Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------YAB1            <------ZmHOX2a(2)                                     <---------TOE2(2)------>ZmHOX2a(1)                       --------->ANAC58           <---------ARR14(2)                                -                       --------->ANAC46           --------->ARR14(2)                                <         ---------->DOF2     <---------ATHB12    <---------GLK1(1)                      <-----------GT1 ---------------AGL1   --------->ANAC58      --------->AtLEC2 <------ZmHOX2a(1)       xxxxxxxxxxxxxxx -------------->AG<----------DOF2    <---------TOE1(2)=================HOX2a_HOX2a  --------->ATHB12-   tccaaattagccaaagaagtctttcaagccaataactcttatgtttcatgcaaatcctccatgaggatcaaattagggactgttcttgatttgccatttt  18770000                                         <---------YAB1                                        <---------AHL20(1)                                        <---------AHL20(2)                                    <---------CCA1(1)        --------->AHL20(2)          <---------RVE1(1)                                              <-        <---------AHL20(2)         --------->ARR11(3)                                        <-------        --------->AHL20(1)         --------->AHL20(1)                                    --------->AHL20(2) <------NtERF2                     <---------ARR11(3)                              <---------AHL20(1) ----->NtERF2                  ---------->DOF2         <-----------HVH21           --------->ARR11(3) ---------ZAT18          <-----------GT1--------->AHL20(1) <---------ANAC55(2)     <---------ARR11(3) x>smallRNA(s)           <---------AHL20(2)    ---------->ID1                      --------->AHL20(1) -------->ZAT18   <-----------GT1 --------->YAB1  --------->ICU4                 --------->GLK1(2) <-   ggcgcccaaattttttggatttactatttacttcaaagatattatatttgtcattttggtcacttaaaaactatacatttgagaatattttttatataca  18770100                --------->ZAT6                                            <---------AHL20(2)            --------->MYB46(3)                                          <---------YAB1    --------->TOE2(3)                                                 --------->AHL20(2)    --------->ANAC55(2)              <----------ID1           <---------ANAC55(2)--------->CCA1(2) --------ARR11(3)                  ------------------------>ANAC81    <---------AHL20(2) ----GT1  --------->YAB1           <---------------AtSPL8     ----------->GT1  <<<<<<<<<RAP2.2     -- --------AHL20(1)           ---------->DOF2            --------->YAB1<---------AHL20(2)--------->AHL20(2)   atatatacttaataacaaacactaaatcccaaaagaaatggaacaaaataaactcaaacataatatgtaaaattattttttagatataagaaaataacaa  18770200                                                     --------->AHL20(2)                                                     <---------AHL20(2)             ----------->GT1                --------->AHL20(2)            <---------TOE2(3)               <---------AHL20(2)            <---------TOE1(3)  ------>ZmHOX2a(1)     <---------ATHB51      --------->AHL20(2)      --------->TOE2(3)     <---------AHL20(1)     <---------AHL20(2)    --------->ARR14(2)    --------->AHL20(2)     --------->AHL20(1)    <---------ARR14(2)    <---------AHL20(2) --------->YAB1                 --     <---------AHL20(1)    <---------ARR11(3)    --------->AHL20(1)<-------TEIL                 <---- --------->GT1      <----------ID1          --------->AHL20(1) --------->ICU4                  <-----   aatgtaaaatatttaaggtaaaatgacaaaatcctcaaatgcaaaataaaataaaataattcgtattgattcatcacattatgtcttcagtttctattta  18770300                                                           --------->At5g28300                                                          ----------->GT1                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                               <                                                   --------->ARR14(2)  ==============================                                                   <---------ARR14(2)  --------->O2                <-                                                  <------ZmHOX2a(1)    --------->TGA1a<------ZmHOX2a(2)                                                <---------TOE2(3)      --------->ANAC46          ----                                              ===================================bZIP_DOF        <---                                              ---------->DOF2        --------->ANAC46<---------ARR14(2)                                           <------ZmHOX2a(1)   <------------CBF      --------->ARR14(2)         <---------ATHB12                  =================HOX2a_HOX2a--------->ANAC58        <-----    <---------ATHB12                       ================HOX2a_HOX2a --------->ANAC58------>ZmHOX2a(2) ------->TOE2(3)                       ---------->DOF2   --------->ZAT6----------->HVH21     <------- -------GT1                            ==========================================bZIP_DOF  <--------- ----AHL20(2)                        <---------TOE2(3) ----------->RAV1(1)      --------->MYB52(1)<--   acttcaatgaaatcaatgtttaacaaaaaaaaaacatttaagaaaggataaaggatccaacagtaaattgcacacgacagccaaacggatcccagtcggg  18770400                                                                                 --------->ARR14(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR14(2)                                                                                 <---------ARR11(3)     ---------->DOF2                                                            <---------GLK1(1)  ------>NtERF2                                                            --------->DAG2  ----------->RAV1(1)                                                     ---------->DOF2 <---------ETT(1)                                                      --------->ANAC58 ----------->HVH21                                                     --------->ANAC58 ------NtERF2                                                         --------->SPL7 ===============bZIP_DOF                                             ------>NtERF2 --------ATERF1(1)                             <----------DOF2       <------NtERF2=================== ----->GLK1(1)                                *TSS                  <---------SPL7<------ZmHOX2a(2) ------GLK1(1)                                <---------ANAC58     <---------ANAC58 -NtERF2                                      <---------ANAC58     <---------ANAC46------>ZmHOX2a(2) --DEAR3(1)                               <---------MYB52(1)       <---------ANAC58================== --HVH21                           ---------->DOF2                 <---------RAP2.6(2) -------ARR14(2)                 --------->YAB1<---------DAG2 <---------AtLEC2  --------->GLK1(1)   <   gctccgacaaagttttaatggtttcttaagaaaaatcaaaagccgtttgctttttttgaaatttccatggcggacgaaaaggagatcgtcgatatttata  18770500                                     <---------YAB1                                         <--------                                   --------->YAB1                                       --------->At4g35610                                  --------->ICU4                                       --------->GLK1(2)                                  <---------YAB1                                       <---------ARR14(2)                                --------->YAB1                                         --------->ARR14(2)                               --------->ICU4                                         <---------GLK1(2)             <----------ID1    <---------YAB1                                      ------>ZmHOX2a(2)        <------ZmHOX2a(1)    --------->YAB1                                       <------ZmHOX2a(2)  --------->At4g35610       --------->ICU4                                       <---------ARR14(2)  <---------At4g35610    --------->ICU4          <---------ANAC46                --------->ARR11(3) ==============HOX2a_HOX2a  <---------YAB1       <---------ANAC58                --------->ARR14(2) ==============HOX2a_HOX2a--------->YAB1         <---------ANAC58                <---------ARR11(3) -----------RAV1(2)     <XXXXXXXXXXXXXXXXXXXXMIR414       <----------ID1   >>>>>>>>>TBF1<---------At4g35610   gctcagatgaggaatacgacgaagacgatgatgatgatgatgataccgatggcgagagtagcgacgaagacgatgaagaagaagatcggaatctgaggta  18770600                                     --------->At4g35610                                    --------->GLK1(2)                                    <---------ARR14(2)                                    --------->ARR14(2)       --------->HSFB2a(2)                                ------>ZmHOX2a(2)            <---------HSFB2a(2)                              --------->ARR14(2)            <---------LBD16              --------->ATHB12<---------ARR14(2)         <---------GLK1(2) <---------ANAC58          <---------HSFB2a(2)        ------>ZmHOX2a(2)                   <---------- <---------ANAC46       <---------ARR14(2)           <---------At4g35610             <---------YAB1 <---------ANAC58  <-----------GT1 <---------GLK1(2)--------->ARR14(2)       <---------ANAC46  <----- --------->ANAC55(2)    --------->ARR14(2)          <---------ARR14(2)      --------->ATHB12  ------- -TOE2(3)    <---------YAB1--------->HSFB2a(2)      <---------AGP1 <-----------GT1 <---------At4g35610   tttgcgtatttcacgatgatttatcggttctggatcggaatctgaagttttttggatctgattctggaattactcgattcagtggagatgatagcgaatc  18770700                                        <XXXXXXXXXXXXXXXXXXXXMIR414                                    ----------->TGA1                                  <---------At4g35610                                  --------->At4g35610                 <------ZmHOX2a(1)       --------->ATHB12          <---------YAB1                     --------->ALFIN1       <---------ICU4         --------->GLK1(2)                    <------ZmHOX2a(1)      --------->ICU4         <---------GLK1(2)              --------->ICU4      <---------YAB1         <---------ARR14(2)             <---------YAB1 -----------WRI1       --------->ARR14(2)                 --------->YAB1        >>>>>>>>>TBF1 ----ATHB12            <---------ARR14(2)                <---------YAB1      >>>>>>>>>TBF1 -->GLK1(2)<---------ZAT14   --------->ARR14(2)          --------->ICU4  <------ZmHOX2a(1)          -   aagcgaagatgattacactgattcgaattcggattctgatgacgacgatgaagaagatgatgatgatgaggaggaggaagaagaagaagactcccttgtt  18770800                                                 <---------ARR11(3)                                                 <---------AGP1                                                 ------->TEIL                                                 <---------ARR14(2)                                                 --------->ARR11(3)                                                 --------->ARR14(2)                                              <---------TOE2(3)                                            -------->HAHB4                                            <---------ICU4                                           <---------ATHB51                                        <---------AHL20(2)                                    ----------->GT1------>ZmHOX2a(2)                             <---                                   <---------TOE1(3)                             <---------TOE2(3)                          <-----------GT1  --------->ICU4      <----------DOF2   <---------TOE1(3)  < --------->DAG2     <---------TOE2(3)   --------->AHL20(2)     --------------------->WRI1  ------->TEIL --------->DOF2   ---------->DOF2  <---------TOE2(3)  --------->ATHB12 <---------AtLEC2 <---------YAB1   gataaagtcactcgtctactcaaaggtttatcaatttagggtttaattatggatcttgatttgttctttgtttgcatcaatttagggtttatgaatcttt  18770900  Previous    Next  AGI:  At3g50550.1    Description:  unknown protein Range:  from: 18770446    to: 18771491    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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