Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->SPL7                        <---------ANAC58                        <---------ANAC58      ------>MYB83                      <-----------ARR10--------->ANAC58                     <---------MYB52(1)--------->ANAC58                  <------NtERF2     <---------SPL7                --------->ARR14(2)<---------------AtSPL3                                    ---------              --------->LBD16  --------->ICU4 --------->ANAC58                             <---------TOE2(3)            <---------LBD16  --------->YAB1   --------->ANAC58                 ---------->ID1     <-------TEIL------>NtERF2 <---------YAB1 ------>MYB46(1)             <-----------RAV1(1) -------->HVH21 <---------ARR14(2)<---------------AtSPL8         <---------GLK1(1)         <---------TOE1(3)   gtgacggtccatagaccggagccgtttcttaccatgatggtacggaccaagcgagactgtctgagggaaatacgatttgttgtcgttttcttgaaggtaa  18597900                                                                                                <----                                                                                                <----                                                                                                -----                                                                                      --------->MYB46(3)                                                                                     --------->ANAC58                   <---------At4g35610     <---------ICU4                            --------->ANAC46                   --------->At4g35610  <---------bZIP60(1)                          --------->ANAC58              <-------TEIL              --------->bZIP60(1)      <---------ANAC58 <------ZmHOX2a(2)             --------->CCA1(2)     <---------ANAC46              <---------ANAC58<---------ARR11(3)            <---------ARR14(2)   --------->ZAT14        <----------DOF2          --------->ARR11(3) <   <---------GLK1(1)   -------->P<---------ZAT14       <---------ANAC58      ------>ZmHOX2a(2)  ----- -->GT1     --------->ARR14(2)  --------->ALFIN1       <---------ANAC58  ----------->HVH21<---------ATHB12   tatggaactctgtagatacagagcttaccccagagtgttgtgtcatcatctctatgtgcttgttcgagcttgtctgtgatcgagatcacccaatcgtctc  18598000                                                                                        ----------->GT1                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR11(3)                                       ------>ZmHOX2a(2)                            --------->ARR14(2)                                     --------->ARR14(2)          ------->TEIL       <---------ARR14(2)                                     <---------ARR14(2)       <---------YAB1        <---------AGP1    <----------DOF2              <---------ANAC58         <-------GAMYB            <---------ARR14(1) ------->TEIL                    <---------ANAC46        <---------MYB46(3)        <---------CCA1(2) --------->GLK1(2)      <---------ANAC58                <--------P               ------>ZmHOX2a(2) -----O2                <---------ANAC55(2)            <-------GAMYB          --------->ATHB12 -----ANAC46            <---------ANAC58              <---------MYB46(3)     <---------YAB1     <---- ------>GT1             <---------ANAC46            <---------ANAC58       ------>ZmHOX2a(2)    <---- ---------CCA1(2)       --------->ANAC55(2)         <---------ANAC58     <---------ARR11(3)     <---- ---->O2        <----------DOF2  <---------ANAC58  <---------At4g35610   --------->ARR11(3)     <----   gtgaatcttttggactctctttgattacgtagatagcgggatcggattgagtttgctggttgttatgaatgttttgatcttgatcggatctggtgatttc  18598100                                                                       <------ZmHOX2a(2)                                                                      --------->ARR14(2)           <------MYB83                                               <---------ARR14(2)          <---------AtMYB61                                           --------->ARR11(3)         <--------P                <---------ANAC55(2)                <---------AGP1      --------->LBD16              --------->ANAC55(2)                <---------ARR11(1)      <---------LBD16        --------->MYB46(3)                       <-----------ARR10     --------->TOE1(2)   <---------WOX13(1)                           <---------ARR11(3)     <-------     <---------LBD16   --------->ATHB12                              <---------ARR14(1)      --------    <---------LBD16   <---------YAB1                                 <---------CCA1(2)       -------- -----ANAC58        ------>ZmHOX2a(2) <---------GLK1(2)             --------->LBD16          <------- -----ANAC46      <---------ARR11(3)  --------->ARR14(2)          <---------LBD16    --------------->AtSPL8 -----LBD16<------MYB46(1) <-----------GT1       <---------ANAC46<---------ANAC46    --------------->AtSPL3 -----ANAC58      --------->ARR11(3)  <---------ARR14(2)<---------ANAC46------>ZmHOX2a(2)--------->MYB52(1)   gggtaaaccggggaggttttgatcttgattaaccaatacggattcttggttttgtgtttcgagtttttcgcggatcttaagggtgagtaagtaccagctc  18598200                                             --------------->AGL15                           <---------AHL20(2)<---------------AGL15     <----------DOF2 ------>NtERF2   <---------ANAC58 --ZAT2  --------->HSFB2a(2)         <---------ANAC58 ->At4g35610        --------->RAP2.6(2)      <----------DOF2                                   *TSS ->ZAT2  <---------HSFB2a(2)    <-----------RAV1(1) <---------TOE2(3)                       --------- --At4g35610       --------->MYB46(3)<---------ANAC46                                     <---------WOX13(1)   aacatgtctttgtagaagacagccaccattttttttgttgcttgaagcttttttaagaaaatgagggagtgagagagaaggaagtatatgtgaatgattt  18598300                                                                     <-----------TBP                                                                   <---------CCA1(1)                                                            <---------ICU4                                                            <--------HAHB4                                                            --------->ATHB51                                                           --------->ICU4                                                         <---------------AGL15                                                         --------------->AGL15                 <------------CBF                        --------->TOE2(3)              --------->ANAC55(2)                        --------->TOE1(3)              <---------ANAC55(2)                        --------->YAB1         ----------->GT1                                ----------------->AGL3       <---------WOX13(1)         ------>MYB46(1)       ----------------->AGL2      <------------CBF            --------->MYB52(1)    <-----------------AGL3     --------->ATHB12             ------>MYB83         -------->P <---------ARR11(3)               <-    <---------YAB1              --------->MYB46(3)    ------->GAMYB<---------RVE1(1)              ---    <---------AHL20(2)          <---------MYB59      <---------MYB55(2)                           <--  --------->CCA1(2)            --------->ANAC58      --------->MYB46(3)--------->YAB1             <-- --------->ARR11(3)            --------->ANAC58      <---------MYB111(2)                         ---- <---------ARR11(3)     --------->ICU4   ------>ZmHOX2a(2) <---------YAB1                        ---- >ATHB12 <---------MYB46(3)   ------->TEIL      --------->YAB1    --------->ARR11(3)         --------   gaagatataattggttacttattgtacttatggacccaactgatctgtaatgacaacaaccataattagatatttataaacacacacacacacatattaa  18598400                                                 <---------YAB1                                               <---------ICU4                                               --------->ATHB51                                               <---------AHL20(2)                                               --------->AHL20(2)                                              --------->ICU4                            <---------RAP2.6(2)                                            ------>MYB83                                <---------DEAR3(1)                                            ------>MYB46(1)                            --------->SPL7            --------->DAG2                <---------MYB59                           <---------ANAC58 <----------DOF2                          --------->TOE2(3)                         <---------ANAC58 --------YAB1----------->GT1              <---------MYB46(2)                       <---------------AtSPL3 ------>ARR11(3)                   --------->ARR11(3)                     <---------AHL20(2)       -- -------AHL20(1)                   <---------ARR11(3)<-----------GT1     <---------AHL20(2)    ------ -------ARR11(3)                  <---------CCA1(2)<---------AHL20(2)    <---------AHL20(1) <-------- ----->CCA1(1)          ---------->DOF2  <---------ANAC55(2)             --------->AHL20(2) <-------- ----->RVE1(1)    --------->MYB46(3)     --------->ANAC55(2)             --------->AHL20(1) --------- ->AHL20(2)---------->DOF2    --------->AHL20(2)--------->AHL20(1)      --------->AHL20(2) <---------ANAC46   tatctttgaagaaaaaagtaacaactaaaagtttatatatcttacctaattattttaactactaaaatatacaaattaatttggaatcgtgcggcttaaa  18598500                                                   <---------ETT(1)                                                <---------ARR14(2)                                                --------->ARR14(2) --------->GT1                                 <---------GLK1(1)                            <-------- ---->DOF2             ------->TEIL            --------->GLK1(1)                         <----------DOF2 -------AGL15    <---------ARR14(2)           --------->ARR14(2)                    <-----------GT1<< --DOF2     ----------->GT1              <---------At5g28300                   <---------YAB1    <--- ------>AGL15    --------->ARR14(2)     <-----------GT1                   <---------GLK1(2) <--------   agggtaacatagaatagaaaatatgcatttgtgttctataatttaccatatatccgaccattatccatagataatagaattttgatataccctttcgttt  18598600                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58               ------>ZmHOX2a(1)           <---------ARR14(2)           --------->GLK1(2)           ------->TEIL                                 <---------HSFB2a(2)           --------->ARR14(2)                --------->ANAC46   <---------------AtSPL3                    <---------ANAC55(2)   <---------------AtSPL8                    --------->ANAC55(2) -ANAC58--------->ANAC58            --------->MYB59--------->YAB1 <<<<<<<<MYB80--------->TOE1(3)     --------->DAG2--------->MYB46(3)                  <---------MYB46(3) ------AtMYB61--------->TOE2(3)   <--------P <---------ANAC58                  <---------YAB1       < -ANAC58--------->ANAC58 ---------->DOF2     <---------ANAC58               ---------->TaMYB80    ---   tggtttgagtacgaatccttaacgcatcaaagaagggtaaggtcattgcgcaaccatactagaaacgctcgtatggggaatatgagagtcgttggacaag  18598700                                                                                                   <-                                                                                               <-----                         ------------>CBF                                                      <-----                   <---------ARR14(2)                    --------->RVE1(1)                  ---------               <-----------------AGL1                   <---------ARR11(3)                 <---------           <---------ANAC58                          --------->AHL20(2)                <----------DOF2           <---------ANAC58                          <---------AHL20(2)                <---------DAG2 ---------TOE2(3)  --------->ARR14(2)    ---------->DOF2--------->ARR11(3)   <-----------GT1<-------- ------>CCA1(2)---------->ID1 --------->YAB1<----------ID1      <----------DOF2<---------------------   ataagattatttgtcttgtcgaatttgggcaattttaaacgataaaagcacaaaataaaatctcttctttagtggtttttttcttctcccttttttcctt  18598800  Previous    Next  AGI:  At3g50120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50150.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50130.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71911.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59797.1); contains InterPro domain Protein of unknown function DUF247, plant (InterPro:IPR004158) Range:  from: 18595983    to: 18598295    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version