Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ANAC55(2)     --------->ANAC58         <---------ANAC58     <---------At4g35610                                  --------->ANAC58         <---------ANAC58  <---------At5g28300                                     --------->ANAC58         --------->ANAC55(2)-------->ZAP1                                <---------AtLEC2        <-------TEIL      <---------WRKY18(1)                        <----------DOF2     <------MYB83         <-----------GT1                           <---------DAG2--------->SPL7     <------MYB46(1)   <---------ICU4                             ------->TEIL<---------------AtSPL8  <---------ANAC58  --------->YAB1                             <---------REM1(1)<---------SPL7  <---------AtLEC2 <---------YAB1--------->ANAC58              --------->ALFIN1<---------MYB46(3)  <---------ANAC58<---------ARR11(3)      ----------->HVH21   <---------------AtSPL3 ---------YAB1   --------->YAB1  --------->ANAC46             --------------->AtSPL8 ------RAV1(1)  --------->ICU4--------->At4g35610            <---------ANAC46 <---------------AtSPL3   ttgtgcttggtacgtgccatgatcatattgaccgctcgccatttgtgacgctccatgggtctgaggtgtacctttccatggtggtacggaccaatagaga  18608200                                                                   <-----------HVH21                                                          <-------TEIL   <---------ZAT2----------->GT1         --------->ANAC58                                --------->CCA1(2)          <---------ANAC58         --------->ANAC58                      <---------GLK1(1)<---------ANAC58    <---------ANAC58       <--------P       <---------ANAC58       --------->GLK1(1)<---------ANAC58    <---------ANAC46<    <---------TOE1(3)   <---------ANAC58 ---------->DOF2--------->ARR14(2)     <-----------RAV1(1) <-    <---------TOE2(3)  ---------->ID1 --------->CCA1(2) <---------ARR14(2)     <---------MYB46(3)  <-   cagtttgaggtaagtaagacttcttgtcgttctcttgaagatagaaaggaactctgtagatacagagcttgtcccagctatttgttgcgtcgtaactaag  18608300                                                                                         --------->ANAC58                                                                                         --------->bZIP60(2)                                                                                         --------->O2                                                                                         --------->ANAC55(2)                                                                                         --------->ANAC46                                                                                         --------->ANAC58                                                                                         --------->ANAC55(1)                                                                                       <---------ALFIN1                                                                                    --------->PCF2                                                                                    <---------TCP20                          <------ZmHOX2a(2)            <----------DOF2      ----------------------->TaNAC69(2)                         <---------ARR11(3)           <---------ANAC58     ------>ZmHOX2a(2)       <-                         --------->ARR11(3)           <---------ANAC58   <---------ARR11(3)       <-- ----------DOF2      ------>ZmHOX2a(2)  <---------ANAC58                 --------->ARR11(3)>>>>>>>>>NAP --------ANAC58 ------>ZmHOX2a(1)       <---------ANAC58       ====================================== --------ANAC58 =================HOX2a_HOX2a<---------CCA1(2)  <----------DOF2   <---------ZAT18 <---   tgctttctccatcttgtccttgatcgagatcacccattcttctcgtgtctctcttggcttttcttcttttacttcgatcttactgggctccacgtaagtc  18608400     ===================================MYC_MYB     <-------GAMYB    <---------MYB46(3)   --------->ALFIN1  <-------MYC4  <-------MYC2  <-------MYC3  <-------PIF5  ------->MYC3  ------->PIF5  ------->MYC4  ------->MYC2 --------->PIF3(3)                  <---------MYB52(1) <---------PIF3(3)                 ----------->GT1                                            <------ ============MYC_MYB          --------->ANAC55(2)                                             ------- <---------TGA1a              <---------TGA1a                                                <------- --------->O2                 <---------ANAC55(2)                                       <----------DOF2 --------->ANAC46             --------->TGA1a                      ------->TEIL        <---------DAG2 --------->TGA1a              --------->O2                      <---------MYB52(2)     -------------- <---------O2                 <---------O2                      --------->ANAC58      <-------------- --------ALFIN1            <------ZmHOX2a(2)              <---------WOX13(1)         ------->TEIL -------REM1(2)           <---------ARR11(3)             --------->ARR14(2)   ------->GAMYB<--------- ==========bZIP_DOF  <---------ANAC46                    <---------ARR14(2)  --------->MYB46(3)  ---- --------------PIF3(1)    --------->ARR11(3) --------->AtLEC2   --------->ANAC58  <---------DEAR3(2)   tccacgtggttgtgcaagttttggcctagatcacgtctggtaatttcatggaaactgtggattggcacgaaccatgacaaccgtctgtaccttttgtggg  18608500                                                                                                 <---                                                                                              <<<<<<<                                                                                          <----------                                                                <------ZmHOX2a(2)     --------->ATHB51       <---------At4g35610                                     --------->ARR11(3)     <--------ATHB1 ---MYB46(3)                                                   <---------ARR14(2)     -------->ATHB1 -->MYB55(2)                          <---------At4g35610     --------->GLK1(1)       <---------ICU4 --ANAC46                        <---------GLK1(1)       <---------LBD16              --------->YAB1 ->AGL15                       <---------ICU4         --------->ZAT2                 <---------ATHB12 ---AGL3    --------->AtMYB61 <---------YAB1          <---------ZAT2                 --------->ICU4 --RAV1(1) --------->MYB46(3) --------->ICU4<<<<<<<<<WRKY18--------->LBD16           <---------YAB1 - ----->ALFIN1--------->MYB52(1)--------->ATHB12   <---------REM1(1)                  <---------ATHB51   tggaagttgagcgaccatcggaaaacaaaaccatgatttctgctcgtcaatgttgaagctcgggagatcgagagagagatagagacaataattgtcaaat  18608600                                                          --------->AHL20(2)                       <---------TOE1(3)                --------->YAB1                       <---------TOE2(3)               <---------YAB1          --------->ANAC55(2)                  ------>MYB83<---------AHL20(2)          --------->ANAC55(1)                  ------>MYB46(1) --------HVH21        ---------->DOF2        <---------MYB59                           <------------- <<<<<WRKY18 ------->TEIL*TSS                <---------MYB46(2)                   <------ZmHOX2a(1) -HVH21   <---------ANAC55(2)       <-----------HVH21--------->YAB1           ---------->DOF2       < --------->DOF2       <---------DOF5.7(2)   --------->ANAC46              --------->AHL20(2)        <   gtcaaagctaacatgtaactgagttaaagttgtaatctggtcatataccaaactcttataataaataggctaacattttaaaaaggatagtagtacaaaa  18608700                                                                          --------->AHL20(2)                                                                          <---------YAB1                                                                          <---------AHL20(2)                                                                         --------->AHL20(1)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)            <---------ICU4                                               <---------AHL20(1)   -------           <---------YAB1                                             <---------AHL20(2)  --------->ATHB12      <---------ANAC58                                                --------->AHL20(2) <---------YAB1      <---------ANAC58              <---------KAN4(1)                 --------->YAB1     --------->ICU4      --------->TOE2(3)    ----------->HVH21                       --------->YAB1      --------->YAB1   <---------ARR14(2)  ------------>CBF                          ------>ZmHOX2a(1)     <---------ICU4   --------->ARR14(2)--------->ANAC58                           --------->TOE2(3)     --------->ICU4 --AtSPL8  --------->ICU4  <---------ATHB12 <-------MYC3        --------->TOE1(3)     <---------ATHB12 ---------ANAC58     --------->ANAC58       ------->MYC3       ------>ZmHOX2a(2)      <---------ATHB51 ---------ANAC58<-----------GT1   --------->YAB1             <---------ARR11(3)<-----------GT1<------   ctgcgtttccttgattattaactaagccaatgacatgaataatccacatggtcttgaattcttgatccttaataatataatttactcaattatgattaaa  18608800                      <-----------GT1           --------->ANAC46         <-----------GT1                                                 --------->AHL20(2)      <---------ICU4  <---------AHL20(2)                             <---------AHL20(2)     --------->AHL20(2)                                             --------->AHL20(2)     <---------AHL20(2)  <----------DOF2  <---------ZAT6            <---------AHL20(2)         ------ <-------TEIL    <---------ARR11(3)  <---------ANAC58          <---------AHL20(2)        <----------DOF2 -->AHL20(2)  ----------->RAV1(1)    <---------ANAC58        <----------DOF2<---------AHL20(2) <----- ---AHL20(2) --------->ANAC46<-----------GT1         <-----------HVH21   <---------AHL20(2)--------->AHL20(2)   atgttcatttattacacaacatatttacttttaacttatgcgtagtctgaaaatgtgtcccctcttttattttaattttttatttcaacttctttatata  18608900                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                <----                                                                                               ------                                                                   --------->YAB1            --------           <---------ANAC55(2)                                     <---------------AGL15     --------       <---------ARR11(3)                                          --------------->AGL15 --------->AHL20(2)       --------->ARR11(3)       <-------TEIL                       --------->TOE2(3)     <---------AHL20(2)      <---------CCA1(2)      ------>MYB46(1)                <---------ANAC46         <---------AHL20(2) --->AHL20(2)                ------>MYB83             <---------YAB1  --------->ATHB51  --------->AHL20(2) ----AHL20(2)    --------->TOE2(3)      <---------ZAT6------>ZmHOX2a(1)              --------->AHL20(2)   attttcttatatctcgtaaacttagtaaaccaaatacatatagtgctatttatgtcctcatagtgtataccataatttgaattttaaaaaattaataaaa  18609000                         --------->AHL20(2)                         <---------AHL20(2)                         --------->AHL20(1) ------->AHL20(2)        --------->ARR11(3) ------->ATHB51          <---------AHL20(1) --------AHL20(2)        <---------ARR11(3)                                                        <- ------->ATHB12       --------->YAB1                                                               -- -------AHL20(2)      --------->AHL20(2)                                                        ----- -----ICU4           <---------ATHB12         --------->ATHB12                            --------->YAB1 --->ICU4      ----------->GT1                <---------AHL20(2)                        --------->ANAC58 ->AHL20(2) --------->DAG2                   <---------YAB1 <---------AHL20(2)          --------->ANAC58 ->YAB1    ---------->DOF2          <---------ANAC46       --------->YAB1               --------->AtLEC2   attatttgagaaataaagtgtcaataatatattagatggtgttgatatttattggatgttatattaatcgggtttgtatattggatggccaagcataaca  18609100  Previous    Next  AGI:  At3g50150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50130.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50120.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71911.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) Range:  from: 18606714    to: 18608625    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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