Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->MYB46(3)                                                                                    <---------ETT(2)                                                                                    ----------->HVH21                                                                                    --------->DEAR3(1)                                                                                   <------NtERF2                                                                                   --------->ATERF1(1)                                                                                   --------->RAP2.3(1)                                                                                  <---------RAP2.3(1)                                                                                  ------>NtERF2                                                                                  --------->LBD16                                                  <------MYB46(1)                 <---------ATERF1(1)                                                  <------MYB83                   <---------ATERF1(2)                                                  ----------->GT1                --------->DEAR3(1)                                                 <---------AtMYB61       <---------ARR14(2)                                               <---------ARR14(2)        --------->ARR14(2)      ----                                               --------->ARR14(2) <---------HSFB2a(1)------>NtERF2                                    ------>MYB46(1)      --------->YAB1  <-----------ARR10       ----                                    ------>MYB83 <---------MYB46(3)     <---------CCA1(2)        ----                            <---------ZAT6    <------ZmHOX2a(1)   --------->HSFB2a(1)<---------ATERF1(1)                          <---------ANAC58    --------->ATHB12  ---------->DOF2  <---------DEAR3(1)                          <---------ANAC58   <---------YAB1 <------ZmHOX2a(1)    --------->ATERF1(2)-                          <---------ANAC46  <---------TOE2(3)  <------ZmHOX2a(1)--------->ATERF1(1) -  --------->YAB1     --------->ICU4----------->RAV1(1)   <-----------RAV1(2)    <---------LBD16------   aaaatcaaaatcgaatttttgaaatgttgagtgttaccaacaaaatgaggattggtgaatcaggaggaaagtgcctatcttcgccggcgacccaatccaa  18892600                                                                                                   --                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                             <------NtERF2                                                                                            ---------                                                                                           ----------                                                                                           --------->ALFIN1                                                                                          ------->MYC2                                                                                          <-------MYC2                                                                                          <-------MYC3                                                                                          ------->MYC3                                                                                          ------->PIF5                                                                                         ============                                                                                         <---------PIF3(3)                                                                                         --------->PIF3(3)                                                                                         --------->O2                                                                                         ============                                                                                         --------->ANAC46                                                                                         <---------O2                                                                                         >>>>>>>>>>HY5                                                                          <---------ANAC58<-------MYC4                                                 ---------->DOF2          <---------ANAC46------->MYC4                                              <---------TOE2(3)           <---------ANAC58<-------PIF5                                             --------->MYB52(1)          <-------TEIL    <---------TGA1a                                       --------->ATERF1(1)     ---------->DOF2           --------->TGA1a   ------->GAMYB                       <------NtERF2           ====================================bZIP_DOF ----->ANAC46                        <---------DEAR3(1)      --------->ANAC58          <---------ALFIN1 ----->ANAC58                        <---------ANAC46        --------->ANAC58  <---------GLK1(2)----- ----->ANAC58  <----------DOF2      <---------LBD16--------->ANAC58---------->DOF2    <---------REM1(2) -------->MYB52(1)                --------->ANAC46 --------->ANAC58================================bZIP_DOF ---------->RAV1(1)              <---------LBD16 ==================================================bZIP_DOF ---->DOF2<---------MYB52(1)     <---------At5g28300       --------->MYB52(1)----------->ARR10<------   agcaacagagccgttgtctttagttcggagacattcacggcggagtctaacgaaaggaacagaacgaaagaaagatgcgtagattgtctccacgtggcgg  18892700 --------->ARR10 ---GAMYB               <<<<<<<<<SPL4 ----MYB46(3)           <<<<<<<<<SPL1                                                    <---------HSFB2a(2) ----->GT1              <<<<<<<<<SPL5                     --------->ANAC58               --------->HSFB2a(2) ---ANAC46             <---------SPL7                     --------->ANAC58   ------>NtERF2         -- ---RAP2.6(2)        <---------------AtSPL3     <---------DOF5.7(2)          --------->LBD16   ------ --->AtMYB77        <------------------SPL14  --------->DOF5.7(2)            <---------At4g35610   <- ->HVH21         --------->ANAC58            ============================HOX2a_HOX2a    <XXXXXXXXXXXX ====MYC_MYB  <---------ARR14(2)             ------>ZmHOX2a(1)    <------ZmHOX2a(2)    <XXXXXXXXXXXXX ===MYC_MYB   --------->ARR14(2)             <----------DOF2      ===============HOX2a_HOX2a   <----- ---->At5g28300  --------->ANAC58 <---------ANAC58     --------->At5g28300  --------->DEAR3(1) <----- ---DEAR3(1) <------ZmHOX2a(1)    <---------ANAC58    ----------->GT1     ------>ZmHOX2a(1)    ------   ttaaatccgattagaggaaacgcattgtacggtttagcgagtgagtcctttaacgacggtaagaaacgatcacttcctccgccgataacttcgagagagc  18892800                                   <------NtERF2                                   --------->RAP2.3(1)                                  <---------RAP2.3(1)                                  <---------ORA47(2)                                  <---------ERF1                                  ------>NtERF2                                  <---------ATERF1(1)                                  <---------DEAR4(2)                                 <---------RAP2.3(2)             --------->ANAC58                                 --------->DEAR3(1)              --------->ANAC58             <------                                 <---------RAP2.3(3)        <---------------AtSPL3            <------                                 --------->ATERF1(2)      <------NtERF2                    --------->ICU4                                 <---------ANAC46       <---------DEAR3(1)              <---------DEAR3(1)                                 <---------DEAR3(1)     <---------ANAC46               <------NtERF2                                 <---------ATERF1(2)   <------NtERF2                   --------->ATERF1(1)                                <------NtERF2          <---------------------WRI1     <---------ATERF1(1)                                --------->ATERF1(1)    --------->ATERF1(1)            <---------ERF1                                ------>NtERF2          <---------LBD16                <---------RAP2.3(1)                                <---------ABI4(1)     <---------RRTF1(1)              ------>NtERF2                                --------->RAP2.3(1)   ------>NtERF2                   <---------ORA47(2)                               <---------RAP2.3(1)    <---------ERF1                  <---------DEAR4(2)                               <---------ATERF1(1)    <---------RAP2.3(1)            <---------RAP2.3(3)                              <---------RAP2.3(2)    <---------RAP2.3(3)             <---------RRTF1(3)        <----------ID1        <---------RAP2.6(2)    <---------DREB2C(2)             <---------RAP2.3(2) ------->ALFIN1               <---------DEAR3(1)     <---------RRTF1(2)              <---------ANAC46 --->At4g35610               <---------LBD16         <---------RAP2.3(2)             <---------DEAR3(1) --------AtMYB61         --------->ARR14(2)          <---------RAP2.6(2)             --------->DEAR3(1) XXXXXXXXMIR396A         <---------ARR14(2)          <---------RRTF1(3)            <---------RAP2.3(1) XXXXXXXMIR396B          <---------GLK1(2)           <---------DEAR3(1)            ------->GAMYB ----At4g35610        --------->HSFB2a(2)           --------->RAP2.6(3)          <---------At5g28300- ----ZAT2             <---------HSFB2a(2)          --------->MYB52(1)           --------->MYB52(1)  = --->ZAT2            <---------LBD16              ----------->HVH21   --------->ICU4<---------ABI4(1)   tgtggtgagagggacgagacatttctggattcgcggcggcgaaaactgagaaatgacggcggagagtacgaactgatgagattaacggcggcgatgatgt  18892900                                  <------NtERF2                                <---------DEAR3(1)                             ==========================MYC_MYB                             ==========================MYC_MYB                             --------->bZIP60(2)                             --------->O2                             --------->ANAC46                  *TSS                                <-            --------->ANAC46 <---------TGA1a                   --------->MYB52(1)               <----            --------->ANAC58 --------->TGA1a                 <---------MYB46(2)                <-----      ------>NtERF2        <---------ALFIN1            ------->TEIL                     <-----------RAV1(1)  --------->DAG2        --------->REM1(1)              --------->ARR14(2)          --------->TOE2(3) ---bZIP60(2)        <---------ANAC58                  <---------ARR14(2)    --------->ANAC58  ------ ---REM1(1) --------->ANAC58 <---------O2      --------->TOE2(3)           ---------->DOF2    <------ --------->DOF2      <---------ANAC58         --------->MYB46(3)  ------->GAMYB ----------->RAV1(1)-- ======================================bZIP_DOF------->GAMYB <---------MYB59 --------->ANAC58 -------   ggcaaaggcgactctcgccatttgcttcaccacgtcgtcgttttggtaaccacaacgaatttgcctaaccgaaaaaacaaagcaacatttatgtggtcgg  18893000                                                  <---------ARR11(3)                                            <-----------GT1                                           <---------YAB1                                         --------->YAB1                                        <---------YAB1                                     --------->AHL20(2)                                     <---------AHL20(2) --------GLK1(1)                  <---------ARR11(3)           <---------At5g28300            <------ --NtERF2                         --------->ARR11(3)           ---------->DOF2               -------- ----HSFB2a(2)      ---------->DOF2  <---------YAB1      ------>ZmHOX2a(1)                <---------RAP2.6(2) --->HSFB2a(2)     --------->YAB1 <---------AHL20(2)    --------->TOE2(3)                <---------LBD16 ---LBD16         <---------ATHB12--------->AHL20(1)   <---------ICU4               ------->GAMYB ------->GLK1(1)--------->WOX13(1)--------->AHL20(2)  <---------YAB1             <-----------GT1 -->ETT(1)    ------------>CBF    <---------AHL20(1)--------->YAB1            <-----------GT1<-------   gaaatctaaactaatttgcaatcaaagcccttgaaatatattattataacaaaatcatccttacttacagcgactacatttttcaaccctatgcggctat  18893100                                                                                             --------                                                                                        --------->ANAC58                                                                               --------->ALFIN1                                                                            <---------DEAR3(1)                                                                           <---------LBD16   --------                                                --------->ZAT14      <---------ICU4<---------WRKY18(1)      <<<<<<<<<<<<<<<<<LFY         <----------DOF2                  --------->MYB46(3)  --------->ANAC58     <------ZmHOX2a(1)             <---------DAG2         <----------DOF2 <---------ANAC46 ---------- ----TaMYB80                    <---------ALFIN1<---------ZAT14     --------->ICU4--------->WRKY45 ->ARR14(2)                <-----------GT1      <---------REM1(2) <-----------GT1 --------->WRKY12 --ARR14(2)            <----------DOF2        --------->ZAT14  --------->ANAC55(2)--------->WRKY38(1)   gcccgtaggaacaatgggccttgggcttttatccccactttttgcaactgtacactgtgtctttcatgtaaccattacgcggtgttgaccaagaaaagcc  18893200                                                                                =====================                                                                                ----------------->AGL1                                                                                <-----------------AGL1                                                                                <-----------------AG                                                                                ----------------->AGL2                                                                       ----------->HVH21                                                                      <-------MYC3                                                                      ------->MYC3                                                                      ------->PIF5                                                                      <-------MYC2                                                                      <-------PIF5                                                   <----------DOF2    ------->MYC2                                                   ============================bZIP_DOF                                                  <---------ANAC58   --------->TGA1a                                                  <---------ANAC58   ===============bZIP_DOF    <---------ARR14(2)                     <---------YAB1            <---------O2<---------------AGL15    --------->ARR14(2)                   <---------AHL20(2)          --------->O2--------------->AGL15   <------ZmHOX2a(1)                    --------->AHL20(2)           <---------TGA1a ->ANAC58                               <---------AHL20(1)           --------->ANAC46   <------MYB83 ->ANAC58          --------->ZAT6       <---------AHL20(2)         <---------ALFIN1    --------->MYB59 >DOF2          <-----------GT1         --------->AHL20(1)--------->ZAT6 ---------->DOF2<------MYB46(1)   agagaggatttgatatttttaccactaaatgactaaatgcaatttattagtagcttttgaacacttcatccacgtgaaagtctcccaatttggtcatttc  18893300                                                  <---------ICU4                                           <---------TOE2(3)                              <---------DAG2----------->GT1                              <----------DOF2    --------->ICU4                  --------->MYB52(1)       <---------YAB1                           <-----------GT1                  <-----------GT1          <---------TOE1(3)                   <---------YAB1              <---------AHL20(2)     <---------------AGL15 ---------->DOF2   <-----------GT1             --------->AHL20(2)     <---------AHL20(2) <---------ANAC55(2)   --------->YAB1 ====================================================MADS_MADS           <---------YAB1      <-------   tatgtattagttgtattaaataacgaaatcaactttatattttttatggtaaaaattatgtaaaagtcaaattttctaattacaatttacaaaatttaca  18893400                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                              ----------->RAV1(1)                                                                             <---------ALFIN1  ------                                                                             --------->AtMYB61 ------                                                       <----------DOF2       --------->DEAR3(1)------                                                   --------->ZAT14          --------->MYB46(3) ------                                                 --------->At5g28300      --------->AtMYB61   -------                                              ------>NtERF2               --------->DEAR3(1)  -------                                              --------->LBD16             <---------ALFIN1   ------>NtERF2              <-----------GT1                --------->ANAC46            --------->MYB46(3)  --------       --------->MYB46(3)   <---------At4g35610  --------->LBD16      --------->MYB46(3)    ---------      -------->P        --------->ANAC46     --------->DEAR3(1)   <----------DOF2  <---------ALFIN1     --------->MYB52(1)<---------REM1(2)    <---------LBD16   ------>ZmHOX2a(1) --------->AtMYB61   < ----GT1     <-----------GT1--------->At4g35610 <---------ANAC46  <---------DAG2<---------ALFIN1<----   cattgactaaccaatttaacccctctactcagctattgaactcaactccgccgtgaactttctcctccctttaccaccaccaccacaacctcttccgccg  18893500  Previous    Next  AGI:  At3g50790.1    Description:  late embryogenesis abundant protein, putative / LEA protein, putative. similar to embryogenesis-associated protein-related [Arabidopsis thaliana] (TAIR:AT5G49950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62918.1); contains InterPro domain Protein of unknown function UPF0017, hydrolase-like, conserved site (InterPro:IPR000952); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain AB-hydrolase YheT, putative (InterPro:IPR012020) Range:  from: 18890904    to: 18892963    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g50800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41608.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45438.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61825.1) Range:  from: 18893285    to: 18893980    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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