Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                             --------                                                                                        <---------ZAT18                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                <-----------HVH21   -                                                                       ==============================                                                                       ------>ZmHOX2a(1)--------->ZAT14        --------->At4g35610                  -------->P               --------->TOE2(3)<------ZmHOX2a(1)        <---------At4g35610     ---------->DOF2------->GAMYB          --------->TOE1(3)==============   cattcccttcagcatcagtcttatctaaatacttcaaagttttaatcaacccaaaaaccctagatcgataatccttaagcctagtcacaggacactcata  18847700                                                        --------->ARR14(1)                                                 --------->MYB52(1)                                                ------->GAMYB                                               --------->MYB46(3)                                               <---------MYB52(2)                                           ====================HOX2a_HOX2a                                           =====================HOX2a_HOX2a                                          --------->TOE2(3)                                       --------->AGP1  <---------ARR14(2)                                       <---------GLK1(2)<------ZmHOX2a(2)                            ---------->DOF2------>ZmHOX2a(1)                                        -             --------->ANAC58          <---------ARR11(3)                                           < <------ZmHOX2a(2)       ------>NtERF2 --------->ARR11(3)   <---------MYB52(1)                      < -------->ARR11(3)       --------->LBD16 ------>ZmHOX2a(2) ----------->GT1                    ------- ->YAB1      --------->ANAC58          --------->ARR14(2)  --------->LBD16                    ------- -------->AGP1    --------->REM1(1)  ----------->ARR10 --------->ARR14(2)                  <---------ATHB12 =======HOX2a_HOX2a     --------->ANAC46<------ZmHOX2a(2)<---------LBD16             --------->MYB52(1) =======HOX2a_HOX2a    <---------LBD16 <---------ARR14(2)------>ZmHOX2a(2)        --------->ANAC46  -   cagatcaagagacacaagcttcaactccgccaaaggagctagatcctcaacaaactggatccggttattagataaatccaaatcacagaacgaatcaagc  18847800         --------->ANAC58         --------->ANAC46         --------->ANAC58          <---------GLK1(2)    --------->REM1(1)   ------>MYB46(1) -------->At4g35610     ------>MYB83 ---------ZAT2         --------->MYB52(1)                <---------HSFB2a(2)           --------->LBD16 ---------At4g35610    ----------->RAV1(1)               ----------->GT1              --------->HSFB2a(2) -->ANAC58            --------->AtMYB61       <---------TOE2(3)    --------------->AGL15 -->ANAC58 <---------GLK1(2)    ------>ZmHOX2a(2)        --------->HSFB2a(2)<------ZmHOX2a(1) -------->ZAT2       --------->MYB46(3)       ----------->ARR10 <-----------GT1       <---------HSFB2a(2)   ccagcttcaacaagaaactctaaaccaacagtgatccgattatcagataagattagcttctgtaaattaccaagtctaggaaactgttccagagaagaaa  18847900                                                           <---------MYB46(3)                                                        <---------MYB46(3)                                                       <---------DEAR3(1)                             --------->GLK1(2)         <---------AtMYB61                            <---------ARR14(2)         --------->ALFIN1                            <---------GLK1(2)   --------->ZAT6                          ----------->RAV1(1)                     --------->At4g35610   --------->HSFB2a(2)                        --------->ZAT14                   --------->ARR11(3)    <---------HSFB2a(2)               --------->ANAC58               ---------->DOF2           --------->HSFB2a(2)               --------->ANAC58        <---------At4g35610 --------->ARR11(3) <---------ZAT14   --------->ANAC46     --------->At4g35610        --------->At4g35610 --------->ARR14(2) --------->ZAT18 <---------DOF5.7(2)  --------->ANAC46       --------->MYB52(2) ----------->ARR10<---------HSFB2a(2)<---------WRKY12    <-----------GT1<---   caccgatgttagctacagaaagatgctgaagattctgaaacttctcgagaacactaggtggtggtaaacgtccctgaacgcatttcacagcaccatcaag  18848000                     ------>MYB83              <---------MYB59              <---------MYB52(2)                                                             --------             --------->At4g35610                                                        ------>MYB46(1)         <---------REM1(1)                                                              ------>MYB83       <---------ANAC58                                                                <---------ALFIN1       <---------ANAC58      <-----------GT1                                       ------>MYB46(1)       <---------ANAC46      <---------WRKY18(1)                                   ------>MYB83      <-------TEIL   ------>MYB46(1)<---------HSFB2a(2)         <-----------ARR10<---------MYB59<----   <---------ANAC58  <---------ARR14(2)                        <---------CCA1(2) --------->AtMYB61---   <---------ANAC58  --------->ARR14(2)             <---------At4g35610    --------->YAB1 --------->TOE1(3) ------ZAT6  <---------At4g35610    --------->HSFB2a(2) <----------DOF2 --------->WOX13(1)--------->TOE2(3)   tgttagcgttcgtgtagctaacctatctgtttgaccatctagagccgcttctacagctctttcccaaatctcatccatcaaaaccaaacccaccttaaag  18848100      <---------ALFIN1                                                                     ----------     ------->GAMYB                                                                         <-------GAMYB    <---------ALFIN1                                                                 --------->DAG2   --------->ZAT14                                                              <----------ID1 --------->ANAC46                                                 ------->GAMYB----------->GT1 -->DOF2                                                       ----------->RAV1(1)  ---------->DOF2 -----At4g35610                 --------->At4g35610         --------->YAB1    ----------->GT1 ------>ZAT18                   --------->ZAT2         ----------->GT1     ---------->DOF2-----------   ctcacaacacaccttctctctgaaaacagagaacagcttcgaaactcgctgagaagaaggtatcacaacagagcgaagaaaggggaaaaagagggttaaa  18848200                                                                                                    <                                                                                                  ---                                                                                                  ---                                                                                                -----                                                                                                <----                                                                                        --------->LBD16              ------->TEIL                                                             --------->HSFB2a(2)    --------->ARR11(3)                                                                 <---------HSFB2a(2) ->GT1     <---------YAB1           --------->ATHB12                <----------DOF2   <---------LBD16 >GT1 <------------CBF           --------->CCA1(2)     --------->YAB1                --------->MYB52(1)   acagaagaaattgatgaatatcgatgaagggtaagagatgatttgaagaacccagaatcaaaaactctctcttttgaaaaatttctctaccggaaaaacc  18848300                      <------NtERF2                    --------->ANAC46                                                                -                --------->MYB46(3)                                                                ---              ----------->RAV1(1)                                                                <---        <-----------HVH21                                                                       <----     --------->SPL7 --------->RAP2.6(2)                                                         ----- <---------------AtSPL3                                                                         <---- <---------------AtSPL8                                                                        ------ ------------------SPL14                                                                 <---------WOX13(1) --->MYB83<---------WRKY38(1)                         ------>MYB46(1)                  --------->ATHB12 --->MYB46(1)--------->AtMYB61                        ------>MYB83     <-----------RAV1(1) <---------LBD16 ---->TOE2(3)<---------ALFIN1           <------ZmHOX2a(1)<------------CBF             <---------AHL20(2) -----MYB59 --------->MYB46(3)    --------->O2      <---------MYB59  <----------DOF2 <---------WOX13(1)   taatttgtacggtcaccaccagtcgccactaaaacctcgtgaggaagacgaaaacctaacattgttttgttctttgttgggctcttaattgattggggaa  18848400                                     <---------MYB46(3)                                    <--------P                                   <-------GAMYB                                   <---------ANAC46                                   <---------ANAC58                                   <---------ANAC58                                  <------MYB83                                  <------MYB46(1)                                <--------P                               ----------->GT1          <---------ANAC46      --------->ALFIN1                    <---------ANAC58        <-----------HVH21      <---------MYB52(1)                   <---------ANAC55(1)   --------->ARR14(2)         --------->ALFIN1                      --------->ANAC55(2)   <---------ARR14(2)        <---------MYB46(3)                     <---------ANAC58 -------->MYB59          <---------PCF2                            <---------TOE2(3) ------>GLK1(2)          --------->TCP20                     --------->AHL20(2) ------ARR14(2)          ----------->HVH21                   --------->ATHB51 -----HSFB2a(1)       --------->ALFIN1                       <---------AHL20(2)                    <- ---->GLK1(1)      --------->DAG2--------->MYB55(2)   <---------ANAC46--------->ALFIN1    ---------->DOF2 -----GLK1(1)     ---------->DOF2<---------MYB46(3) <---------ANAC46<---------ANAC46      =========== ----->ARR10----------->GT1 <---------ANAC46    --------->GLK1(2) <-----------GT1  <---------MYB52(1)   attcggttcgggtcgggttaaaaagtggggacgggtgggttgttttggagaattttgtgtgaattatttaacgtgttgataaaccgttggattaaagtgt  18848500               <---------ANAC58               <---------ANAC46               <---------ANAC55(2)               <---------ANAC58               --------->ANAC55(2)               <---------bZIP60(1)               --------->bZIP60(1)              <------NtERF2            --------->ALFIN1          --------->TGA1a          <---------O2          --------->O2                                                                             --          <---------ANAC58                                                                         --          <---------ANAC55(2)                                                                      <-          <---------bZIP60(2)                                                                      --          <---------bZIP60(1)                                                                      <-          <---------ANAC58                                                                         --          --------->ANAC55(2)                                                      ------>ZmHOX2a(2)          <---------TGA1a                                                  --------->ARR14(2)      ==          --------->bZIP60(1)                                              <---------ARR14(2)      --          <---------ANAC46                                       --------->ANAC58<---------AGP1    <-         ----------->bZIP910(1)                                  <---------ANAC55(2)  ---------------         ----------->STF1                                      ===========================HOX2a_HOX2a        <---------TGA2(2)                                      <------ZmHOX2a(1) --------->ARR11(3)--       ----------->HVH21         <---------WOX13(1)    <---------ANAC46   <------ZmHOX2a(1)        --       ----------->TGA1        --------->ATHB12    <---------ANAC58       ================HOX2a_HOX2a    ------>ZmHOX2a(2)      --------->ALFIN1        <---------ANAC58    <------ZmHOX2a(1)         <--- <------ZmHOX2a(1)       <------MYB83              <-------GAMYB --------->ANAC58--------->ARR14(2)== --------TOE2(3)         <------MYB46(1)          <---------MYB46(3)   ===================HOX2a_HOX2a ===================bZIP_DOF  <---------YAB1     <---------AtMYB61<---------SPL7 <---------ARR14(2)--   ttaggatcgatgacgtggcgtaatggaaggtgttgattgaattgttttgttttggttgtgtagaaggacgtaaggaggatttggatctggacaatttcga  18848600  Previous    Next  AGI:  At3g50690.1    Description:  leucine-rich repeat family protein. Identical to Probable acidic leucine-rich nuclear phosphoprotein 32-related protein [Arabidopsis Thaliana] (GB:Q9SCQ7); similar to hypothetical protein [Vitis vinifera] (GB:CAN83609.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 18845948    to: 18848078    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version