Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <------MYB83                                             <---------ANAC58                                             <---------ANAC55(1)                                  --------->AtMYB61                    >>>>>>>>>ARR1                                 <---------MYB55(2)                    >>>>>>>>>ARR2                                 <---------MYB52(2)                    >>>>>>>>>ARR1                                 --------->MYB46(3)                    >>>>>>>>>ARR2                                -------->P   <---------ANAC46       <---------TOE2(2)        <-------                              --------->MYB46(3) <---------ANAC46   <---------TOE1(2)      <-------TEIL                         <---------MYB52(1)  <---------ANAC58    --------->ATHB12        --------->ARR14(2)                       ----------->GT1       <------MYB46(1)  --------->YAB1             <---------GLK1(2)                   <---------WRKY18(1)      --------->MYB111(1)  --------->YAB1       --------->HSFB2a(2)                  --------->WRKY38(1)  <---------MYB52(1) <---------MYB52(1)          <---------HSFB2a(2)                  --------->WRKY12<---------ALFIN1     <---------LBD16<------ZmHOX2a(1)  <---------ARR14(2)                  ----------->HVH21   --------->At5g28300--------->LBD16             ----------------               <-----------RAV1(1)------->GAMYB--------->ALFIN1 <---------YAB1   ------->TEIL<-------   tgagcctcgttatacaactgttgacccgttaaacaaccaccgttattaggtgtgtgttccggtatcatcataggattgttatgcatttccagattcgtca  18756200     <---------MYB46(3)   <---------ARR14(2)    <---------AtMYB61   --------->ANAC58                                                           --    --------->ALFIN1 <---------PCF2                                                              <---    <---------DEAR3(1)  --------->ANAC58                                                    <-------- ----TGA1         --------->ALFIN1                                                  <---------At4g35610 ->AGL1  <------NtERF2 --------->SPL7                     ------>ZmHOX2a(2)         --------->At4g35610 ----HVH21      <-----------RAV1(1)         <-------TEIL <------ZmHOX2a(2)     <----------DOF2<------ZmHOX2a(1)   tcgaaggtggtggcacaaatgtggggacgatacagtaagaggcaagttcgttcttgacgatcgcgagttgttcttccaagtctttaatctgactaaggag  18756300                                      <---------ANAC58                                      <---------ANAC46                                  <---------ANAC58                                      <---------ANAC58                       --------->ARR14(2)                                --------->ATHB12                             <---------GLK1(2)                               <---------YAB1                                <---------ARR14(2)                               <------ZmHOX2a(2)                          <XXXXXXXXXXXXXXXXXXXXMIR399F                             <---------ARR14(1)                <---------ANAC58    <----------DOF2                          <---------LBD16                      <---------ANAC58    ==================      --------->YAB1    <---------WRKY18(1)              --------->ANAC46 <XXXXXXXXXXXXXXXXXXXXMIR399E --------->GT1         --------->WRKY12                  --------->ANAC58 <XXXXXXXXXXXXXXXXXXXXMIR399D ----GAMYB             ----------->HVH21                 --------->ANAC58<XXXXXXXXXXXXXXXXXXXXMIR399A -TOE2(3)              --------->WRKY38(1)          ------>NtERF2    <---------AtLEC2   <---------ANAC58   gttgtaaatgatacccagacagccattgaccggatcattggcttgaacttgtgcctcccaagcgagcgtgtccatggcaaattctctttggcatgggtga  18756400                        <---------ANAC46                        <---------ANAC58                        <---------ANAC58                    <-------MYC3                    ------->MYC3                   --------->PIF3(3)                   --------->O2                   <---------PIF3(3)                   --------->TGA1a                   <---------TGA1a                                                            -------            --------->ZAT14                         <---------ANAC46                          -------           --------->ALFIN1                   --------->MYB46(3)                        <------NtERF2           <---------REM1(1)                 ------->TEIL                             --------->RAP2.6(2)  ===========================MYC_MYB  <---------ANAC58                   <---------ANAC46     -------  <-------GAMYB    <---------O2     --------->ARR11(3)            --------->ZAT14  --------->DAG2 ============================bZIP_DOF <---------ANAC58            <---------ZAT14 ---------->DOF2   agactgttgataagtgtagccacatggcttgctccaaataccttgtgaaccgcttcgtagttgtccagtttagtcgaggggaagtaaggcgcaaacacac  18756500                                    --------->ANAC58                                   <---------LBD16                                  <---------ANAC46                             <---------ANAC58                             <---------ANAC58                             <---------AtLEC2                         <---------ANAC58                         <---------ANAC58                         <---------ANAC46                        <---------MYB46(3)                     --------->At4g35610      --------->ETT(2)                     <---------ZAT2------>NtERF2 <---------RVE1(1)       <---------ZAT18  <-------TEIL--------->ANAC58                         --------->GLK1(2) -->ANAC58           <---------At4g35610     <------NtERF2               --------->YAB1     --------- -->ANAC58         <-----------RAV1(2)     <---------ANAC46             <---------YAB1  ---------->DOF2 -->ANAC46        ------>ZmHOX2a(1)--------->LBD16      ---------->ID1--------->YAB1---------->DOF2   aatcttctgtgcattttctcctcaggtgcttgcatgccgcgcatggtgtcgatattttgtccatttgatgaaacatcataatctgtgaaagaaagaaaga  18756600                                                                                         <----------DOF2                                                                                      ---------->ID1                                                                                     <-----------GT1                          <---------HSFC1(1)                                      <---------ICU4                          <---------HSFB2a(2)                                     <---------AHL20(2)     --------------->AtSPL8     --------->ARR11(3)                               --------->ICU4     <---------------AtSPL8     <---------ARR11(3)                     --------->ANAC55(2)    <------------CBF      --------->HSFB2a(2)   --------->AHL20(2)     <---------ANAC55(2)  <---------AHL20(2)      --------->HSFC1(1)    <---------AHL20(2)    <-------TEIL--------->AHL20(2) ->DOF2             <---------ICU4         <-------TEIL  <------ZmHOX2a(1)  ----------->GT1   aaatgtaattgtacatttttgatcatttctagaatatatacaaaatacatttaaatataggatatatcgaaatacatgatgtaattttttccttttaaac  18756700                                                     ----------->GT1                                                    ------------------------>ANAC81                                              --------->ANAC46                                           <---------ARR14(2)                                           --------->GLK1(2)                                      --------->ANAC58                              --------->TOE2(3)--------->LBD16                      --------->GLK1(2)    --------->ARR14(2)                      <---------ARR11(3)  <---------GLK1(1)               ----------->GT1                     <---------GLK1(2)--------->ANAC46                  --------->DAG2                <-----------GT1       --------->ANAC58                ---------->DOF2          --------->YAB1 <----------DOF2  --------->GLK1(1)<----------ID1----------->GT1   tgaatcaaacaaacatatttacagaatctttttcttaaacacgaaaatccgaaacatgaaaaaaacaaaaacaaaagggaaaatcgtatgcctaggtcta  18756800                                ------->TEIL                            ------>MYB46(1)                            ------>MYB83                          <---------TOE2(3)               --------->AHL20(2)                                 <---------TOE1(3)      ----------->GT1     --------->TOE2(2)             <---------ZAT14                      -------- --------->ANAC58         --------->TOE1(2)             --------->ZAT14                  --------->YAB1 --------->ANAC46   <-----------GT1                     ---------->DOF2       --------->AHL20(2) --------->ANAC58   --------->YAB1 <---------AHL20(2)----------->GT1         <---------AHL20(2)    --   tacacgaactgaaaaaaaaaaatcacaacctacgaatttttatgtgaattctaaacagtaaagagattaaggtttctaaataatatagtaatcagaatag  18756900                             --------->ANAC46                          --------->ZAT14                          --------->ZAT18                          <---------ZAT14                          <---------ZAT18                   <---------------AtSPL3                  <-------GAMYB             <---------ANAC58--------->ANAC58  --------->YAB1 <---------ANAC46         <---------HSFB2a(2)                      --------->YAB1 <---------ATHB12<---------ANAC58    <---------YAB1                             --------->YAB1 -->DOF2     <---------ANAC58--------->ANAC58    --------->ALFIN1     --------->TOE2(3)            <- ------->WOX13(1)<---------ANAC58   --------->AHL20(1)--------->ICU4  --------->TOE1(3)      ------->TEIL   ccaatcaaaatcgtggattgcgttgtactgcactcaaatatgttagagaaggtgtgaagatgaaaacacaaacctcaatgcataataagaagatgaatct  18757000             ----------->RAV1(2)             --------->ANAC55(2)             <---------ANAC55(2)              ---------->DOF2             <---------At4g35610          <---------ZAT6             --------->At4g35610   <---------AHL20(2)           <-----------GT1      <---------AHL20(1)         --------->ARR11(3)     --------->AHL20(1)                                          ---------         <---------ARR11(3)     --------->AHL20(2)          <---------AHL20(2)             --------->AHL20(2)       <-----------ARR10        <---------ARR11(3)         --------->AHL20(2)    <---------AHL20(2)       ---------->TaMYB80      <---------CCA1(2)        --------->CCA1(2)        --------->AHL20(2) --------ATHB12   --------->GLK1(1)--------->AHL20(2)----------->GT1        <---------MYB52(1) ------   aatcaagcgaatatcacctgatttctaaaccctatatattaatagagataaagaatggatataaaatgaaatcaaatcggtatttatatgaaaataaaaa  18757100  Previous    Next  AGI:  At3g50510.1    Description:  LBD28 (LOB DOMAIN-CONTAINING PROTEIN 28). Identical to Putative LOB domain-containing protein 28 (LBD28) [Arabidopsis Thaliana] (GB:Q9SCS4); similar to LBD10 (LOB DOMAIN-CONTAINING PROTEIN 10) [Arabidopsis thaliana] (TAIR:AT2G23660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49760.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 18755983    to: 18756579    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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