Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->YAB1          <---------YAB1        --------->YAB1        <---------ICU4       --------->ICU4                                                                              --       <---------YAB1   <---------ICU4                                                             <-     --------->YAB1 --------->ANAC46                         --------->AHL20(2)                <----- ------->YAB1     <-----------GT1                           --------->AHL20(2)             <---------MYB52(1) -------YAB1<---------AHL20(1)           <-----------GT1    <---------AHL20(2)            --------->TOE2(3)   atgatagtcatcataatatttcacgataatgtcaatatagaatatacaatatttctaccaatataaattagaaaaacgagaatggacagaaacgttagga  18738400          <-----------TGA1          <-----------HVH21         --------->bZIP60(2)         --------->ANAC58         --------->ANAC46         --------->ANAC55(1)         --------->ANAC58         <---------O2         <---------TGA1a         --------->O2         --------->TGA1a      <---------ZAT14                                                        <----------DOF2      <---------ZAT18                                                <---------DAG2      --------->ZAT14                                        <---------ARR11(3)  --------------->AtSPL3                                     --------->ARR11(3) ------->GLK1(1)                                        <---------YAB1    <-----------GT1 --------GLK1(1)                                 --------->YAB1      <----------DOF2 -ZmHOX2a(1)                  ------->TEIL  <------ZmHOX2a(2)<-----------ARR10      <-------TEIL   gatttcagtacacgtcagtgattaatccaacgtatgtacaaattcgatcatttagaatatgattatcttccctttttttctttagtttcatatataactt  18738500                                                                                         <---------TOE2(3)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        --------->YAB1                      <---------TOE2(3)                                               <---------AHL20(2)                 --------->ATHB12                                                     --------->AHL20(2)                <---------YAB1                                                        <---------YAB1           <---------AHL20(2)                                                        --------->TOE2(3)          <---------AHL20(2)                                                       --------->AHL20(1)          --------->AHL20(2)                                                       --------->AHL20(2)          <---------AHL20(1)       --------->ZAT2    <---------AHL20(2)            <---------ARR11(3)          --------->AHL20(1)       <---------ZAT2    --------->AHL20(2)            <---------AHL20(1)         --------->AHL20(2)   <---------ZAT14      --------->TOE2(3)           --------->YAB1 <---------MYB52(2)  --------->YAB1--------->ZAT14 <----------DOF2          >>>>>>>>>>WRKY26   gaaacaaacaaattaattttcattgagaatgcttcactgctcgctcttctcttctttaatttcatagtcacaacaagttgatcaaaatattaatatttaa  18738600                                                         --------->YAB1                                                      --------->YAB1               <------------CBF              --------->AHL20(2)       <---------AHL20(2)                    <---------AHL20(2)      --------->AHL20(2)                   --------->TOE2(3)   --------->ICU4                    <----------DOF2  <---------ICU4          --------->WOX13(1)   <---------AHL20(2)                <---------DAG2--------->TOE2(3)        ------------>CBF   --------->AHL20(2)       <-----------GT1<----------DOF2          ----------->GT1   cagaaaaaattaatccacattgagactatttctctactcctttttctttaattccataatcacaacaagttggaaaaaatcaatccaaataagtgttttt  18738700                                                        ---------->DOF2                          ----                --------->YAB1             <---------TOE1(2)          <---------ATHB12          -----           --------->AHL20(2)              --------->SPL7      <------------CBF                 -----           ------------>CBF--------->YAB1------->PIF5--------->At4g35610                 --------->ANAC55(2)      ------------>CBF<-------TEIL       <-------PIF5<---------At4g35610      <----------DOF2 ------- ---------->DOF2<------------CBF    -------->P <------ZmHOX2a(2)  ------------>CBF    <---------AHL20(2)   gtcaaaagaccaattcaatattgattcattcatatactaacctcgtgcgatcgagagctaaagctaattgcaataaatctctttgtaatttaagtaatcc  18738800                                                                                    --------->AtLEC2                                                                                ------>NtERF2                                                                            <---------O2                                                                            --------->O2                                               <---------At4g35610          --------->ANAC46                                             <---------DEAR3(1)         ------>ZmHOX2a(1) -->ZmHOX2a(1)                            <-------PIF5                  <-----------HVH21 ---->TOE1(3)                             ------->PIF5                 --------->TOE1(3)       ------ ---->TOE2(3)                          <-----------RAV1(2)          --------->ARR14(2)   ---------->DOF2 -->ICU4                        <---------GLK1(2)                   <---------ARR14(2) ---------->DOF2   ttaaaaaaaaactatacaaaatgcctcttaccgagattatcgcaggggctgctcttggacttgctctccaaatccttcacgaggccatccaaagagcaaa  18738900            ------->GAMYB       ------>ZmHOX2a(1)      --------->TOE1(3)      --------->TOE2(3)                                                   <---------AtMYB61     ------>ZmHOX2a(2)                                           <---------ATHB12    <------ZmHOX2a(2)                                        --------->ZAT14   --------->ARR11(3)                                        <---------ZAT14   <---------GLK1(2)                                       --------->ANAC46                         -   <---------ARR14(2)   <---------ANAC46                   --------->ANAC58      ---------->DOF2-----   --------->ARR14(2) ------->TEIL                      <------ZmHOX2a(2) <---------TOE2(3)     -----   <---------ARR11(3) --------->ARR11(3)              <------ZmHOX2a(1)   <---------TOE1(3)---------- ----------->ARR10   <---------CCA1(2)          --------->YAB1   ----------->HVH21--------->DAG2<---- ---->DOF2 --------->MYB46(3)             <-----------GT1  --------->ANAC58  <---------------------WRI1   agatagatccttaaccacaagttgtatcttggaccgtctcgattctacaatcttgaggatcactccactgatggctaaggtcgaaaagctcaacaaagaa  18739000                                             <---------HSFB2a(2)                                             --------->HSFB2a(2)                                           --------->HSFB2a(2)                                     --------->ARR11(3)                              ------>ZmHOX2a(2)                            <---------ARR14(3)              <---------ANAC58    --------->GLK1(1)                            --------->ARR11(3)              <---------ANAC58    --------->At4g35610                            <---------ARR11(3)            <---------ARR14(2)    <---------At4g35610                            <---------AGP1 <---------HSFB2a(2)  --------->HSFB2a(2)                            --------->ARR14(3)          <---------MYB46(3)      <---------ZAT2     ------->TEIL           --------->ARR14(2)        --------->LBD16           --------->ZAT2 -------->At4g35610         <---------ARR14(2)       <---------ANAC58        --------->LBD16 ---->GLK1(2) =======================HOX2a_HOX2a     <---------ANAC46<---------HSFC1(2) ---->ARR14(2)<------ZmHOX2a(1)      <---------ARR11(3)--------->ALFIN1    <---------LBD16         <- >DOF2      <---------TOE2(3)<------ZmHOX2a(2)       <---------ANAC58--------->HSFC1(2)            <- -----ARR14(2)======================HOX2a_HOX2a ---------->DOF2 <---------HSFB2a(2)                <-   tccgatgaatctctgaggaaagtcttcgaagatcttaaacatcttctcgagaaagccgtggttcttgtcgaagcttatgcggagctcaaacgcagaaact  18739100                                                        --------->ATHB12                                                       --------->ICU4                                                       <---------YAB1                           <---------AtMYB61         <---------ICU4                        <----------DOF2              --------->YAB1           <---------TOE2(3)                <-------TEIL<---------ICU4                              <  ----------->GT1    ------->TEIL----------->GT1    <---------ATHB51         --------->CCA1(2)      < --------ANAC46      --------->GLK1(2) --------->AHL20(2)              --------->TOE2(3)            < --------ANAC58     <---------CCA1(2)  <---------AHL20(2)   <---------AHL20(2)<-------TEIL          - --------ANAC58 ----------->GT1  <---------ANAC46   --------->ICU4 <---------AHL20(2)             <--   tacttggaaaatataggtttgtgaatcttttggtctcgtatatatatacatgaaataatgattttttttttaatcttagatacatgaatacttctacata  18739200                                                                                          <---------ZAT14                                                                                          --------->ZAT14           ----------->RAV1(1)                                                            --------->ZAT18      ------>ZmHOX2a(2)                      <---------YAB1                          <---------ZAT14     <---------GLK1(1)                       <---------ATHB12                  <---------ANAC55(2)    <---------ARR11(3)                      ------>MYB46(1)                  --------->AHL20(2) ---------ANAC58               <---------AHL20(2)                        <---------AHL20(2) ---------ANAC55(2)           <---------ATHB12                           --------->AHL20(2)     <---- ---------ANAC58--------->AHL20(2)          ------>MYB83          ------->TEIL --------->ANAC55(2) -------->ANAC55(2)         --------->WOX13(1)--------->YAB1 <---------ANAC46<-----------GT1  <------ ---------GT1 --------->TOE2(3)--------->AHL20(2) <---------AHL20(2)  ------->TEIL   ---------->DOF2   ttacttgatctcccaacattatatagacaccaattaaacaaaaacctatcatttttttttgtttcatgtatgtatttaattacatactaaagtgtactgt  18739300  Previous    Next  AGI:  At3g50460.1    Description:  HR2 (HOMOLOG OF RPW8 2). similar to HR3 (HOMOLOG OF RPW8 3) [Arabidopsis thaliana] (TAIR:AT3G50470.1); similar to HR2 [Arabidopsis lyrata] (GB:AAP45324.1); contains InterPro domain Disease resistance, plant (InterPro:IPR014011); contains InterPro domain Mildew-resistance, broad-spectrum (InterPro:IPR008808) Range:  from: 18738821    to: 18739630    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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