Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ----------->GT1                                                      <------MYB46(1)                                                      <------MYB83                                                      <---------MYB46(3)                                                  --------->ATHB12                            --------->AHL20(2)   --------->ICU4                            <---------AHL20(2)   <---------YAB1                   ------>MYB83                           --------->YAB1      --------->YAB1               <---------SPL7                           --------->AHL20(2)  <---------ICU4      <---------YAB1 ------>MYB46(1)     <----------ID1       <---------ATHB12    --------->ICU4--------->TOE2(3)   <---------MYB46(2) ------>GT1  --------->ANAC58                 <---------ATHB51  <---------YAB1  <---------MYB59    -- ->MYB52(1)  --------->ANAC58     --------->TOE2(3) <---------WOX13(1)  <---------ZAT18    ----------   gaaaaaaaaaacaaaacgctagattccaattaaaatccataatatgaaattatgattggttaacttaatattagtggccttaccaaacaaaaaaaaagat  18764100                                                                    <-----------GT1                                                  <---------At4g35610                       ---------                                                  --------->At4g35610                       <--------                                                 ------->TEIL     -------->HAHB4            <--------                                               <-------TEIL       --------->YAB1            --------- ------->At4g35610 ------->TEIL           <---------YAB1         <---------YAB1            --------->AHL20(2) >DOF2           <---------ZAT18     <------ZmHOX2a(1)         --------->YAB1  <-----------HVH21   gacctgaaatgaaatctaatgcacattcaagagttggcaggattataaatgcatctgtatatgtataataatacaataccctgtcaatgtctattaaatt  18764200                                                             --------->MYB111(2)   --------->ATHB12      <---------AHL20(2)                                     --------->MYB111(1)  --------->ICU4     <---------AHL20(1)                                      --------->MYB52(2) --------->YAB1     --------->AHL20(2)                               <---------ATHB12          <---------ICU4     <---------AHL20(2)                             --------->WOX13(1)         <---------YAB1    <---------ATHB12                              <---------YAB1      <---------MYB52(1) --------->YAB1 >AHL20(2)               <-----------GT1        --------->YAB1       <----------DOF2    <---------YAB1 -AHL20(2)            --------->YAB1           <---------YAB1--------->MYB46(2)--------->ICU4 -AHL20(1)     ------>ZmHOX2a(1)             --------->YAB1  --------->MYB59 --------->YAB1<---------YAB1 >AHL20(1) <-----------GT1           --------->AHL20(2)   ------------>MYB.PH3(2) <---------YAB1   gttccaattaatttctcctcccaaaaataacttatccaaataaacaactataatcaatgaagttagttagcctttattttcatgatgattgtgataatac  18764300                               <---------ATHB51                               --------->AHL20(2)                               <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL20(2)                          --------->ANAC46                       <---------ZAT14                                                 ------>ZmHOX2a(1)                       --------->ZAT18                                          <---------GLK1(2)                       --------->ZAT14      --------->ZAT14                 --------->ANAC46                       <-------TEIL     --------->ANAC58        ----------->GT1 <---------ARR14(2)                  ---------->DOF2   <-----------GT1  ----------->GT1      <-----------GT1  <---------      <---------CCA1(2)<---------ZAT18  --------->ANAC58   <---------AHL20(2)   --------->ARR14(2)   caaaattcttatcttcataccaaagtacacaaaataattcacactctatagtctatagtataaatttggcaaaatttcaccgaattctcctattttctag  18764400                                                         ----------->GT1                                                         <---------TOE2(3)                                                   --------->AHL20(1)                                  --------->YAB1   --------->AHL20(2)                      --------->ANAC58             <---------AHL20(2)                      --------->ANAC46            --------->AHL20(2)    <------ZmHOX2a(1)                      <---------ANAC55(2)      <---------AHL20(2)      <----------ID1                      --------->ANAC55(2)   --------->YAB1             ----------->GT1      ---------              --------->AHL20(2)--------->ZAT14--------->AHL20(2)     --------->MYB59   <------------CBF          <----------DOF2   <-----------GT1 --------->AHL20(2)    --------->ATHB12    <---------AHL20(2)    <----------DOF2   --------->ANAC55(1)  <---------ATHB12    <-----------------AG----------->GT1<-- --GT1  ---------->ID1--------->ANAC58 ------------>CBF<---------AHL20(2)      --------->ZAT6    ----   cttcggctttgtctttttatatacacgtattaactatagtcaccaataaaaaattaattaagttaaactgattaggaaaaaacactagttaattgtgtaa  18764500                                                                              <---------ARR11(1)                                      ------->TEIL                            --------->ARR14(2)                                      <---------ARR14(2)                      <---------ARR11(3)                                      --------->ARR14(2)                      <---------ARR14(2)                                  ------->TEIL                               <---------CCA1(2)                        <---------AHL20(2)                                ------>ZmHOX2a(2)                        --------->AHL20(2)                               <------ZmHOX2a(2)      ----- -->GT1   ------------>CBF  --------->DAG2              <-----------GT1 --------->ARR14(2)   <------- -------ICU4          *TSS ---------->DOF2             <-----------GT1  <---------ARR14(2)   -------- ----->ICU4      ----------->GT1 --------->MYB52(1)<----------DOF2 <----------DOF2     <----------DOF2   ttagtagttttgttcaatgttgttaattaaaaagcgaacgtatcgtcgtttctctttttaactcattctctttggatccaaatctttcgctttggaattc  18764600                                      --------->ANAC58                   <---------AHL20(2)         <       --------------->AtSPL8         --------->ANAC58                  --------->YAB1             --      ---------->DOF2             --------->ANAC58                     <---------YAB1         <------ ---->ANAC46                      --------->ANAC58                   --------->AHL20(2)     <xxxxxxxx --GLK1(1)                     <---------KAN4(2)     <-----------GT1 --------->YAB1     <---------YAB1 ->ARR14(2)               ---------->DOF2          <-----------GT1--------->YAB1       <-----------GT1   gccattgacaaagtactcaattccaaaacaaagaataagcaaacaacaacaattttcacttccttcaaaaattataaaaatccagtttttatctttgcaa  18764700                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                   <---------ANAC58                                       <---------TOE2(3)  -------- -------TEIL       <---------ANAC58                             -------->HAHB4        <---------ANAC58 ------->CCA1(2) <-----------GT1<---------LBD16                 --------->YAB1        <---------ANAC55(1) ---AtLEC2    <---------ICU4 <---------GLK1(1)                 <---------YAB1   <---------YAB1 xxxxxxxxxxxsmallRNA(i2)  <---------YAB1                       --------->ICU4--------->GLK1(2)   gattcaaaagtttgaatttttacttgttttgatttctgggttttgtttgttttttgatttcggtaatgatacaattgagattttgatttcgtgtgatgtt  18764800                                                                                     --------->At4g35610                                                                                     <------NtERF2                                                                         --------->ZAT18                                                                  <------ZmHOX2a(1)<---------ANAC46                                                              <---------ANAC46   --------->LBD16  ---                                                            --------->LBD16      ------>NtERF2 <-----                                                            ------>NtERF2--------->ZAT14       ------     --------->TOE2(3)                                    <---------LBD16<---------ZAT18  --------->ARR14(2)   --------->GLK1(2)                               ======================HOX2a_HOX2a------>NtERF2 ---  <---------GLK1(2)                                <------ZmHOX2a(2)     <---------ZAT14  <---------ARR14(2) ->ICU4               ------->TEIL      <---------At4g35610<---------DEAR3(1)  <---------LBD16<------   gagagattcttaaatgggtctatgtacttcgaaaccgaattcatctaattccgatcaaactccggcgaggaatagtccacttccggcgtctgaatccgtc  18764900                             <------ZmHOX2a(2)                  <---------DOF5.7(2)                <---------MYB52(1)                                                 <---------YAB1        <---------ARR11(3)  --------->ARR11(3)                              <-----------GT1 ------>ANAC58  --------->DOF5.7(2)                                         ---------->ID1 ----MYB52(1)  <-------GAMYB<---------ARR11(3) ------->GAMYB   --------->DAG2   <----------DOF2    <- --->WRKY18(1)<---------------AGL15           <---------MYB52(2)           <-----------GT1         -- ------>ANAC58--------------->AGL15           --------->MYB46(3)        <---------MYB52(1)         -- -----HVH21  <-----------------AGL2----------->GT1            ---------->DOF2   <---------DAG2     <-   aagccttcgagctcttccgttaatggtgaagatcagtgtgtaacaacaacgaacaatgaaggcaaaaagtctccgtttttccctttttatagtccaagtc  18765000  Previous    Next  AGI:  At3g50530.1    Description:  CRK (CDPK-RELATED KINASE); calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase. similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G56760.1); similar to CRK1 (CDPK-RELATED KINASE 1), calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase [Arabidopsis thaliana] (TAIR:AT2G41140.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT1G49580.1); similar to CDPK-related protein kinase [Gossypium hirsutum] (GB:AAZ83348.1); similar to calcium/calmodulin-dependent protein kinase CaMK3 [N Range:  from: 18764522    to: 18767754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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