Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->AHL20(1)                                                                        <---------ARR11(3)                                                                        <---------AHL20(1)                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                --------->GLK1(1)                                                               --------->ARR14(3)             <---------TOE2(3)                                 --------->ARR11(3)   <---------WOX13(1)                                         --------->RVE1(1) --------->ATHB12                                          ---------->DOF2<---------GLK1(2) --------->ATHB51                            --------->ARR11(3)--------->ARR14(2) ---------YAB1            <---------HSFB2a(2)<---------ARR11(3)<---------ARR11(3) -------->ICU4            --------->HSFB2a(2)<---------AHL20(1)<---------ARR14(3)           <-------- ----->At4g35610       <----------DOF2       --------->AHL20(1)<---------ARR14(2)           --------- ------>RAV1(1)  <-------TEIL  ---------->DOF2<---------AHL20(2)<---------GLK1(1)--------->YAB1   gcataattgacaattgatgttcatacttttagaaaaagaagacttgatatatttgtttactaaaagatctccaaaatattctctgataacaaaattatat  18586000                                                                                                   --                                                                                                   --                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                            <---------ICU4                            <---------ANAC46                                           --------->ICU4                         <---------At4g35610                                           <---------YAB1                         --------->At4g35610                                        <---------YAB1                            --------->ZAT2 ----         ----------->GT1             <---------YAB1                               <---------ZAT2 ---- <---------YAB1        --------->AHL20(2)--------->YAB1                          <-----------RAV1(1) -AHL20(2)     <----------DOF2<-----------GT1                                  <---------At5g28300 <- >AHL20(2)  <-----------GT1 <-----------HVH21  <-----------GT1                <-----------GT1   <----   atgctgataacttgttactttcttataaaatgtcacattactatcatttttacatagtataagaaaacatatgtgatttgttactgctgcgtctgtatca  18586100                                                <---------------AGL15       <---------HSFB2a(2)                      --------------->AGL15   <---------YAB1                              <-----------------AGL3 <---------ANAC58 ------->TOE2(3)                        <-----------GT1           --------->HSFC1(2) ------->TOE1(3)                   <---------RVE1(1)              <---------HSFC1(2) ---->P--------->HSFB2a(2)        --------->ARR11(3)         <---------TOE2(3)                      < --->TEIL                      <---------TOE2(3)<----------DOF2<------ZmHOX2a(1)                   -- --------DAG2                 <-----------GT1  <-----------------AGL2 <---------ANAC58            <-- -------GT1              <---------YAB1<-----------GT1     ---------->DOF2                 ----------   accttatttttagaaaacaaatagtatatgatttacgatatttatctcttctttttttggttaaaggatgtttcttatcaaaccgtgctgtttcccaatt  18586200                                      --------->AHL20(2)                                      <---------AHL20(2)                                     <---------AHL20(1)         ------------>CBF                                     <---------AHL20(2)       <---------WRKY12                                     --------->AHL20(2)       <---------WRKY38(1)                                     --------->AHL20(1)      --------->WRKY18(1)                                    --------->AHL20(2)    --------->MYB59   --------->YAB1                   <---------AHL20(2)   --------->ZAT14 ------------CBF                 <---------AHL20(2) --------->ZAT14                <---------ANAC46 ------->ATHB12               --------->TOE2(3)   --------->ANAC46               --------->ZAT18 -------YAB1    <-----------GT1  --------->AHL20(2) <---------ZAT14    ------------>CBF -->CBF  --------->YAB1 <-----------GT1        <-------TEIL<---------bZIP60(1)<---------ANAC46   ttcattgaaaatcaaaattcacacatttacattcttaaattaatttacatacacttcagtgaggtcaacaatgaacaattaagtggagtattcaaacagt  18586300                 ----------->TBP          ------>MYB83          ------>MYB46(1)        --------->MYB46(3)        <---------MYB46(2)        <---------MYB55(2)        <---------MYB111(2)        --------->AtMYB61              --------->DAG2        <---------MYB111(1)           ---------->DOF2       --------->ANAC58            <---------ANAC55(2)       --------->ANAC58            --------->ANAC55(2)--------->TOE2(3)      ------>NtERF2                --------->ANAC46   --------->YAB1         --------->ANAC58     <--     --------->RAP2.6(2)           --------->ANAC58 --------->GLK1(2)        --------->ANAC58   -----  --------->ANAC46                 --------->ANAC55(1)--------->TOE1(3)     --------->DAG2      <----  --------->ANAC58                 --------->ANAC58<---------GLK1(2)       ---------->DOF2      -----  --------->ANAC58            <---------ICU4  ------>ZmHOX2a(1)   <-------TEIL                 ------   ttcgaagccaccaaactctatatatatcaacatcatcacgtaaagttcctatagaatcttaaaacacatacacttgaaaaagccaactcaaaaaaaaaaa  18586400       --------->PCF2     <------MYB46(1)                 --------->CCA1(2)     <------MYB83                   --------->ARR14(2)   <---------WOX13(1)               <---------ARR11(3)  <------------CBF                  --------->ARR11(3) --------->ATHB12                   --------->ARR11(1)                   --------->ATHB12 ----------CBF                      <---------ARR14(2)        <----------DOF2                       < ---->AHL20(2)                    ----------->ARR10           <---------DAG2                    <---- -----AHL20(2)           --------->ANAC58               --------->YAB1  --------->ICU4         <----- ---->AHL20(1)           --------->ANAC58         <-----------HVH21     <---------ZAT6        <------ --->AHL20(2)          <---------AtLEC2   <-----------GT1  <-----------GT1 <---------YAB1   <--------   aattgattggtcccatggattatttgcaagtaagtgaagatatgttacacaatgtcacttataactttattgtagtgattaatgagttttggttattttt  18586500                                   --------->ANAC46                                  --------->HSFB2a(2)                           --------->LBD16                                  ------>NtERF2                                 ------>NtERF2                                  --------->LBD16                             <---------LBD16                                  <---------HSFB2a(2)--------->ATHB12      <---------GLK1(1)                                 --------->ANAC46    <---------ICU4        <---------HSFB2a(1)                                <---------LBD16     --------->ICU4        <-----------ARR10                              <---------ARR14(2)    <---------YAB1        --------->GLK1(2) ---------AHL20(2)         <---------ANAC58       --------->YAB1     ---------->DOF2               <- -----AHL20(2)     <---------TOE2(3)  --------->ANAC58     ---------->DOF2--------->ARR14(2)   ------ ----YAB1          <---------TOE1(3)  --------->ANAC58 <---------WOX13(1)<---------GLK1(2)     ------ ---AHL20(2)  <---------YAB1  --------->ARR14(2) ------------>ATHB5--------->ANAC58          -------- -YAB1---------->ID1       <---------ANAC58 <---------ATHB12       --------->ANAC58   <---------ATHB12   atttttttgtttttttatgctaaggctatgcgtctccgcgaagccaatcgtctcatgattgcaaagttcaagaaagaatctccggctaatgactctcctg  18586600                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <-------GAMYB                                                                  <---------YAB1    <---------ANAC58                                                                 <---------AHL20(1)--------->MYB55(2)      <-------GAMYB                                        --------->ANAC55(2)     <---------MYB46(3)     --------->ALFIN1                                      <---------ANAC55(2)     <------MYB46(1)   --------->ALFIN1                                  --------------->AtSPL8        <------MYB83 ----------RAV1(2) --------->YAB1                <---------AHL20(2)                --------->MYB52(2) --->LBD16      --------->WOX13(1)       <---------YAB1    ----------->GT1        <---------AtMYB61 >ZmHOX2a(1)--------->GLK1(1)       <------ZmHOX2a(1)<---------------AtSPL3    <---------MYB46(3) --->RAV1(2)<---------GLK1(1)     <---------TOE2(3)  <---------------AtSPL8 <-----------RAV1(1)   aacaggtgtgttggaaatctatcaaaacatgtttttgaggaatatgtttgtataatttgtaccgtaatatgtttgaaaatgttgttggttgtacagaggc  18586700                      --------->LBD16                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58                    <---------LBD16                  <---------ARR14(2)                  --------->GLK1(2)                  --------->ARR14(2)              --------->YAB1             <---------ATHB12         <----------DOF2       <---------TOE2(2)                     <--       <---------WRKY18(1)            <---------DAG2        <---------TOE1(2)             <---------AHL20(2)      --------->WRKY38(1)         <---------ETT(2)          <---------TOE2(3)        <---------TOE2(3)     <---------WOX13(1)           --------->ETT(2) --------->YAB1               <----------DOF2   ---   tagttcgattgaccaatgagaatccgcaatacaatgtcgactttttgtttcattcatactccaaggtttcttaaacaatagtcttttgatgtttaatagt  18586800                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)              -         <---------ANAC46                                          <---------CCA1(2)     <-----------HVH21 -------CCA1(2)          <---------DAG2                  <------ZmHOX2a(1)              ----------->GT1 ------>GLK1(1)          <----------DOF2   <---------AHL20(2)  <---------ANAC46    --------->YAB1   <   atatccaagttttgtatatttcatgcgcttttttttaagacttcttaaattgctaaacaggactggtttgtatccgatgttggaatgaaaatgtcaaatg  18586900  Previous    Next  AGI:  At3g50090.1    Description:  exonuclease family protein. similar to exonuclease [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to Os04g0650600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054092.1); similar to OSJNBb0059K02.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE04503.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 18586415    to: 18588319    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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