------HVH21  <-------TEIL             --------->ANAC58          --------->O2             --------->LBD16    ---- <------ZmHOX2a(2)      <---------ATHB12             <---------TGA1a         <---------LBD16<-------- ---------ARR14(2)      <------ZmHOX2a(2)            <---------ANAC55(2)     <---------ANAC46  <----- -------->ARR14(2)   --------->LBD16>>>>>>>>>MYB2    <--------ABF1          <---------LBD16 --------- -------->AGP1      <---------HSFB2a(2)       =================bZIP_DOF    --------->MYB52(1) ------- ------->At4g35610 ----------------->AGL1     ---------->DOF2       --------->At4g35610 <---------At4g35610   cagatccatccatggctttattcccgatcaagaaagaaaaccaaaaaccaaagacacgtgtcgaccaaggagctaagtaccgggaatgtcagaagaacca  18927600  Previous    Next  AGI:  At3g50890.1    Description:  ATHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28); DNA binding / transcription factor. similar to ATHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G18350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67094.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 18927147    to: 18928309    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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