Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            -----------                                                                                        <-----------RAV1(2)                                           <---------ICU4                              <------ZmHOX2a(2)                                          --------->AHL20(2)                     --------->TOE1(2)                           --------->AHL20(2)                                    --------->TOE2(3)                --------->TOE2(3)        <---------AHL20(1)             <---------YAB1<---------ARR14(2)                --------->TOE1(3)        --------->AHL20(1)          ----------->TGA1--------->At4g35610                <---------MYB59       --------->AHL20(2)  ---------->DOF2     --------->ARR14(2)      <---------YAB1       <---------AHL20(2) <-----------GT1    --------->AHL20(2)  <---------At4g35610 --------->GLK1(2)         <---------YAB1<---------AHL20(2) ----------->GT1   <---------ARR14(2)   caaattctatgtttgtaacctaaactgttttaattatctataaaatatttacaatttagcgaaagaaaaaaatgacgatggaacctcagatcaggtttaa  18588900                                                                                           <---------                                                                                         <---------AHL20(2)                                 --------->ANAC46                                     --------->AHL20(1)                  <---------AHL20(1)                                                  <---------AHL20(1)                  --------->AHL20(1)                                            ------>ZmHOX2a(2)                  --------->AHL20(2)                                          --------->AGP1                  <---------AHL20(2)                                          --------->ARR11(3)                 --------->AHL20(2)      <---------YAB1                       <---------ARR11(3)                 <---------AHL20(2)     --------->AHL20(2)      <----------DOF2<------ZmHOX2a(2) >GT1  <---------YAB1          --------->ZAT6         <---------ATHB12       <---------GLK1(1)   tacaacaatatgactaaaattaaatttctatttccactacatttttattcgctccaatccatctccctttctaacttagagatcttaatattttttcttc  18589000                                                       ----------->GT1                                                   <-------GAMYB                                                  <---------MYB46(3)                        <-----------GT1           --------->MYB52(2)                <-----------GT1                   --------->MYB55(2)                       --------->AHL20(2)            <----------DOF2                       --------->MYB111(2)                     --------->AHL20(2)        <---------GLK1(1)              <---------GLK1(1)                            ----------->GT1 --GT1  --------->GLK1(1) --------->ZAT6        <---------MYB52(1)           --------------->AGL15   atatttggagatttcttttttcaaatttacactaaaatttgaaatctccagtttgttgggaaaaaactcaactccataactccatattgaaaataaaaaa  18589100                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                              ---------->DOF2                                                        <---------ICU4                                         <---------ICU4 --------->MYB52(1)                                    <---------AHL20(2) <---------ATHB51                                    --------->AHL20(2) <---------AHL20(2)                           --------->ANAC46          --------->YAB1----------->GT1                           --------->ANAC58        --------->AHL20(2)                   <---------ARR11(3)   --------->AHL20(2) ----------->GT1                   <-------                   --------->ARR11(3)   <---------AHL20(2) --------->YAB1                <---------ARR11(3)              <---------------------WRI1<---------ATHB51--------->YAB1<-----------GT1    --------->ARR11(3)         --------->CCA1(2) --------->ANAC58    ------>ZmHOX2a(1)--------->ICU4       ---------->DOF2   tgtttatgaagaaatgggagagatgttctaagcaaattttaaataattcctcttaaaataatggtaaagatgttactacattgaagtcaaagatgtcaca  18589200                                                                      --------->AHL20(1)                                                                      <---------AHL20(1)                                                                   --------->AHL20(2)                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                              <---------MYB52(1)                                                     --------->AHL20(2)                                                     <---------AHL20(1)                       <---------AHL20(2)            --------->AHL20(1)<---------AHL20(2)                       --------->AHL20(2)       <---------AHL20(2) --------->YAB1       --------->TOE1(3) <-----------GT1   <---------YAB1            --------->YAB1 ----------->GT1             --------->TOE2(3) ----GT1      ----------->GT1<---------AHL20(2) --------->AHL20(2) <---------AHL20(2)<-----------GT1   atttaagcatacaatatagttaaaattatatataaaaaaacccctaagaataaaatataatccagttaattatatattttgagaatataaccctaaactc  18589300                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                 ------------------>SPL14                                                                                 <-----------GT1                                                                          <------NtERF2                                                                         ------>NtERF2                                                                         <---------RAP2.6(3)                                                                        >>>>>>>>>AtERF-4                                                                        --------->ATERF1(2)                                                                        >>>>>>>>>AtERF-2                                                                        --------->RRTF1(3)                                                                        >>>>>>>>>AtERF-1                                                                        --------->ANAC58                                                                        --------->RRTF1(2)                                                                        --------->DREB2C(2)                                                                        --------->DEAR3(1)                                                                        --------->RAP2.6(2)                                                                        --------->RAP2.3(2)                                                                        --------->RAP2.3(3)                                                                        >>>>>>>>>AtERF-3                                                                        >>>>>>>>>AtERF-5                                                  --------->AHL20(2)    >>>>>>>>>AtERF-7                                                  --------->AHL20(1)    --------->ANAC46                                                  <---------AHL20(2)    --------->ANAC58                                             --------->AHL20(1)        --------->DEAR3(2)                                             <---------AHL20(1)        --------->RAP2.3(1)                                             --------->AHL20(2)        --------->ERF1--------->LBD16                                       --------->At4g35610             --------->ATERF1(1)          --------->LBD16              --------->ZAT2                  --------->RRTF1(1)         ----------------->AG          <---------At4g35610            --------->At4g35610      ------        XXXXXXXXXXXXXXXXXXXXX>MIR830*  <---------ZAT2  ----------->GT1<---------At4g35610      <-----    <<<<<<<<<TBF1                   *TSS     <---------AHL20(2)    --------->WRKY38(1) --------->SPL7   tgtttcttcttccccaaacagtttatgccaaattcactcccagctaataaaataaaatagaaaaactcgttgagccgccattgtttccgtactatggagc  18589400             --------->DEAR3(1)           ------>NtERF2           --------->ABI4(1)          --------->DREB2C(2)          --------->DEAR3(1)          ------->GAMYB         --------->DEAR4(2)         --------->MYB46(3)         --------->DEAR3(2)         <------NtERF2         --------->ATERF1(1)        <---------ATERF1(1)        ------>NtERF2       --------->DEAR3(1)       <---------ALFIN1                               <---------AHL20(2)      --------->MYB46(3)                              --------->AHL20(2)      <---------MYB55(2)            <----------DOF2 --------->TOE2(3)                  <---------ANAC46    --------->ANAC58        ---------->ID1  <----------DOF2                       <---------ANAC46    --------->ANAC58     <-------TEIL   <----------DOF2                        <----------DOF2 --->At4g35610------>NtERF2 <---------CCA1(2)       <----------DOF2            <---------DAG2 ----At4g35610--------->LBD16   <----------DOF2 <----------DOF2             <---------ALFIN1      <--   ttaaactagccaccgccgagaaacaagttcgtctctttctttctttctttctttctttaatttctcagggcaaaattcccacttttgtggagtcgaatta  18589500                                                                             <---------ANAC46                     <---------MYB52(1)                                     <------NtERF2                    --------->LBD16                                       --------->ALFIN1                    <-------GAMYB                                         <---------DEAR3(1)                   <---------ANAC46           <---------REM1(1)         <---------ANAC58             --------->MYB46(3)             <------MYB46(1)             <---------ANAC58            -------->P --------->AHL20(2)  <---------MYB46(3)           <---------ANAC46           --------->MYB52(1)       <---------WRKY18(1)                 <---------AtLEC2           <-----------GT1         ----------->HVH21                <---------GLK1(1)         <---------MYB46(2)      <---------ANAC58                   --------->CCA1(2)         <---------MYB52(2)      <---------ANAC58                  <---------GLK1(2)         <---------MYB59<---------YAB1    <--------P               <---------ARR14(2)         <---------MYB111(1)    <-------TEIL<------MYB83           --------->ARR14(2)               < -------GLK1(2)    ----------->GT1<----------DOF2                ----------->ARR10                 --   gcttctctgtaactaaccattccgttaaaataggtgcttgacgagttggtgaagctattgcagagtcgagatttgcgtggcgaaaatggaaactggaagg  18589600                                                                --------->CCA1(2)                                                                --------->ARR14(1)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                  <---------ANAC58                                                  <---------ANAC58         --------->GLK1(2)                                              <---------HSFB2a(2)  <------MYB83             --------->ANAC46              ------>ZmHOX2a(1)   --------->ARR11(3)   <-----------GT1                        --------->TOE1(2)    --------->ARR11(1) ---------ICU4           <---------YAB1  ------>ZmHOX2a(2)   ----------->ARR10----------->HVH21------ ------->ICU4<----------ID1   <-----------GT1 --------->HSFB2a(2)  <------MYB46(1)   <----------DOF2-   aatttttacatgtttacgacaaaaatgctgattcaccaagtgatccttcgaggcgttctcatgaagatttggttcagtttctgacaacttttaagaagaa  18589700         --------->ANAC58         --------->ANAC58       <---------AtLEC2   --------->CCA1(2)                                                                                -  --------->ARR14(2)                                                                      --------->HSFB2a(2)  <---------ARR14(2)                                                                 --------->HSFC1(2)  <---------ARR11(3)                                                            <---------At4g35610 -  --------->ARR11(1)                                        <---------TOE2(3)   --------->At4g35610 -  --------->ARR11(3)                            --------->ATHB12       <----------DOF2  --------->At4g35610 ---->DOF2   ----------->GT1          <---------YAB1       ---------->DOF2   <---------At4g35610<---- ---------->ARR10              --------->ANAC46--------->ICU4       ---------->ID1   <---------HSFC1(2)   agaagatttgcaagtaagtgaaactgaagaaatacacaatgtgattgtaatctttggccactaaagttttgttcttttttgctgctaagcttctgaaatg  18589800  Previous    Next  AGI:  At3g50100.1    Description:  exonuclease. similar to exonuclease [Arabidopsis thaliana] (TAIR:AT5G67240.1); similar to Os04g0650600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054092.1); similar to OSJNBb0059K02.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE04503.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 18589336    to: 18591577    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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