Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                            <xxxxxxxx                                                                                           <xxxxxxxxx                                                                                           <---------LBD16                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                       <---------AHL20(2)xxxxxxxxxxxx                                                 --------->ARR11(3)   <---------AHL20(2)xxxxxxxxxxxxx           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->AHL20(1)-------->HAHB4    <---------ARR11(3)       --------->YAB1                       --------->AHL20(2)     <--------ATHB1    --------->ARR11(3)       --------->TOE2(3)                    <---------AHL20(2)     <--------HAHB4   --------->CCA1(1)     <---------TOE2(3)               -------->ATHB1                --------->YAB1   <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               --------->ATHB51 xxxxxxxxxxxxxxxxx ------->AHL20(1)                    --------->ATHB51             <---------YAB1    --------->RVE1(1) --------AHL20(1)     --------->YAB1 --------->ATHB12             <---------ATHB51  xxxxxxxxxxxxxxxxx --------AHL20(2)    <---------YAB1  <---------ICU4             --------->YAB1     xxxxxxxxxxxxxxxxxx ------->AHL20(2)  --------->YAB1   <---------ATHB51         ----------->GT1       xxxxxxxxxxxxxxxx>smallRNA(i) ----AHL20(2)--------->YAB1         --------->ICU4   ----------->GT1  --------->AHL20(2)xxxxxxxxxxxxx --->AHL20(2)--------->TOE2(3)  <---------YAB1  <---------AHL20(2)--------->ICU4   xxxxxxxxxxxxxxxxxx -->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AHL20(1)<---------ICU4  xxxxxxxxxxxxxxxxxx   ttttattaatgttaatcttatttatgatatgtttatgaattattgtttaaatattttgtaattttgtaataattaaatgttatcaaatatctctgcggtt  18645200         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->ATHB51      <---------YAB1     <---------AHL20(2)    --------->YAB1   <---------YAB1 <---------ICU4 ---------YAB1 -------->ICU4 xxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxx>smallRNA(s2) xxxxxxxxxx>smallRNA(le3) xxxx>smallRNA(s) xxxxxxxxxxx>smallRNA(le3)                                                      <---------AHL20(1) xx>smallRNA(i)                                                                 --------->ARR11(3) xxxxxxxx>smallRNA(i2)                                                          --------->AHL20(1) x>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------YAB1               <---------AHL20(2) xxxx>smallRNA(i)                               --------->YAB1              <---------AHL20(2) xxx>smallRNA(i)                               <---------YAB1          --------->ARR11(3) xxxxxx>smallRNA(i2)                           ----------->GT1         <---------ARR11(3) xxxxx>smallRNA(i2)                  --------->ARR11(3)               --------->YAB1 xxxxx>smallRNA(fl3)                 --------->AHL20(1)           <---------AHL20(2) xxxxxxxxx>smallRNA(s2)              <---------ARR11(3)          <---------AHL20(2) xxxxx>smallRNA(se3)         ----------->GT1 --------->YAB1      --------->AHL20(2) <---------HSFB2a(2) xx>smallRNA(fl3)<---------YAB1      <---------AHL20(1)    ----------->GT1 --------->AHL20(2)  <-----   tgatgattataattgaattgttatagtcatggagaaaaatatatcaaaaatgataattttgtagtaaataaatgatattaaatattttggaagttttatt  18645300                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                         <---------AHL20(2)                                    <------ZmHOX2a(1)                  <---------RVE1(1)                                  <---------TOE2(3)                    <---------CCA1(1)                                  <---------TOE1(3)                   <---------ARR11(3)              ----------->GT1 --------->CCA1(2)                       --------->ARR11(3) <xxxxxxxxxxx            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->AHL20(2)     --------->ICU4        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <---------AHL20(2)  <---------YAB1    <---------MYB52(2)        <----------DOF2           --------->AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <-----------GT1     --------->ALFIN1    ----------->GT1  --------->AHL20(2)<-----------GT1      --- ----YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)      <-----------HVH21   <---------GLK1(2)--------->YAB1   ttagtaactaatcgtgtagttaatgtggagagatttaaggaagattgttaaatgtcaaatatttaattcgaagattttttttctaattatcaaaaacaaa  18645400                                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                   <-----------GT1                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                              <---------AHL20(2)                                             --------->AHL20(2)                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                             <---------AHL20(2)                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)xxxxxxxxxxxxxxxxxx>smallRNA(si3)           --------->YAB1        ------>ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------ZAT6 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <------NtERF2 <---------AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(i) --------->AHL20(2) ----------->GT1      <---------YAB1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ---- xxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <---------YAB1 ------>TOE2(3) <---------YAB1  <---------MYB59xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   --------->YAB1 <   cattaaaatccagtgatagttattgtaaataagtcctaactatatgatttatttcacaaaatggctgcaaaaatttcaagtttccaactataattcgaag  18645500                                --------->REM1(1)                               ------>MYB83                --------->HSFB2a(1)                <---------HSFC1(2)           --------->HSFB2a(2) ------>MYB46(1)        <----------DOF2        -------->P      ------->TEIL      ------>ZmHOX2a(1) <---------AtLEC2 <-----------GT1 ----->RAP2.6(3)--------->HSFC1(2)                        *TSS                          --------->ANAC58 ------NtERF2   <---------HSFB2a(1) ------->GAMYB  <----------DOF2                      --------->ANAC58   tcggcatggacttttggaattttctcctctacctacaactgcaacctcggtctctttctctcttcacatatataagagagtcccttgatcaagaaaccag  18645600                                                                        <------NtERF2                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                      <---------DEAR3(1)                                                                      --------->ANAC46                                                               <------NtERF2                                                              ------>NtERF2                                                              <---------RAP2.6(3)                                                             --------->ANAC58                                                             >>>>>>>>>AtERF-5                                                             --------->ANAC46                                                             --------->ANAC58                                                             >>>>>>>>>AtERF-3                                                             >>>>>>>>>AtERF-4                                                             --------->ATERF1(2)                                                             >>>>>>>>>AtERF-7                   -----                                                             --------->RAP2.3(3)              <------                                                             --------->RRTF1(2)               <------                                                             --------->DREB2C(2)              =======                                                             >>>>>>>>>AtERF-2                 <------                                                             --------->RAP2.3(2)              <------                                                             --------->RAP2.6(2)              <------                                                             >>>>>>>>>AtERF-1                 -------                                                             --------->DEAR3(1)               <------                                                             --------->RRTF1(3)               -------                                                            --------->MYB46(3)                =======                                                            --------->RRTF1(1)                >>>>>>>                                                            --------->ERF1                    <------                                                            --------->RAP2.3(1)               -------                                                            --------->DEAR3(2)              <--------                                                            --------->ATERF1(1)       ---------->DOF2                                                           <---------ATERF1(1)        ===============                                                           <---------ZAT2          --------->At5g28300                                <---------LBD16            --------->ZAT2  <------NtERF2   ----------                    ---------->DOF2 ---------->DOF2       --------->ANAC46--------->LBD16<---------At4g35610           --------->YAB1     ------>ZmHOX2a(1)         <---------ANAC58--------->ATERF1(1)----------      --------->LBD16      ------>ZmHOX2a(1)            <---------ANAC58<---------LBD16  --------->At4g35610   ataatttccccaaacacaattctaaagtcctcctctcggaaagtaagagactcaacttccgagccgccatggacgccggagtagcagtaaaagctgacgt  18645700                                                                          --------->HSFB2a(2)     --------->ICU4                                                       <---------HSFB2a(2)   --------->YAB1                                                      --------->CCA1(2) ---->ALFIN1                                                           --------->GLK1(2) ---TGA1a                                                             <---------ARR14(2) ---O2                                                                --------->ARR11(1) ===========================bZIP_DOF                                  --------->ARR14(2) ---ANAC58                                                           <---------HSFB2a(1) ---bZIP60(1)                                                        --------->GLK1(1) ---bZIP60(2)                                                        <---------GLK1(1) -->O2                                                               --------->HSFB2a(1) ---ANAC46                                                          ----------->ARR10 -->bZIP60(1)                                                     --------->LBD16 ===========================bZIP_DOF                             <---------ANAC58   ---------->DOF2 >>>AtbZIP1                                                      <---------ANAC46 ------>MYB83 ---ANAC58                                                      <---------LBD16 --------->MYB46(3) -->TGA1a                                                     <--------P<-------TEIL--------->MYB46(3) -TGA2(2)                           --------->YAB1           <---------ANAC58  --------->ANAC58 ===bZIP_DOF                ---------->DOF2                  <---------ANAC58  --------->ANAC58 ->HVH21                 --------->AtLEC2        --------->ALFIN1<---------ANAC58 ------>MYB46(1) ->TGA1          ---------->DOF2   <------ZmHOX2a(2)   <---------ARR14(2) <---------HSFC1(1)      <--   ggcagtcaaaatgaagagagaaagaccattcaaagggatcagaatgagaaaatgggggaaatgggttgcggagattcgagaacccaacaagcgttcaaga  18645800                                            --------->ANAC58                                            --------->ANAC46                                     ------->PIF4                                     <-------PIF5                                     <-------MYC3                                     ------->PIF5                                     <-------MYC2                                     <-------PIF4                                     ------->MYC3                                     ------->MYC2                                    <------NtERF2                                    <---------ANAC58                                    <---------ANAC58                                   --------->ABI4(2)                                   ------>NtERF2                                  <---------ANAC46                                 --------->ATERF1(1)                                 <------NtERF2                                ------>NtERF2                                <---------ATERF1(1)                                <---------RAP2.6(1)                                <---------DEAR4(2)                                <---------ERF1                                <---------RAP2.3(1)                                <---------ORA47(2)                                <---------DEAR3(2)                                <---------RRTF1(1)                               <---------ATERF1(2)                               <---------DEAR3(1)                               --------->ALFIN1                               --------->DEAR3(1)                               <---------RRTF1(3)                               --------->ATERF1(2)                               <---------RAP2.3(2)                                                <--                               <---------RAP2.3(3)                                                <--                               <---------RRTF1(2)                                                 <--                              <------NtERF2 ----------->HVH21                                     ---                              <---------ABI4(1)                                                   <--                              --------->ATERF1(1)                                                 ---                              --------->RAP2.3(1)                                                <---                             <---------RAP2.3(1)                           ------>MYB46(1)       ----                             <---------DEAR4(2)    --------->At4g35610    --------->MYB52(1)   ------                             <---------ATERF1(1) --------->ANAC58  --------->At4g35610        -------                            <---------DEAR3(1)   --------->ANAC58  <---------At4g35610        -------                      <---------HSFB2a(2)   --------->ANAC58     <-----------RAV1(2)--------->ANAC46                      --------->HSFB2a(2)  --------->SPL7   <-----------GT1------>MYB83      <-------                     <---------LBD16<---------ANAC46     <----------DOF2 --------->MYB46(3)  <-------     <---------DEAR3(1)--------->LBD16 <-------TEIL<---------At4g35610<------ZmHOX2a(1)      -------- --------DOF2 --------->ZAT6<---------RAP2.3(2)<---------ALFIN1--------->TOE2(3)  <XXXXXXXXXXXXXXXXXX   ctttggctcggctcttactctactcccgaagcggcggcgcgtgcatacgacacggctgtcttttacctcagaggaccaactgctacgctcaacttcccgg  18645900       --------->LBD16      <---------ANAC58      <---------ANAC58      <---------ANAC46      <---------ANAC55(1) --------->At4g35610 -------HSFC1(2)                                             <---------ZAT2                         - -------ZAT2                    --------->At4g35610          --------->ZAT2                         < -------HSFB2a(1)           <-----------HVH21               --------->ALFIN1                       <- ------>HSFB2a(1)        <---------GLK1(1)              --------->ATERF1(1)                      <--- -------At4g35610        --------->CCA1(2)              <------NtERF2                           ----- ------>HSFC1(2)        <---------ARR14(2)             ------>NtERF2<---------ZAT2              <---- ------ARR14(2)        <------ZmHOX2a(1)          --------->DAG2    --------->At4g35610         <---- ----->ARR14(2)     --------->LBD16     ------->GAMYB <---------DEAR3(1)                     <------- --->LBD16          ------>NtERF2  <------NtERF2 ---------->DOF2    <---------At4g35610     <------NtERF2 -->ANAC46         --------->DEAR3(1)  --------->MYB46(3)<---------ANAC46                   --------- -->LBD16        ------>NtERF2  <------NtERF2 <------ZmHOX2a(1)--------->ALFIN1            <---------ATERF1(1) --LBD16--------->ALFIN1--------->ARR14(2)<------ZmHOX2a(2) <---------AtMYB61              ------>NtERF2 --HSFB2a(2)     --------->LBD16<---------At4g35610--------->DAG2 <---------PCF2          ----------- ->HSFB2a(2)    --------->DEAR3(1)--------->RAP2.6(2) ----------->HVH21                   <---------DEAR3(1) XXMIR169G*------->TEIL==========================HOX2a_HOX2a<---------DEAR3(1)            --------->ETT(2)   agcttctgccgtgtacctccgccgaggatatgtcagcggcaacgatcaggaaaaaggcgacggaggtgggagctcaagtagatgcgataggggcgacggt  18646000                    ------>NtERF2                    --------->LBD16                   --------->DEAR3(1)                 <-------GAMYB                  <------NtERF2                     <---------MYB46(3)                  --------->ATERF1(1)               --------->LBD16                  --------->RAP2.3(1)               ------>NtERF2                  --------->DEAR4(2)               <---------ANAC46                 <---------ATERF1(1)              <------NtERF2                 --------->ABI4(1)                --------->ATERF1(1)                 ------>NtERF2                    <---------LBD16                 <---------RAP2.3(1)             ------>NtERF2                --------->ANAC46                 <---------RAP2.6(1)                --------->DEAR3(1)               <---------RRTF1(1)                <---------DEAR3(1)               <---------ATERF1(1)                --------->RAP2.3(3)              <---------DEAR4(2)                --------->RAP2.3(2)              <---------ORA47(2)                          --------               --------->RRTF1(1)                <---------RAP2.3(1)                        ---------             --------->ANAC58                    <---------ERF1 <---------ANAC58            ---------          ------->GAMYB <----------DOF2         <---------RRTF1(2)                         <---------LBD16         --------->MYB46(3)                     <---------DREB2C(2)                    ----------->HVH21         <---------MYB52(2)                     <---------ANAC46<---------ANAC58     ----------->RAV1(2)      <----------ID1<------NtERF2               <---------RRTF1(3)                   <--------------- -------->ZAT18--------->ERF1                   <---------RAP2.3(2)                  --------->At4g35610 ---------ZAT18--------->ORA47(2)               <---------ATERF1(2)                  ---------------- --------ANAC46--------->RAP2.3(1)              --------->ATERF1(2)                  <---------ANAC55(2) ------MYB46(3)--------->ATERF1(1)              <---------RAP2.6(2)                  <---------At4g35610 ---->ALFIN1 ------->GAMYB                      <---------RAP2.3(3)                  --------->ANAC55(2) -----DEAR3(1) --------->DEAR4(2)              <---------LBD16--------->ARR11(3)   <-----------GT1--- -----AtMYB61--------->ANAC46              <----------DOF2<---------YAB1        --------->ANAC58  --- --DEAR3(1)  --------->ANAC58        <---------ANAC58<------NtERF2              --------->ANAC58  <-- >ATERF1(1)--------->MYB52(1)        <---------ANAC58----------->GT1  <<<<<<<<<<WRKY63<---------MYB59 >HVH21  <---------MYB55(2)      ---------->DOF2<---------DEAR3(1) ----------------------->TaNAC69(2)   ggtgcagaacaacaaacgccgccgcgtttttagtcaaaagcgtgactttggcggcgggttattagagcttgttgacttgaacaagttacctgacccggaa  18646100  Previous    Next  AGI:  At3g50260.1    Description:  ATERF#011/CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ERF011 (ERF011) [Arabidopsis Thaliana] (GB:Q9SNE1); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G67190.1); similar to dehydration responsive element-binding protein 1 [Glycine soja] (GB:ABX58051.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 18645558    to: 18646380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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