Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------HSFB2a(2)                 --------->HSFB2a(2)           <---------------AGL15           --------------->AGL15          <-----------------AGL3          <-----------------AGL2          <-----------------AGL1     --------->ANAC58                         --------->WOX13(1)     --------->ANAC58         <---------AHL20(2)<---------ATHB12   ---------->DOF2          --------->YAB1  <---------ATHB12              <----------DOF2          -- ------->DOF2   <---------LBD16           --------->WOX13(1)           <---------ARR11(1)          -- --------AGL15--------->ARR14(2)        <---------YAB1                 --------->ARR11(3)       <---- ------->AGL15<---------ARR14(2)      --------->YAB1 ---------->DOF2  <---------CCA1(2)       ------- -ARR11(3)----------------->AGL2     <------ZmHOX2a(2)       --------->AHL20(2)    --------->AtLEC2--   aaaaggaaagctactaaatctggaaactaaaaataatcgatcatcaatcaatcactaaagcctataaatatcaaatctttttttcattcaaaaaaaaaaa  18754700                                                                                      --------->MYB52(1)     <---------DAG2                    --------->ANAC58                     --------->DEAR3(1) ------->ANAC58                    ----------->RAV1(1)                     >>>>>>>>>MYB2          <-- ------->ANAC46                 ------->GAMYB                          --------->ANAC58           --- ------ID1    ------>ZmHOX2a(1) --------->ANAC46                       --------->ANAC58           <-- --->DOF2 <-----------GT1    <-----------GT1                 --------->WRKY18(1)     <-----------GT1 ------->ANAC58          ------->TEIL  --------->ANAC58     <-----------HVH21------->GAMYB       <---   gacgaaaccttttctcctctctcgatgtatttaacagcaacaagctccttggtgactctatcggtcatgagacgagcaacgccgaaattaccagagccaa  18754800                                                                              <-------TEIL                                                                              ------>ZmHOX2a(2)                                                                              =======================                                                                             ========================                                                                             <------ZmHOX2a(2)           <---------------------WRI1                                       <---------ARR14(2)     <---------TOE2(3)                                                      --------->ARR14(2)    <---------DOF5.7(2)    <---------ANAC58                               <---------ATERF1(1)  --------->DOF5.7(2)      <---------ANAC46                              <---------TOE1(2) <----------DOF2           <---------ANAC58                             --------->ATERF1(1) --------->TOE2(3)       <-----------HVH21    --------->WOX13(1)        <------NtERF2 -------ARR11(3)        <-----------RAV1(1) <---------ATHB12            <---------LBD16        <----- ------>ARR11(3)    <------ZmHOX2a(2)     --------->WOX13(1)          <---------DEAR3(1)<---------YAB1 -------AHL20(1)  ------->GAMYB        --------->At5g28300  --------->At5g28300      <-----------GT1 ------CCA1(2) --------->MYB52(1)     ----------->GT1      ----------->GT1--------->LBD16 <---------GLK1(2)   tatctttaacgaagtcgtaacgatcactgtcgtgcataatcggtaaatcaatcggcataatcggtgaattagtcgccggatccattttttctgattcttc  18754900                                                        <---------ANAC46                                                       --------->ZAT2                                                       --------->At4g35610                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                               <---------LBD16                                              ----------->RAV1(2)                                           --------->HSFC1(2)                                           <---------HSFC1(2)                                           --------->HSFB2a(1)                                      -                                           <---------HSFB2a(1)                                      <                                          <---------ARR11(3)                                       ==                                          --------->GLK1(2)                     ----------->GT1<-----                  <---------ICU4          --------->ARR11(3)                   <------ZmHOX2a(1)   <-                 ------>ZmHOX2a(1)        <-----------ARR10              >>>>>>>>>TBF1  --------->ARR11(3)   ------>ZmHOX2a(1)                      <---------ARR14(2)          >>>>>>>>>TBF1     <---------ARR11(3) =========HOX2a_HOX2a                     --------->ARR14(2)    --------->HSFB2a(2)    --------->RVE1(1) =========HOX2a_HOX2a--------->YAB1      <---------GLK1(2)      <---------HSFB2a(2)    --------->CCA1(1) -------------------ANAC81           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ----------->GT1<-------   tcttcctctattgctcttcctaatcacatcagattaagtcgaagaatcttctggagtagctggaatctagaagaagaagaaggagaaaaatatctaagga  18755000                                                        --------->ATHB12                                                        --------->ATHB51                                                        -------->ATHB1                                                        <------------ATHB5                                                        <---------ICU4                                                       <---------ATHB51                                                       <---------ATHB12      ------->TEIL                                     --------->ICU4   <XXXXXXXXXXXXXXXXXXXXMIR865-3P                      <---------YAB1 --------->CCA1(2)                                    *TSS -------->ARR14(2)             ------->GAMYB         --------->WOX13(1) ---------ARR14(2)            --------->MYB46(3)  --------->ANAC58 ================================HOX2a_HOX2a      --------->ANAC58                          --------- -ZmHOX2a(1)               <---------WRKY12    ---------->DOF2---------->ID1         <------ZmHOX2a(1) -----ZmHOX2a(1) ---------->DOF2         ---------->DOF2<--------ATHB1         --------->CCA1(2) --TOE2(3)<---------LBD16 <------ZmHOX2a(2)<----------ID1<------------CBF   --------->MYB59 <--------   aggatatgaatttgggggaaaaagatggatcaacgacgaatgagaaagacaaaggcaattattggtcgctctctaagttagataagaggagagagatgtt  