Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------REM1(1)                             --------->ALFIN1                   <----------DOF2                  ------>ZmHOX2a(2)                 ========================HOX2a_HOX2a                --------->AGP1                <---------ARR14(2)                <---------ARR11(3)                             <-------TEIL                <---------AGP1                           --------->ANAC58                --------->ARR11(3)                       --------->ANAC58           ---------->ID1                --------->ARR14(2)                    ----------->TGA1              -----------------   --------->TOE2(3)       <---------ANAC46   <---------At4g35610           <---------ZAT18 --------WRKY38(1)=======================HOX2a_HOX2a  ----------->HVH21     --------->ZAT14 ------>WRKY18(1)<------ZmHOX2a(2)            --------->At4g35610           <---------ZAT14 ->TOE2(3)     <---------CCA1(2)  <------ZmHOX2a(1)--------->GLK1(2)--------->HSFB2a(2)   gtcaacctcattagtctagatctttgattcggtgtaggattagactggagcagactctgacgaaatacatccagacagtgcaatttgcccttatcgtcaa  18623900                                                    <---------WRKY38(1)                                          <---------WRKY45                                          <---------WRKY38(1)                                          <---------WRKY12                                         --------->WRKY18(1)                                         <<<<<<<<<<WRKY43                                         <<<<<<<<<<WRKY6                                  <---------bZIP60(1)                                         <<<<<<<<<<WRKY11                                 <---------ANAC46                                         <<<<<<<<<<WRKY26                                 --------->bZIP60(1)                                         <<<<<<<<<<WRKY38                          <-------GAMYB                                       <------MYB83 <---------WRKY12              ------>ZmHOX2a(2)               <---------ANAC58        <------MYB46(1)                           <------ZmHOX2a(2)               <---------ANAC58       <---------AtMYB61                         --------->ARR14(2)             <-----------GT1          <---------MYB46(3)             <---------ZAT18   <-----------RAV1(1)        --------->YAB1               <--------P     <---------WRKY45 --------->ZAT14<---------MYB52(1)        <--------ATHB1             <---------MYB46(3)<---------DOF5.7(2)        <---------ARR14(2)       <---------ATHB12           <---------AtMYB61--------->WRKY18(1)      --------->LBD16 <------NtERF2 >AGL1 --------->ICU4   <-------TEIL<-------GAMYB <--------ZAP1--------->AtLEC2 <---------ARR11(3)   gtatgtccaatgatttttcttgcccgttcatgagttttggttggtcaacttcggtcaacgtctccatgcagagctctccccagatcgttgtgtcgtcgtc  18624000                                         ------->GAMYB                                        <<<<<<<<<TAC1                                       ------>MYB83                                            ------                                       ------>MYB46(1)                                         ------                                      --------->MYB52(1)                                       ------                   ---------->ID1    ------->GAMYB                                            <------                   <---------CCA1(2)--------->MYB46(3)                                  --------->ANAC46               <---------ANAC58   <-----------GT1                                    ----------->HVH21               <---------ANAC58   <<<<<<<<<GT-1   <---------AtMYB61                 ------>ZmHOX2a(2)           ------>ZmHOX2a(2) <---------ARR11(3) <-----------RAV1(1)                 =================      <----------DOF2     <---------TOE2(3)     ------>ZmHOX2a(1)        <-----------HVH21  <--------     <---------ANAC58     <---------TOE1(3)   ----------->RAV1(2)       ------>ZmHOX2a(1)   ---------     <---------ANAC58    <-----------GT1<------------AtMYB77            ===================HOX2a_HOX2a   tctatgtgcttgatcgagcttgtctcttaacgatattaaccaactgtctcctgtggtctcttccgacctctctcctatcacctcgatctcacagaacacg  18624100          ----------->RAV1(2) --->ANAC46       <---------YAB1             <---------MYB52(1) --->ANAC58 ------>ZmHOX2a(1)               ----------->GT1 --->ANAC58 ----------->HVH21           <-----------HVH21 ---LBD16 <---------At4g35610        <---------LBD16            <---------ALFIN1 ==================HOX2a_HOX2a      <-----------------AGL1 ------->TEIL                 <---------RAP2.6(2) -ZAT14<---------At4g35610        <---------WRKY18(1)  --------------->AtSPL8          --------->RAP2.6(3) >ZAT14--------->At4g35610       ----------->HVH21    ------>ZmHOX2a(1)      ----------->GT1   gagcaagtctgctcctgactcttatagtcttggtcttgacccggtctggtaatttcctctgtacctccacatctctgaagagtcaatatttcggctaaac  18624200                                        <---------MYB46(3)                                        <------MYB83                       --------->ATHB12                                        <------MYB46(1)                 <------MYB83               --------->WRKY12     <-----------RAV1(1)                 <------MYB46(1)               ----------->HVH21    <---------MYB46(3)                 <---------AtMYB61               --------->WRKY38(1) <---------WOX13(1)                  <---------MYB46(3)             <----------DOF2      <---------ANAC58                    <--------P            ------>ZmHOX2a(2)     <---------ANAC58                   <---------ANAC58          --------->ARR11(3)     --------->ATHB12                    <---------ANAC58   --------->TOE1(3)          <---------ARR11(3) --------->MYB52(2)                     <---------MYB46(3)  --------->TOE2(3)  <---------TOE2(3)        <---------MYB52(1)       <----------DOF2 --------->ATHB12  ------->TEIL>>>   catggaggttttgatctttgactggttcggatagttgattgttggtgaacatgtctttgttgatgagaattggttggtcattggaatgaacattaactaa  18624300                <---------DAG2                <----------DOF2                <---------------AGL15        <-------GAMYB        <---------ANAC46       --------->MYB52(2)                           ----------->GT1       --------->MYB55(2)                          --------->ARR11(3)                    <---------ANAC58       <---------MYB46(3)                          <---------ARR11(3)                --------->At5g28300       <------MYB83                               <---------At4g35610          ---------->DOF2       <------MYB46(1)     <------------CBF --------->ICU4                    <---------AHL20(2)  <--      <---------AtMYB61 <------ZmHOX2a(1)  <------------CBF                  <---------AHL20(2)   ---   <-----------RAV1(1) --------->LBD16   <---------YAB1             --------->At5g28300  <---------ANAC58 >>>>>>>>>>>>>>LFY   <---------LBD16 <------------CBF              ----------->GT1  ----------->GT1   atccattgttggttgaagctttttcaggaaattgggagagattgtaattgtgagatgtttaatgcaacgctgtaactaatttaaagctgtaacttggcca  18624400                                                                                                 <---                                                                                                <----                   --------->YAB1                                                      --------->AHL20(2)                  <---------ATHB12                                        <---------ANAC46 <---------AHL20(2)                --------->WOX13(1)                                        <---------ANAC58--------->AHL20(1)     <---------ANAC58                                                <---------ICU4    <-----------TBP     <---------ANAC58                                               <---------YAB1   <----------DOF2 -----MYC3    ------------>CBF      ---------->DOF2      ---------->DOF2  <---------ANAC58<---------AHL20(1) ---->MYC3 <---------AHL20(2) <----------DOF2 ------>ZmHOX2a(1)   --------->YAB1     --------------->AGL15   tgtgtttgcttattttttcaatcaacaaaattcttttaaaaagacttcctactcttagataaagactctcataaatgcttgtagtttctttatatattta  18624500                                              <----------DOF2                                           <------ZmHOX2a(1)                             <-----------TBP                                       ---------->DOF2                      <---------AHL20(1)                                 --------->AHL20(2)                         --------->ARR11(3)       --------->GLK1(1)     --------->AHL20(2)                          <---------AHL20(2)       <---------GLK1(1)     --------->AHL20(1)                          --------->AHL20(2) ------TOE2(3)               <---------AHL20(2)--------------->AtSPL8    --------->YAB1 --------->ARR14(2) -------GT1     --------->AtLEC2 <---------AHL20(2)            --------->MYB46(3)       <---------ARR14(2)   acgaatgagatttcagtcatccaaactggaattaattaaaaaaaaggactttgtactcttatacaacgactctaattatatattcttgtggatttgtagt  18624600                                 <-----------GT1                                                -----                             --------->AHL20(2)                                                 -----                            --------->YAB1                      --------->AHL20(2)              <----                           --------->AHL20(2)                   <---------AHL20(2)             ------                       --------->AHL20(2)                  <-------TEIL         ---------->DOF2------   atattcaaatttcaacaagttgcaaaaaaataaaaatactatacaaactcttataccgaggtgcatttatatacactaaaacaaaagtcttaagaaaaaa  18624700     <---------ALFIN1                                 ------>ZmHOX2a(1)   ------>MYB83    ------>ZmHOX2a(2) <---------ANAC58         <----------DOF2            ------>MYB46(1) ---->GLK1(2)         <---------ANAC58         <---------DAG2            --------->MYB52(1) ---->ARR11(3)    <---------ANAC58         ==================HOX2a_HOX2a------->GAMYB -----ARR11(3)    <---------ANAC58         ------>ZmHOX2a(2)           --------->MYB46(3)----------->GT1 --->RVE1(1)     <---------At4g35610   ----------->ARR10             <-----------GT1 ---------->DOF2 --->CCA1(1)    <---------YAB1       <---------MYB52(1)         ---------->DOF2   --------->AtLEC2   tcttgatccacatttgttctgcttgcttcgttttagaccgtttgatccgctttctccttctgaatccaaagtaaccaactgttcatccaaagagataaat  18624800  Previous    Next  AGI:  At3g50200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59797.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) Range:  from: 18623445    to: 18624306    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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