Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   <-                                                                                      <---------At4g35610                                 <------ZmHOX2a(1)                                    --------->At4g35610                               <---------TOE1(2)                                   <-------TEIL  ----                          <-----------HVH21                                 <---------MYB52(1)  <----                         --------->DEAR3(1)                     -------->P <-------GAMYB   --------->ANAC58                        --------->MYB46(3)               --------->YAB1   <-----------RAV1(1)   -----        <-----------RAV1(1)    <---------TOE2(2)    ----------->GT1    --------->GLK1(2)   --------->ANAC58 -------DAG2            --------->DEAR3(2)         --------->ZAT6     <---------GLK1(2)  --------->At4g35610   ccttttgcctctgtggtctctcttgaaccgtcgcaggaacagcaatactatgaacagtatcaaaactacccaaattctgttgagtttcatcagaagcaat  18888100         --------->YAB1    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  ------->TEIL  --------->ARR14(2)                                                       <---------ANAC46  <---------ARR14(2)                                                       <------MYB46(1)  <---------AGP1                            <-------GAMYB                  <------MYB83 ------->ANAC55(2)                         <---------MYB46(3)     <---------ANAC58 --------ANAC55(2)                --------->LBD16                 <---------ANAC58 ----->MYB52(1)                   ------>NtERF2         <------ZmHOX2a(1) <---------MYB46(3) -----ATHB12                    <---------LBD16      <-----------RAV1(2)  --------->MYB46(2) ------>HVH21         ----------->GT1    <------ZmHOX2a(1)        <---------ANAC46           --------   gacggatctaatagtagtcgaagatggtttcttctccggcttaggaggttgaagagcaggagaagattgcttgtgtttggtgagagagttgtgagattta  18888200                                                                 --------->KAN4(2)                                                                --------->HSFB2a(1)                                                                <---------HSFC1(2)                                                                --------->HSFC1(2)                                                                <---------HSFB2a(1)                         <------ZmHOX2a(1)                      --------->KAN4(1)                   <------ZmHOX2a(1)                       --------->HSFB2a(2)                ===========================RAV<------ZmHOX2a(1) <---------KAN4(1)                <-----------RAV1(2)        <-----------RAV1(2) <---------KAN4(2)              ----------->RAV1(1)       --------->TOE1(3)--------->MYB52(1)                    <-----           --------->ANAC58       --------->ANAC46    <---------At4g35610            <----------DOF2           --------->ANAC46    ========================RAV <---------HSFB2a(2) <---------MYB52(1) ->CCA1(2) --------->ANAC58    ----------->RAV1(1) <---------At5g28300------>ZmHOX2a(1)        <-----   agagtcttttgaaacgcaacaggagaaggacaacaccagaaaccttcaggagttacagctactggaacattcctaatcttcgtttgcctttgttctactt  18888300                                                                --------->ANAC46                                                                --------->ANAC58                      ----------->GT1                           --------->ANAC58              --------->LBD16                ---------->DOF2  <---------ALFIN1              ------>NtERF2               --------->TOE1(3)   --------->ANAC46             --------->ANAC46         ---------->DOF2     <-----------HVH21          --------->TOE2(3)            <---------LBD16         --------->ANAC46     <----------DOF2             --------->TOE1(3)        <---------ARR11(3)        --------->ANAC46      <---------DAG2               <---------MYB59 -----DOF2------>ZmHOX2a(2)       --------->ANAC58   <-----------GT1   ---------->DOF2 ----DAG2<---------GLK1(1)        --------->ANAC58<----------DOF2     --------->AHL20(2)         <---   tagcattcttgatctccgccattgttgttaaaacacacacaaaagcttaaagctttcacctttcacacaccattaaagagacacaaacctaaacagagag  18888400                                                                                          --------->ATHB12                                                                                          <--------ATHB1                 ----------->GT1                                        --------->ZAT2   <---------YAB1               <---------ANAC46                                         --------->At4g35610             <---------LBD16                                            <---------ZAT2   --------->ICU4    --------->ANAC58      --------->ANAC58                              <---------At4g35610    --------->ANAC58      --------->ANAC58   --------->YAB1     --------->YAB1 --------->REM1(2)   -- ---ZmHOX2a(1)<---------ANAC46          --------->AHL20(2)    ------->TEIL  <---------ANAC46<--------   gagaacaagtcaatttggggggaaaaacaagaaccctagaaaaaaaatcagaaatttgtagatgaatcaaaaacagctgtgtgtagaatgaatgattgga  18888500                                                   <---------YAB1               ---------->DOF2                   --------->YAB1          <---------ANAC46                   <---------YAB1     -------->HAHB4                        ----------->GT1     <---------ICU4                      --------->YAB1  --------->ARR11(3)     --------->YAB1                     <---------ATHB51 <---------ARR11(3)    --------->ICU4              ----------->GT1 <---------YAB1               --------->ANAC58       -    <---------ATHB51   ---------->DOF2--------->YAB1     <---------GLK1(2)   --------->ANAC58   ----- --------->GT1 *TSS   --------->YAB1------------>CBF    <---------RVE1(1)  ---------->DOF2  <-------- -WOX13(1)----------->GT1       --------->YAB1  --------->ICU4   ---------->DOF2         ---------->DOF2   gaggtaataatggtgtttaaagaatcaaagtttatagtaacaataatgtgattataagagatttttgaaaagaagagaaaagccaaaactataaagaaca  18888600                                                    <----------DOF2                                                    <---------DAG2                                           <---------ARR11(3)      ------>ZmHOX2a(1)     --------->CCA1(2)                    <---------CCA1(2)   ---------->ID1                        < --------->DOF2                         <---------DAG2<-----------GT1                        <------- ----->DOF2              ---------->ID1 <----------DOF2   <----------DOF2                    <------- --ID1  <-------TEIL <----------DOF2   --------->TOE2(3) --------->TOE2(3)                  <--------   aagaaagagatgcatcaaatggcctttgtctctctacgattcctttatcttctactttacctttgtctcctctcttctctctctctctctcttcgcatga  18888700    --------->ATHB12                                <----------DOF2                           ------>NtERF2    <---------ICU4                                  --------------->AGL15                    --------   <---------YAB1                                   <---------------AGL15                    --------   --------->ICU4                          --------->ARR11(3)                                -------- ---------YAB1                             <---------ARR11(3)      <----------DOF2           -------- --TOE1(2)                <----------DOF2  <---------AHL20(1)      <---------DAG2            -------- --TOE2(2)             <---------PCF2      --------->AHL20(1)<---------ICU4                <---------ALFIN1 -AtLEC2          <-----------RAV1(1)     --------->YAB1 ---------->DOF2       ----------->HVH21   ttttgatgattacatgtaatttgtgggccttttttgttgaacaaaaatattcttctttaaaaagcattactttatttctcagtgaccagacagccacgcc  18888800                                                    ----------->GT1                                                   <---------YAB1                                 <--                                     --------->AHL20(2)                                  <---------TOE1(3) ->O2                                --------->AHL20(1)                                  <---------TOE2(3) ->bZIP60(2)                         <---------AHL20(2)                                 ---------->DOF2 ->ANAC58                <---------ATHB12  <---------YAB1          --------->WOX13(1)--------->TOE2(3) ->ANAC58           >>>>>>>>>>>>>>>>>LFY<---------YAB1            <---------AHL20(2)----------->GT1 ->ANAC46           ------>ZmHOX2a(1)<---------AHL20(1)  ---------->DOF2 <------ZmHOX2a(1)      <----   atgtccatttctctctctcatcctccaatgttttgaaaatttattattagtatatgattaaaagagaataaatcaggaattttgaaatgttaaagttgat  18888900                                                                                            <--------                                                                                            <--------                           <---------ARR14(2)                                               <--------                     <---------PCF2                                --------->ICU4        <----------DOF2                     ----------->HVH21 <----------DOF2             <---------YAB1  --------->AtMYB61 -------ANAC46    --------->ALFIN1 <----------DOF2      --------->GLK1(2)         --------->MYB46(3) -----ANAC46 <-------TEIL  --------->ARR14(2)          <---------GLK1(2)         >>>>>>>>>>MYB80   <-   gtgtgtttgtttatgttcatgtggggacagttcttctctttcttttgtgagttttgagattcttgagtaatgcttataaaacaaaccatcactttcttgt  18889000  Previous    Next  AGI:  At3g50780.1    Description:  protein binding. similar to PRLI-interacting factor-related [Arabidopsis thaliana] (TAIR:AT1G63850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22924.1); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333) Range:  from: 18886380    to: 18888515    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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