Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->MYB46(3)     --------->YAB1                                                            <----------DOF2    <---------ATHB12                               <---------ANAC58       <---------HSFB2a(1)  --------->WOX13(1)                               <---------ANAC58       --------->HSFC1(2) ------ZmHOX2a(2)        --------->ANAC46        ------->TEIL             <---------HSFC1(2) ------YAB1   --------->WOX13(1)        --------->ATHB12                  --------->HSFB2a(1) --->YAB1   <---------ATHB12      ----------->RAV1(1)     <------ZmHOX2a(2)<----------DOF2   --------   cgatcaatcaacaaatcaatcccattcacacagtagcaacattgatttaagtaccttgggatcaatagaagatagaactttctttatctcattagcaaca  18711100                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                               >>>>>>>>>MYB98                                                                              --------->MYB52(1)                                                                   <---------YAB1                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                     --------->SPL7             --------->GLK1(2)          ------->TEIL                          --------->ZAT2                       <---------GLK1(2)--------->ANAC58   <---------ANAC55(2)    <---------At4g35610                  <---------ARR14(2)------->GAMYB   --------->ANAC55(2)<---------HSFB2a(2)                  ------->GAMYB   --------->TOE2(3)     ---- --->RAV1(1)          --------->HSFB2a(2)               --------->MYB52(1) --------->TOE1(3)  <------   gtatcacttgatgctcgcttccttctcgagcttccttcgtccgtccctctaaaaaaaacaacgcagaatctgataaaccctaacggaacaatggacttca  18711200                                                                                           --------->ANAC58                                                                                         ------>MYB46(1)                                                                                         --------->MYB52(1)                                                                                         ------>MYB83                                                                                   --------->WRKY12                                                                                   --------->WRKY38(1)                                                                                   ----------->HVH21                                                                                 --------->ZAT2                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                                 <---------ZAT2                                   ----------->HVH21                            <-----------ARR10                                 --------->ZAT2                                 --------->ARR14(2)                                 --------->At4g35610                           <------NtERF2                                 <---------ZAT2                              --------->DEAR3(1) -----                                 <---------At4g35610                  <---------AHL20(2)--------->MYB55(1)                                ------>MYB83                         <---------AHL20(2)--------->MYB46(3)                              <---------MYB59                        --------->AHL20(2)<---------MYB59 ----->ANAC46              <-----------GT1                  <---------ARR14(2)--------->LBD16  ------ ---ZAT14        --------->YAB1 ------>MYB46(1)         --------->LBD16     <---------LBD16--------->ANAC58   caaaacaacaattgagcaatgggaataagttacctagctgacaatttgacattgacaccgcgaatttcgaatttaatcgccggagctgaccaaacggaaa  18711300                                                                  <---------ZAT2                    --------->At5g28300                           <---------At4g35610               <---------ETT(2)                                   --------->At4g35610           -----               --------->ETT(2)                          --------->At4g35610                   ------   --------->MYB46(3)                                    <---------At4g35610                  <------ --------->MYB52(1)----------->GT1                     --------->DAG2     --------->HSFC1(2) -------- ---->DAG2     <---------WRKY38(1)             <-------TEIL       --------->ZAT2            <-------- ---->DOF2<---------WOX13(1)       ----------->GT1    ---------->DOF2     <---------HSFC1(2)<--------   agctaacaactaattggtcgacagtaaatttctcaaattgaaaattcgattcatcgaaaagctgattaagctgagaaacatcgaatcgaaaactccgtaa  18711400  <---------YAB1                                                                                 <--- ---->DAG2                                 <-------TEIL                                  --------->ANAC58 ---->DOF2                            <-----------RAV1(2)                                --------->ANAC58 ---MYB52(1)                         <------ZmHOX2a(2)              <---------------AtSPL8       <--- ->LBD16           --------->TOE1(3)<---------ARR11(3)          --------->MYB52(1)    <---------SPL7 -ANAC55(2)        --------->TOE2(3)<---------ARR14(2)  --------->DAG2             --------->LBD16 -ANAC46       --------->ZAT14      --------->ARR11(3) ---------->DOF2             <-----------HVH21   agtgatgagagtatcagtaaaccctaattcgacttgaagatcaggttcatcgcgagaaaaagggagtaacagagtacgaagtctccgtcgaacccaattg  