Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ARR14(2) ------->ARR14(2) ->LBD16              <---------YAB1                             --------->ANAC55(2) >ANAC58              --------->ICU4                            --------------->AtSPL8--------->ATHB12 >ANAC46            --------->YAB1                      <-------TEIL                  <---------ICU4 >ANAC58           --------->ICU4 <---------GLK1(1)   --------->ARR14(2)             <---------YAB1 - >DEAR3(1)   <---------YAB1       --------->GLK1(1)   <---------GLK1(2)              --------->ICU4<- -ALFIN1 <---------WOX13(1)   <---------WOX13(1)      <---------ARR14(2)  <-----------GT1         >>>   ataacctccagattgattatactgatgatgagattgatatccataagacttattcagattcacagacgcgtacttgtttccatctccatgattagccatt  18694900                                                       <---------GLK1(2)                                                    ------>ZmHOX2a(2)                                                   --------->CCA1(2)                                                   <------ZmHOX2a(2)                               --                                                  --------->ARR14(2)                              <--           <-----------HVH21                      <---------AGP1                                 ----          <---------DEAR3(2)                      <---------ARR11(3)                             ----         --------->DEAR3(1)            --------->TOE2(3)                                         <---       ------>NtERF2         --------->ANAC46     --------->ARR11(3)                             ----       --------->LBD16       --------->ANAC58     --------->AGP1                                 <---    <---------ATERF1(1)      --------->ANAC58     <---------ARR14(2)                             <--- -------->ANAC46          <---------ALFIN1       <---------CCA1(2)                              <---- --------LBD16          --------->ANAC46        ----------->ARR10                    <---------ZAT14 >>>>>>>E2Fb         --------->KAN4(2) --------->TOE1(3)                             --------->ZAT14   tcccgcttccgccggtcactgaacatccccaacgcatcaaaccttaaacctagatctgattcttctcccagtcaaatttgttcgcagtgtattgcctcag  18695000        ----------->TGA1        ----------->HVH21 ---->ZmHOX2a(2)                                    --------->LBD16 ----ZmHOX2a(2)                                    ----------->RAV1(2) ----->ARR11(3)                               <---------HSFB2a(1)                            <-------TEIL ----->AGP1                                   --------->HSFB2a(1)                           --------- ------AGP1                                  --------->GLK1(2)                             <---------ARR14(2) ----->ARR14(2)                              <-----------ARR10                  <---------ATHB12   -- ------ARR11(3)                              --------->ARR14(2)          --------->AHL20(2)--------->ARR14(2) ------ARR14(2)                     --------->WOX13(1)    --------->YAB1 <---------AHL20(2)<---------GLK1(2) -----CCA1(2)               ----------->GT1 <---------GLK1(2)   <----------ID1--------->WOX13(1) <---   atctactagagtgacgaattgatcaaaaactggaaaatcaatccaagaatctcccctgaatcaaaaacaccaaaattaaacaatcaattctcagattcga  18695100                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                          <----------DOF2 --------->MYB52(1)                                                                 <---------ANAC46   <---------ZAT2                      --------->MYB52(1)                         <---------ANAC58   --------->At4g35610 >ARR14(1)--------->TOE2(2)        --------->ANAC55(2)           <---------ANAC58   <---------At4g35610 ------->TOE2(3)    --------->MYB46(3)                     <---------TOE2(3)        --------->ZAT2--- ---ZmHOX2a(2)      <---------MYB52(2)   ----------->GT1   <---------TOE1(3) --------->AHL20(2)<-----   tccttgataaaaccagcgtcgaacaaacgcagagcttaagtgatggaaaaatcgacgagttagggtttcgttttcgcttttaaatcagctcgaaacggcg  18695200                                    <---------ANAC58                                 <---------MYB46(3)                                 <---------DEAR3(1)                                --------->ALFIN1                              <---------MYB46(3)                 <---------ZAT14                              --------->MYB55(2)                 --------->ZAT18                             <---------DEAR3(1)               ================================bZIP_DOF                             --------->ALFIN1                 <---------ANAC58                             <---------AtMYB61                <---------ANAC46                            <---------ABI4(1)                 <---------ANAC58                            <------NtERF2                     --------->TGA1a                            <-------GAMYB                     <---------TGA1a                            ============================================MYC_MYB                           <---------MYB46(3)               <---------DOF5.7(2)                          --------->ALFIN1               <------NtERF2       --------->At4g35610                       --------->ANAC46                 <---------MYB46(3)   <---------At4g35610         --------->ANAC58 <---------DREB2C(2)     ------>NtERF2--------->TOE1(2)         --------->ANAC58 <---------DEAR3(1)     ----------->HVH21 --------->At4g35610        --------->ZAT18<---------DEAR3(1)--------->YAB1 ------>NtERF2   --------->bZIP60(1)  <------ZmHOX2a(1)   --------->SPL7<---------ANAC58 <---------MYB46(3) <---------bZIP60(1) ----->ALFIN1         ------>MYB46(1)   <---------YAB1 <---------DEAR3(1)<-----------HVH21          - ----ANAC58           ------>MYB83  <---------ANAC46 <---------DEAR3(2) --------->TGA2(1)           - ----ANAC46         --------->TOE2(2)<---------SPL7 <---------DEAR3(1)  <---------TGA2(1)        ---- ------>REM1(2)  <-----------GT1<---------ANAC46 --------->DEAR3(1)<---------At4g35610           ---- ----ANAC58<------NtERF2 <---------ABI4(1)--------->ARR11(3)--------->MYB52(1)     ---------->DOF2  <   tgtaggaaggggcgcaaaattacctacggcggtggtgggcgtatgatatcgacgacggtggctaacgtgcgctgatgtcagacgacgaagcgcgagggaa  18695300       ----------->GT1   ------>MYB46(1)       <------NtERF2    <---------ALFIN1      --------->HSFB2a(2)-------->P      <---------HSFB2a(2)------>MYB83             <------NtERF2     <---------LBD16 --------------->AtSPL3       <---------------------WRI1 -------->ARR14(2) --------->ANAC58             <---------ANAC46 ------>TEIL---------->DOF2*TSS                 --------->ETT(1) ----->ANAC58      --------->ANAC58           <-----------HVH21           --------->AHL20(2) ----->ANAC58    ---------->DOF2             <-----------RAV1(1)        --------->AHL20(2) ---------ARR14(2)<---------GLK1(1)        <----------DOF2  --------->AtMYB61       -----------------   cgaatcgtcgggaaaaaaggaaagccctacccctactcactgcctctttgtcggagataaaaccaaaacaaaaaaaaaatatacaaattcaaaaaaaaaa  18695400               --------->ANAC58                                                    <---------ICU4               --------->ANAC58                                              <---------CCA1(2)               <---------TGA1a                                             <---------ICU4               ========================================bZIP_DOF            --------->YAB1      --------->At4g35610                                             <---------ATHB12    --------->DAG2                                                  --------->WOX13(1)<-----------GT1   ======================bZIP_DOF           <----------DOF2    --------->LBD16   <----------DOF2   ---------->DOF2                     <-----------GT1     -------->ZAP1  <---------ATHB12    <------ ------->ANAC81--------->TGA1a<------ZmHOX2a(1)          <-----------GT1--------->WOX13(1)   <-------   aaaaaaaaagctgaggcacgagagataaaccaggacaagttttactctttttatgtttttgaccccgtattaatcaatcatctctttattaccccataat  18695500                                                 <---------YAB1                                               <---------ICU4                                               <--------HAHB4                                              --------->ICU4                                            <---------------AGL15                                <---                                            --------------->AGL15                                <---                                  --------->ANAC58                                      --------->CCA1(2)                                  --------->ANAC58                                     <---------ARR11(3)                  <---------ZAT14 --------->ANAC46                                     --------->ARR11(3) ---ICU4          --------->ZAT14 <---------ANAC55(2)                                  --------->AHL20(1) --ATHB12<-------TEIL    <----------DOF2<----------DOF2   ----------->GT1          ---------->DOF2   tctcaatttgatacatatagtactctgctttcaattacgctactttcgattattagaaacatgtaaaacttcgaaattagaaacaaaaagatattagttt  18695600                                                     <---------YAB1                                                  <---------MYB46(3)                                                 <--------P                                             <---------LBD16                                      <---------ARR14(2)   --------->GLK1(1)     --------->AHL20(2)               --------->ARR14(2)   <---------GLK1(1)     --------->YAB1                   --------->ZAT14--------->ICU4 <---------YAB1                   --------->ZAT6<-------GAMYB         ------->TEIL ------ANAC58                --------->TOE2(3)  <---------MYB52(1)   <---------CCA1(2)         <----- ------ANAC58                --------->TOE1(3) --------->LBD16  ------>ZmHOX2a(1)             -------   cttacaattaaaacaaaaatacaaaataaaaccctaaccctatactctccggttgatgatgaaatcctcgtgaatctctagtctatactcgtccattgat  18695700                                                                                           <------NtERF2                                                                                          ------>NtERF2                                                                                          <---------RAP2.3(1)                                                                                         <---------RRTF1(3)                     ------>ZmHOX2a(1)                                                   <---------RAP2.3(3)                     ==================HOX2a_HOX2a    <---------DAG2                     <---------RAP2.6(2)             --------->ANAC55(2)                      <----------DOF2                    <---------RAP2.3(2)            --------->SPL7                        --------->ZAT14                        <---------DEAR3(1)            <---------TOE1(2)                  --------->MYB52(2)      <---------DAG2   --------->RAP2.6(3)      --------->TOE1(2)                      <---------MYB52(1)        <----------DOF2 --------->MYB52(1)      --------->TOE2(3)                     <-------GAMYB  <----------DOF2        <---------YAB1      --------->TOE2(2)         ------>ZmHOX2a(2) <---------ZAT14  --------->ARR14(2) ----------->TGA1 ----TOE2(3)<---------TOE2(2) --------->ARR11(3)  --------->ZAT18  <---------ARR14(2) <---------ATHB12 -->YAB1  <---------SPL7      <---------ARR11(3)  <---------ZAT18 <------ZmHOX2a(1)   ----------->HVH21   gatgtaaaccttcgtacgtagtcctcgtgaatgatctcttctcttccgttagtgaacttttctttggaggatacttttccagtgatcaatgacggcgtta  18695800  Previous    Next  AGI:  At3g50370.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO71840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81687.1) Range:  from: 18687041    to: 18695327    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g50373.1    Description:  similar to DNA binding / protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT5G51360.1) Range:  from: 18695640    to: 18696102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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