18755100                                                      ------>NtERF2                                                      <------NtERF2                                                     --------->DEAR3(1)                                                    --------->DEAR4(2)                                                    --------->ATERF1(1)                                                    <------NtERF2                                                    --------->RAP2.3(1)                                                   ------>NtERF2                                                   <---------DEAR4(2)                                                   <------NtERF2                                                   --------->DREB2C(1)                                                   <---------ATERF1(1)                                                   --------->At4g35610                                                   <---------At4g35610      ------>NtERF2                                --------->ATERF1(1)     <---------ALFIN1                             --------->DEAR3(1)   ------->GAMYB                                  <---------ATERF1(1)  --------->ANAC58                                --------->RAP2.6(2)  --------->bZIP60(2)                             <---------DEAR3(1)  --------->MYB46(3)                        ---------->DOF2                                 <--------  --------->ANAC58                      <----------ID1--------->LBD16                    --------->ARR11(3)  --------->ANAC46                      --------->ANAC58    <---------AtMYB61            --------->AHL20(1) >ARR11(3)     <----------DOF2          --------->ANAC58<----------DOF2                  <---------AHL20(1) -ARR11(3)<---------MYB52(1)<---------At4g35610  <---------RAP2.6(2)<---------AHL20(2)   <---------ARR11(3)   tgcaacgacaccgttttctttgttttagttatctgatttgatacgacaaaggccgccgcgttttggtgattttttttttttttttttcaaatattttttt  18755200                                                                ------>ZmHOX2a(1)                                                                <---------------AGL15                                                         ============================================                       <---------AHL20(2)               <---------ANAC58                      <---------AHL20(2)                <---------ANAC58                      --------->AHL20(2)                <-------GAMYB                            <---                    --------->YAB1                     <------MYB83                              <---                    --------->TOE2(3)                  <------MYB46(1)                           <---                  --------->ICU4          <-----------GT1<--------P               <---------------AtSPL8           --------->ANAC55(2)          <---------AHL20(2)      --------------->AGL15            ----          --------->MYB59    <---------At5g28300       <---------MYB46(3)         <---------------AtSPL3 -AHL20(2)<---------TOE2(3) <-----------GT1           --------->MYB59    <---------YAB1          ====   ttttggtttttttaggtatcaatattaattttactgttctatattatcaacacaatttggttgctcctaaaatttgtaattgaatgagtacgaattgtga  18755300                                 <---------ANAC55(2)                               <---------ICU4                              --------->ICU4                           <---------AHL20(2)                           --------->AHL20(2)                           --------->AHL20(1) ----------->GT1          --------->AHL20(2) ======MYC_MYB            <---------AHL20(2) ------ANAC46          <---------AHL20(2)                                                       <---- ------TGA1a           --------->AHL20(2)                                                       ----- ------At4g35610    --------->TOE2(3)                              --------->TOE2(3)           ------ ----->At4g35610 <----------DOF2 <---------ANAC46                  --------->TOE1(3)           ------ ===========================bZIP_DOF             ------->TEIL   <-----------GT1           --------->HSFB2a(2)   ggtgagtaaattgttatgtctttcttaaattaattatgtgaatgtctcatgtatatatgtattgttttaccttcacttgtacttgtttacttccaaaata  18755400           <---------MYB46(3)          --------->ALFIN1        <-----------RAV1(1)    <----------DOF2                   --------->ANAC58    <---------DAG2                    --------->bZIP60(2)            ---------->DOF2    ============================================bZIP_DOF   <---------MYB52(2)       <------ZmHOX2a(2) -----ARR11(3)                        --------->ANAC58     --------->ANAC58        <---------ARR11(3) ---->ARR11(3)                        --------->O2         --------->ANAC58        --------->ARR11(3) --->RVE1(1)        <---------AtMYB61 ==========================================bZIP_DOF --->CCA1(1)   <---------MYB46(3)     --------->TGA1a  <-----------HVH21     <---------YAB1   tcccaactttatgtgggtgattgtggtcgtattttgagccaagtcagaaattgtttttgtcacgaacaaaaaaaagcttcttatagatcatataagacgt  18755500                                                                                        <---------AHL20(2)                                                                                      <---------YAB1                           <----------DOF2                                     ------->TEIL              ----------->GT1        <---------AHL20(2)                      <---------ZAT14        --------->ANAC46  --------->TOE2(3)                                  <---------ZAT18     <-------TEIL   --------->TOE2(3)--------->AHL20(2)                      --------->ZAT18  <---------ANAC55(2)     <---------DAG2  <-----------GT1                    --------->ZAT14  --------->ANAC55(2)  <-----------GT1<---------AHL20(2)         <---------MYB59  <----------DOF2   tttcacgtacacagcaatgttacattaacctttttctaattttataactcttgtctagtcgtttgtacataactacaagtgcacctttattattttgtta  18755600  Previous    Next  AGI:  At3g50500.1    Description:  SPK-2-2 (SNF1-RELATED PROTEIN KINASE 2.2); kinase/ protein kinase. similar to SNRK2-3/SNRK2.3/SRK2I (SNF1-RELATED PROTEIN KINASE 2.3), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT5G66880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16565.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Plant protein serine/threonine kinase-like (InterPro:IPR015740) Range:  from: 18752571    to: 18755054    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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