18711500                                 <---------WOX13(1)                                        ==========          --------->AtLEC2      <------------CBF                                           ----------      <-----------HVH21        --------->ATHB12                                         <------ZmHOX2a(1)     --------->ANAC58         <---------YAB1       ------>NtERF2                       <----------ID1     --------->ANAC58     <-------GAMYB       <---------ARR14(2)                --------->ANAC58     --------->bZIP60(2) <---------MYB46(3)   --------->ARR11(1)                --------------------- ------ANAC58            --------->MYB52(2)<---------TOE1(2)                    --------->ANAC58 ------ANAC58        <---------ZAT6      --------->TOE1(2)<-----------GT1     ---------->DOF2       <   cgaaggaacgtcatgcgaatttagtgtttgttgtgattgaaatcgaacgattcggccattaaacgagttgataagagcgggaaagcaagaggacaaagac  18711600                              <-----------HVH21                            <-------MYC3                            ------->MYC2                            <-------MYC2                            <-------MYC4                            ------->MYC3                            -------->ABF1                            ------->MYC4                           --------->ANAC55(2)                 <---------DAG2                 --------->TOE2(3)             --------->At5g28300                                <--     --------->LBD16       <---------ANAC55(2) --------->DOF5.7(2)                              <----    <---------ANAC46       =========================bZIP_bZIP                              <---------At4g35610   <---------LBD16         <--------ABF1  <---------TGA1a                                  --------->At4g35610  --------->MYB52(1)       <---------TGA1a<---------ANAC58                             <---------ANAC58 ----------->HVH21         --------->O2   --------->TGA1a                              <---------ANAC55(2) ====================================bZIP_DOF <---------DEAR3(2)                       --------->ANAC55(2) >DOF2     --------->ANAC58<---------O2   <---------O2   <---------REM1(1)             <---------ANAC58 --->ANAC81--------->ANAC58--------->TGA1a--------->O2 --------->At4g35610        ----------->GT1<--- -----------HVH21--------->TOE1(3)        <---------ANAC58         <---------ANAC46  <-----------GT1   gaagtcacggagaacgaaaccttatggacacgtgtcagtctcttacgtcggtaactcagttgtagacttgtgtaggcgatgaagaagttacttatctgcc  18711700                                                                               --------->At5g28300                                                          ----------->GT1      --------->DOF5.7(2)                                                        ---------->DOF2       <---------DEAR3(2)                                             ----------->GT1                  ----------->GT1                                           <------------CBF              <---------TOE2(3)          <---------MYB52(2)             --------->ARR11(3)             --------->MYB52(1)         --------->STY1(2)               <---------ARR11(3)        <---------AHL20(2)       ------>ZmHOX2a(1)                 --------->ARR14(2)        --------->AHL20(2) -------MYB52(1)                         <---------ARR14(2)        --------->AHL20(1) -----ANAC46--------->MYB52(1) <-----------TBP    ---------->DOF2 --------->AHL20(2) ------RAP2.6(3)     --------->MYB52(1) <------ZmHOX2a(1) <----------ID1<---------DOF5.7(2)    ------   gttttcttcctagctaacgagactacctgtagtttttgtagaggatattgtcaaaagaaaaagaaaaaaaaaattaacgtcggtaacttaatttgaactt  18711800                                                                      --------->ICU4                                 ------>ZmHOX2a(1)               --------->ANAC58                       <------ZmHOX2a(1)                         --------->ANAC46                     --------->MYB59         <---------YAB1      --------->ANAC58              <----- --->ICU4        <---------MYB46(3)    <---------YAB1   --------->TOE2(3)                    --------   attagatgagtatgttttttggttaggacatactcctacttatgtttatgtttcttaacttcaattccagcaatgttttagtttctgtttcagtattgta  18711900                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         <----------DOF2                     --------->MYB46(3)                   --------->ARR14(2)                   <---------ARR14(2)<---------ANAC46                         --------->AHL20(2)                   <-----------GT1<----------DOF2              <---------AHL20(2)<---------AHL20(2) ----YAB1       <---------ZAT6  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ---------->DOF2          ----- ->YAB1    --------->TOE2(3)<---------MYB46(3) <----------DOF2 --------->AHL20(2)--------->AHL20(2)--   atagctctagttgccttagagtaaccactttggttacttttgtggatgtctttagatacccatttttaaatataaaagaataaaaaaataagagagagaa  18712000  Previous    Next  AGI:  At3g50380.1    Description:  similar to hypothetical protein OsI_037699 [Oryza sativa (indica cultivar-group)] (GB:EAY83740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40665.1); similar to hypothetical protein OsJ_035288 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21079.1); contains InterPro domain Vacuolar protein sorting-associated protein; (InterPro:IPR009543) Range:  from: 18697424    to: 18711514    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version