Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <-------TEIL                                               <------MYB83                --------->ANAC58                     <------NtERF2             <------MYB46(1)             --------->ANAC46                   <---------ANAC58           <---------------AtSPL3       --------->ANAC58                   <---------ANAC46         <---------ANAC58              --------->SPL7                   --------->bZIP60(1)      <---------ANAC46             <---------ALFIN1                   <---------bZIP60(1)      <---------ANAC58         <---------At5g28300                   <---------ANAC58     <---------ANAC58            <---------WRKY18(1)              <---------AtLEC2        ------>NtERF2                 <-----------GT1                <-        <---------ARR11(3)  <-------TEIL<---------ANAC58--------->YAB1  <---------SPL7           <--- -OsbHLH66 <----------DOF2 <-----------GT1  <---------AtLEC2     <---------ICU4     <---------YAB1 --   ctctcttcgagctctttcatggcgtcaatatacatttcgatgccttgcttggtacgtttcatgaccatattgaccgcacgccatttgtgatagtccatgg  18605100                                ------>MYB46(1)                                --------->ANAC58             <-----------------AGL1           ---------->ID1       ------>MYB83        <-------TEIL     --------->ANAC58    <---------ARR11(3)   --------->ANAC58    <---------------AtSPL3      --------->ANAC58                                                    <    --------->ARR11(3)  --------->SPL7                               <---------DAG2                -- <------NtERF2        <---------SPL7               ----------->GT1   <----------DOF2              --- --------DEAR3(1)    <---------MYB46(3)    <----------DOF2       ---------->ID1          <---------GLK1(1) --------HVH21      <---------------AtSPL3<---------ANAC58   <---------ANAC58        --------->ALFIN1 ------->ETT(1)     <---------------AtSPL8<---------ANAC58   <---------ANAC58<---------TOE2(3)    <--   gtcggagatgttcgtccccatggtggtacggaccaagcgagactgcttgagggaagtaagaattcttgtcgctttttttaagggagagtggaactctgta  18605200                               <------NtERF2                               <---------CCA1(2)                              ------>NtERF2                             <---------ANAC46                             <---------ANAC58                             <---------ANAC58                            <------NtERF2                            --------->ATERF1(1)                            --------->DEAR4(2)                            --------->RAP2.3(1)                           <---------RAP2.6(1)                           ------>NtERF2                           <---------ATERF1(1)                           <---------RAP2.3(1)               <---------STY1(2)               --------->ZAT2--------->DEAR3(1)               --------->STY1(2)         <-----------HVH21 <---------RRTF1(1)      ------>ZmHOX2a(2)    <---------ORA47(2)     <------ZmHOX2a(2)     <---------ERF1    --------->ARR14(3)    <---------RAP2.3(2)                                                    ----    <-----------ARR10     <---------RRTF1(2)                                                     ----    <---------ARR14(3)    <---------ANAC46                                                       ----    --------->ARR11(3)    <---------RRTF1(3)                                                     <---    <---------ARR11(3)    <---------RAP2.6(2)                                                    <---    --------->AGP1        --------->ATERF1(2)                                                    ----    <---------ARR14(2)    <---------RAP2.3(3)                                                   <----    --------->ARR14(2)    <---------DEAR3(1)                                                   <-----    <---------AGP1        <---------ATERF1(2)                                      --------->LBD16   <---------CCA1(2)     --------->ATERF1(1)                                      --------->ANAC55(2) -------TEIL   <---------ZAT2<---------DEAR3(1)                      <-----------GT1       <---------LBD16 ------->CCA1(2)         <---------ABI4(1)                          <---------ATHB12  <---------CCA1(2) ------>ARR14(2)       --------->ALFIN1  <---------ANAC58      ------>ZmHOX2a(2)  <---------ANAC58 -------ARR14(2)     <-----------RAV1(1) <---------ANAC58<----------DOF2          <---------ANAC58<--   gatacagatcttgtcccagctagttgtggcggcgtctctcattacttgctccatcttgtctttgatccaaatcacccattcttcccgtgtctcttcgggt  18605300      <---------ANAC58      <---------ANAC46 <------MYB46(1) <---------MYB46(3) <------MYB83 ----->MYB111(1) ----->MYB111(2) ----->MYB55(2) ------AtMYB61                                       <---------WRKY38(1)                          --- ------MYB46(3)                                     --------->WRKY18(1)                          <--- ----->MYB52(2)                <---------YAB1   <-----------RAV1(2)                   <----------DOF2 ----P<---------ANAC58  <---------ANAC58       <---------TOE1(1)                      <---------DAG2< ----MYB52(1)           <---------ANAC58 <------ZmHOX2a(1)                           <---------ANAC58 -----GAMYB            ---------->ID1--------->ALFIN1<---------WRKY12                <---------ANAC58   tgttggtttcgggtttggagtttttggcgcatcatgaaggtgaggaagtaccaggtcaacatcggtcgtagttgatagtttcttcttgcttttcttctta  18605400                                                     <---------MYB46(3)                                                    <---------AtMYB61                                                    --------->ALFIN1                                                    <---------DEAR3(1)                                                   <---------ABI4(1)                                                   <------NtERF2                                                 <---------DEAR3(1)                                                 <---------ANAC46                                                 --------->ALFIN1                                                 <---------DREB2C(2)                                                 <---------AtMYB61                                                <---------ABI4(1)                                                --------->ATERF1(1)                                                <------NtERF2                                               <---------RAP2.6(1)                                               ------>NtERF2                                               <---------ATERF1(1)                                               <---------ERF1                                               <---------RAP2.3(1)                                               <---------RRTF1(1)                                               <---------ORA47(2)                                               <---------DEAR4(2)                                              <---------RAP2.3(3)                                              <---------RRTF1(2)                                              <---------RRTF1(3)                                              <---------RAP2.3(2)                                              <---------ANAC46                                      <                                              <---------DEAR3(1)                                    <                                              <---------RAP2.6(2)                                   <                                              --------->ALFIN1                                      -                                              --------->DEAR3(1)                                    <                                              <---------ATERF1(2)                                   <                                              --------->ATERF1(2)                                   -                                             --------->ATERF1(1)                                    <                                             <------NtERF2   <---------ANAC58                       -                                             --------->DREB2C(1)                                    <                                             <---------At4g35610                                    <                                             --------->RAP2.3(1)                                   <-                                             <---------ABI4(1)                                     --                                             --------->At4g35610                                   --                                             --------->DEAR4(2)                                    --                                            <---------RAP2.6(1)                                    --                                            <---------RRTF1(1)                                     --                                            <---------ERF1   <---------ANAC58                      <-                                            <---------ORA47(2)                                    <--                                            <---------RAP2.3(1)                                   <--                                            ------>NtERF2    <---------DEAR4(1)                   ---                                            <---------DEAR4(2)                                    <--                                           <---------RAP2.3(3)                                    <--                                           <---------RAP2.6(2)                                    <--                                           --------->ATERF1(2)                                    <--                                           --------->ATERF1(1)        <---------AtMYB61           <--                                           <---------RAP2.3(2) <------NtERF2                     <---                                           <---------RRTF1(3)<---------ANAC46                    <---                                           <---------DEAR3(1)<---------DREB2C(2)                 <---                                           <---------RRTF1(2)<---------RAP2.6(2)                 <---                                           <---------ATERF1(2)<---------MYB46(3)                 <---                                           --------->ALFIN1 <---------ABI4(1)                    ----                                          <---------ABI4(1) --------->ATERF1(1)                  <---                                          --------->ATERF1(1)<---------DEAR3(1)                  ----                                         <---------ATERF1(1)<------NtERF2                       <----                                    --------->ZAT2 <-------GAMYB--------->ALFIN1                -----                                    <---------At4g35610    <---------ERF1                       <----                                    ----------->RAV1(2)   <---------DEAR3(1)                   <-----                                   --------->MYB111(2)  <---------MYB46(3)                     <-----                  --------->HSFB2a(1)   <---------DEAR3(1)--------->ALFIN1      ----------->RAV1(1)<-                  <---------HSFB2a(1) --------->ALFIN1 <---------DEAR3(1)     <---------At4g35610<---                  --------->At4g35610 <-----------RAV1(1)--------->ATERF1(1)  <------NtERF2    <-----                  <---------HSFC1(2)--------->At4g35610--------->ALFIN1       --------->At4g35610<---                  <---------At4g35610<---------ANAC46--------->MYB55(2)<---------MYB46(3)     <------ ------>YAB1      <---------ZAT2   --------->MYB111(1) <---------AtMYB61   <------NtERF2      ------- ------YAB1---------->DOF2        <--------P<---------ATERF1(1)<-------GAMYB  <---------ZAT2 <------ZmHOX2a(1) ---------YAB1    --------->HSFC1(2)<---------ZAT2<---------MYB46(3)  --------->ALFIN1     --------->ALFIN1   tgataatatgagggaaaggaagcttcggtccaaatggtagctggggcggcggcggtggtggtggcggtggaagtggtggcagcaccaatagacgaggagg  18605500      --------->ALFIN1      <---------AtMYB61     <-------GAMYB     --------->ATERF1(1)     <------NtERF2    <---------MYB46(3)    <---------DEAR3(2)   <---------DEAR3(1)   --------->ALFIN1   <---------AtMYB61   <---------ANAC46   <---------DREB2C(2)  --------->ATERF1(1)  <------NtERF2  <---------ABI4(1) ------>NtERF2 <---------ERF1 <---------ATERF1(1) <---------ORA47(2) <---------RAP2.3(1) <---------DEAR4(2) <---------RAP2.6(1) <---------RRTF1(1) ---------RRTF1(3) ---------RRTF1(2) ---------RAP2.3(3) -------->ATERF1(2) ---------ATERF1(2) ---------DEAR3(1) -------->ALFIN1 ---------ANAC46 -------->DEAR3(1) ---------RAP2.3(2) ---------RAP2.6(2) --------At4g35610 ------->DEAR4(2) ------->RAP2.3(1) ------->DREB2C(1) ------->ATERF1(1) ------->At4g35610 --------ABI4(1) -------RAP2.6(1) -------RRTF1(1) --->NtERF2 -------ATERF1(1) -------ORA47(2) -------DEAR4(2) -------ERF1 -------RAP2.3(1) ------RAP2.3(2) ------RAP2.6(2) ------RRTF1(2) ------RAP2.3(3) ------ATERF1(2) ----->ATERF1(2) ------RRTF1(3) ----->ALFIN1 --NtERF2<---------AtMYB61 ---->ATERF1(1) -----ABI4(1)           --------->DOF5.7(2) ----DEAR4(2)<---------MYB46(3) ----RAP2.3(1)       <------NtERF2 -----NtERF2<---------DEAR3(1)                    <-------GAMYB ------DEAR3(1)    <---------DEAR3(1)            --------->MYB52(2)                             ----- ----ATERF1(1) <---------AtMYB61               *TSS              <------ZmHOX2a(1)              ----- ------DREB2C(2)<---------MYB46(3)       --------->ICU4<---------TOE2(3)               --------->DAG2 ---DEAR3(1)--------->ALFIN1      --------->At4g35610  <---------TOE1(3)    ----------->HVH21 ------- -->ALFIN1  <---------AtMYB61   <------ZmHOX2a(1)<---------MYB46(3) <------------CBF  ---------->DOF2   cggcggcggtggaggtggtggtcgtcgtttactaggagttgccatttttgtttgttgaaggtttttaggagattgagagtgacatagaaaaagtctaaaa  18605600                                        <---------AHL20(1)                                        --------->AHL20(2)           --------->At4g35610   ---------->ID1                       --------->ATHB12    --------->ANAC55(2)     <------------CBF                     --------->MYB46(3)    <---------ANAC55(2)  <-----------HVH21                      -------->P    ----------->GT1   <---------At4g35610<---------YAB1        ------->GAMYB <---------ARR14(2)   --------->At4g35610<---------AHL20(2)   <---------MYB111(2) --------->ARR14(2)---------->DOF2 ------------>CBF           --------->MYB46(3)    --------->YAB1--- ---->ANAC58  --------->ZAT14  <---------MYB46(3)             <---------MYB55(2)   <---------ATHB12 ---->ANAC58 ------->GAMYB<---------YAB1--------->YAB1   --------->YAB1 <---------WOX13(1)        <-- --->DOF2--------->MYB46(3)--------->ATHB12       ------>ZmHOX2a(2)  <---------ATHB12          ------   gcaaatatgtaacaactgaactaaagctgtcattggtcgcaatattatttgatctgtaatgacaacaaccagtgattgacatctaatcatacttatacat  18605700                         --------->MYB52(1)                      --------->ANAC58                                          <---------------AGL15                      --------->ANAC58                     <---------ANAC58     --------------->AGL15                      --------->YAB1                       <---------ANAC46    <-----------------AGL3                      --------->ANAC46        <---------ANAC58            --------->ZAT6 ------>AHL20(2)      --------->ANAC55(1)     <---------ANAC58    <----------DOF2                   < -------AHL20(2)      --------->ANAC55(2)<----------DOF2   <---------ANAC58    ----------------->AGL2 --->TOE2(3) --------->GLK1(2)     <---------AHL20(2)      --------------------->WRI1          <-----   taaaatgtcttaaacaatctttaaacgtaatggatatataatgctttggcgagcgatgttttcttggacttttcttccactactcttaatagaaagactt  18605800                                  <---------ZAT6                             <---------ANAC58                        <---------AHL20(2)                       --------->AHL20(1)                      <---------AHL20(2)                    --------->AHL20(2)   <---------CCA1(1)                           <---------ANAC58                   --------->AHL20(1)   <---------ARR11(3)                           <---------ANAC58             ----------->GT1 <---------ANAC58--------->AHL20(2)               --------->YAB1      <--        <----------DOF2<---------AHL20(1)<---------RVE1(1)               --------->AHL20(2)       --- -----------GT1    <---------AHL20(1)   --------->ARR11(3)          --------->AHL20(2)         <----- -----DOF2  <---------TOE2(3)<---------ANAC46<---------AHL20(2)     <---------AHL20(2) --------------   tattacaagtctttaatgtaatatatatatttcgtagagtgagatatttatttgaaacattcactcttatttaaaaaaaatgaaaatgcgttgtactctt  18605900                                           --------->ATHB12                                           <---------ICU4                                           <--------ATHB1                                 --------->ATHB51                                 <---------ICU4                                 --------->ATHB12                                <---------YAB1                                   --------->TOE2(2)                                --------->ICU4                                 --------->GLK1(2)                              <---------ICU4                                   <---------ARR11(3)                         <---------MYB52(1)-------->ATHB1                      --------->ARR11(3) -------HSFB2a(2)      <---------ANAC58   <---------ATHB12                    --------->RVE1(1) ------>HSFB2a(2)      <---------ANAC58   --------->ICU4            ---------->DOF2 ----YAB1         <---------AHL20(2)      <---------YAB1   <-----------GT1  --------->AHL20(2) ->AtSPL8  <-----------GT1    --------->YAB1 <---------WOX13(1)   <---------YAB1 --------->TOE1(2)   atagaaatactatatactatataatgcgttattcattattgacaatgattgatacttgaattatccatatgaaagaaaaaaaatctacgaattagaaaac  18606000  Previous    Next  AGI:  At3g50140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50130.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71911.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) Range:  from: 18603455    to: 18605547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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