Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ----------->GT1        <---------O2     <---------ALFIN1        --------->O2   ------>ZmHOX2a(1)  ----------->HVH21<---------ARR14(2)  <---------ETT(1) --------->ARR14(2) --------->SPL7--------->At5g28300              --------->ANAC58 ----MYB46(1)<---------ANAC46                   --------->ANAC58       ------>ZmHOX2a(1) ----MYB83 --------->MYB52(1)                 --------->MYB52(1) <-----------GT1                 <--- ----->MYB59--------->RAP2.6(3)          <----------ID1         <-----------GT1                 <---- >ARR11(3)----------->HVH21            ---------->DOF2 --------->AHL20(2)             ----------->GT1 -ARR11(3)----------->TGA1           <----------DOF2   <---------AHL20(2)           ---------->DOF2<-   tggtccgacaacgtgacggtaaatcctccactgtcttcgcttaaagacaaacgacaattaatctttttaactcctcgtttcacttgcaaagttatttcat  18851000                                                                         <-------GAMYB<---------bZIP60(2)                                                     <-----------HVH21  --------->MYB52(2)                                                    ------->GAMYB       --------->MYB46(2)                                                 --------->MYB52(1)     <---------MYB46(3)     ------                                              --------->YAB1          <---------MYB52(1)      <------                                            <-----------GT1           <--------P      --------->bZIP60(1)         --------->ZAT14                 ----------->GT1            <------MYB46(1)   <---------bZIP60(1)         <---------ZAT18                 --------->YAB1             <------MYB83 --------->ANAC55(2) ------ICU4                          <---------AHL20(2)         <---------ARR14(2)    <---------O2 -- -----YAB1                           <---------YAB1<------------MYB.PH3(1)       <---------ANAC55(2) --------YAB1                       <---------AHL20(2)          --------->ARR14(2) ----------->HVH21   cattttagtagtttactctcattctactaaatttgtatttttattgtaacataacggtcatatcagtatttggttagttgattatgtgacatgactatgg  18851100                                                                    <---------------AGL15                                                                    --------------->AGL15                                                                   <-----------------AGL1                                                                   <-----------------AG                     ================================================================MADS_MADS ----->GT1           --------------->AGL15             <---------DAG2           --------->ICU4 ---TOE2(3)     --------->GLK1(1)                      <----------DOF2     ----------->GT1        <-- ------->YAB1   <---------GLK1(1)            XXXXXXXXXXXXXXXXXXXXX>MIR848 --------->DAG2----------->GT1   ataataagacttgatatgaattcccatatataagaaatcgtcgatgacataaaactactttatctactaacttcataaggcaaaaatgagtagataatta  18851200                                                                                               ------                                                                                             --------                                                               --------->CCA1(2)             <-------                                                              <---------ARR11(3)          --------->ANAC58      ---------->DOF2                                         --------->ARR11(3)   --------->ANAC58  <---------YAB1         <---------WOX13(1)             <---------YAB1             --------->ANAC58 -------GLK1(2)      --------->YAB1             xxxxxxxxxxxxxxxx>smallRNA(i) <<<<<<<<<TAC1--------->ANAC58   gattattagaaagagagagacaatgagattgatattttttatatgggagtccaaaatcaagatagatatacttgaaaacactcgaaccccacaaggatcg  18851300                                       --------->AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(2)                   --------->At4g35610 <---------AHL20(2)         <----------DOF2   <---------AHL20(2)  --------->AHL20(1)       --------->AHL20(1)                --------->CCA1(1)  <---------ARR11(3)       --------->AHL20(2)                --------->RVE1(1)  <---------AHL20(1)      --------->AHL20(2)             --------->AHL20(2)             ----------->GT1 >ZmHOX2a(2) ----------->TBP  <---------AHL20(2) --------->ARR11(3)              ----------->GT1 ---- ->ARR14(2)  --------->AHL20(2)<---------AHL20(2)--------->GLK1(2)           --------->DAG2  -------- --ARR14(2)  <---------AHL20(2)--------->AHL20(2)<---------ARR11(3)         ---------->DOF2 *TSS <---   acaaaatatttctttttaaatagctcaaaaaaattatttaaaaaaattcaaaatctttttaaaatatccaaaatgttgaaaagttgtaaatcgataaaag  18851400           -------->HAHB4                                                                  ------>MYB46(1)           <--------ATHB1                                                                  --------->ANAC58           --------->ATHB51                                                                ------>MYB83           --------->YAB1                                                                  --------->ANAC58          <---------YAB1                                                                 <---------ALFIN1          <---------ATHB51                                                               --------->AtMYB61          --------->ICU4                                                                 --------->DEAR3(1)        <---------ICU4                                                                  --------->MYB46(3)       --------->ICU4                                                                  ------>NtERF2       <---------YAB1                                                            ---------->DOF2     --------->YAB1                                                            ---------->DOF2   --------->AHL20(2)                                                         ------->GAMYB--------->ANAC46   --------->AHL20(1)                                                     --------->MYB46(3)  --------->YAB1                                        <---------HSFB2a(1) --------->ANAC58 ------->GT1                                            --------->HSFB2a(1) --------->ANAC58--------- -->DOF2--------->YAB1                           ---------->DOF2    <---------LBD16  --------->MYB46(3) -------ID1<---------ICU4    ---------->DOF2  >>>>>>>>>TBF1   <----------DOF2--------->MYB46(3)   agaaaaataataataattgtgccaatagagagaaagagagagacagaagaagaaagaaaggttcctttgtctcggaacaaccaaagagccaccacccaaa  18851500                                                 --------->ANAC58                                                 --------->ANAC58                                              ----------->HVH21                                            =========================================bZIP_DOF                                            --------->ANAC46                                            --------->ANAC58                                            --------->TGA1a                                            --------->ANAC58                                            <---------TGA1a                                  --------->ANAC55(1)                                  --------->ANAC58                                  <---------ANAC58                           ===========================bZIP_DOF                      <---------ANAC58                           <----------DOF2  <---------O2                           <------NtERF2               <----------DOF2    --------->ANAC58  <---------DAG2                ------>NtERF2               <---------DAG2     --------->ANAC46------>NtERF2                  <---------DEAR3(1)        <-------TEIL   ===============================bZIP_DOF                  --------->SPL7      <    --------->DAG2     <----------DOF2      --------->O2     <<<<<<<<<TBF1    ----------->HVH21------  ---------->DOF2   <-----------GT1   <---------ARR11(3)   <------------------------ANAC81   <------- >MYB46(3)     =======================================bZIP_DOF            <----------DOF2--------->ZAT6   aaaaaaaaggttcttagctttttttctttctttcacacgaaatctcacgagacgccttatttcttcttctctgtctctttccgacggcgtaactctccgg  18851600                                                                                                <----                                                                                                <----                                                  <---------AHL20(2)                           ------       <---------At4g35610                       <---------AHL20(1)                            ------       <---------ZAT2                            <---------AHL20(2)                            ------       --------->ZAT2                           --------->ICU4                                 ------       --------->At4g35610             <---------AHL20(2)                   --------->YAB1---------->DOF2 ---------GLK1(2)                      --------->AHL20(2)        --------->AHL20(2)  --------->YAB1 --->LBD16       --------->ZAT6      <----------DOF2           <----------DOF2      <---------YAB1 -- --LBD16        <---------YAB1  <---------AtMYB61--------->AHL20(2)        <---------ATHB12--------->DAG2   tggaatctcagctctcttatcagtagaagaagttttggtctttaaatgtaatttttttggttttgctttaaatttcaatcgttgttatcagaaaaagtag  18851700             <---------CCA1(1)           <---------ZAT2            <---------ARR11(3)           --------->At4g35610      ---------->DOF2   --------->DAG2   <---------At4g35610 --MYB46(1) <---------GLK1(2)    --------->ATHB12 --MYB83    --------->ARR11(3) <---------WOX13(1) --->MYB59 <---------RVE1(1)  <---------ARR14(2)              --------->YAB1 --->MYB111(1)         ---------->DOF2 <--------P            <---------YAB1                 <-------- --->MYB46(2)<---------RVE1(1)--------->ARR14(2) --------->MYB52(1)                       ---------->DOF2 --->MYB111(2)      --------->ANAC46  <---------MYB52(1)<------ZmHOX2a(1)              --------->TOE1(3) --------->GT1    <-----------GT1<---------WRKY18(1)------->GAMYB       ----------->GT1--------->TOE2(3)   gtagcaaaaaaagagattttttacgaaaagcagattgactggtagctgaaacaacggaggagaattatagaaacgagtaaaaaacaaaaccctaaaggtt  18851800                                                       <-----------GT1                                                    --------->TOE2(3)      <---------WOX13(1)                   <---------AHL20(2)                        --------->ANAC58     <---------ANAC58        <---------AHL20(2)<---------AHL20(2)                    --------->ANAC58     <-------GAMYB    <---------At4g35610  --------->AHL20(2)    <-----------GT1    -----------------     <---------ANAC58 --------->At4g35610 --------->AHL20(2)<----------DOF2   --------->GLK1(2) -TOE2(3)      --------->AHL20(2) <-----------GT1   --------->YAB1         <---------TOE2(3)      ---   gaaacttggttgacgaaaaaaatgagctgatttttttttcttcatttatttcattcttaactctttttcacatatttaagaatcagtaagaaacaaaaaa  18851900  Previous    Next  AGI:  At3g50700.1    Description:  ATIDD2 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 2); nucleic acid binding / transcription factor/ zinc ion binding. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G66730.1); similar to unknown [Solanum melongena] (GB:ABU45176.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 18851392    to: 18853931    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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