Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(2)                                     <---------ATHB12                                   --------->WOX13(1)                                 <------NtERF2                                <---------RAP2.6(3)                                <-----------HVH21                               --------->RAP2.6(2)                               --------->RAP2.3(2)                               --------->DEAR3(1)                               >>>>>>>>>AtERF-4                                             ---------                               >>>>>>>>>AtERF-3                                             ---------           --------->AHL20(2) --------->RAP2.3(1)                                         <----------    --------->MYB52(1)  ---------->DOF2            <---------ICU4             --------->YAB1---------    ------>MYB46(1) --------->At4g35610   --------->AHL20(2) <-----------GT1 <---------ATHB12    ------>MYB83<-----------GT1--------->RAP2.3(3) --------->YAB1          --------->WOX13(1)    ---- ----------GT1  --------->MYB52(1)<---------WRKY12--------->ICU4<----------DOF2      <---------DAG2   taaacctatcgaagtaattaacagctaaaagagccgtcaatgaattaaacccataatgagatttcactttaaaaatccaatcaagagccttttcacgaca  18577400                                            <---------ANAC58                                       --------->ANAC58      <---------GLK1(2)         <---------ICU4                                       ----------->RAV1(1)      --------->ARR14(2)        ---------->DOF2                                     --------->ANAC46 >ANAC58                       --------->ICU4                                     --------->ANAC46 >ANAC58              <---------ARR11(3)  --------->ARR14(2)                 <---------ICU4 -GT1 <---------ARR14(2)   <-----------TGA1 <---------ANAC58                <---------YAB1    ------- >ANAC46              --------->ARR11(3)  <---------ARR14(2)              --------->YAB1      <------ ----->ANAC46       <---------TOE2(3)  --------->ANAC58   ---------->DOF2 <---------ICU4    ---------   caaaaccagaaactcatcatctaagatttcgtcataaagacacggttcttgtttcgaaatcaaagttgataactcatcatcatcccacaacatatcatga  18577500                                                  --------->ARR14(2)                                         <-----------HVH21                                        --------->TGA1a                     ----------->GT1    <---------TGA1a                  ================================bZIP_DOF -->ICU4          ---------->DOF2       <---------O2 ---YAB1      <---------AHL20(2)        --------->O2                                    ---------->DOF2 >YAB1        --------->AHL20(2)  <---------ALFIN1<-----------ARR10              ------>ZmHOX2a(1)   tcagacaaacccagatttaaaaaaggaaacttttcaacactctcgtcgcacaaatctacttgttcgtgaaactcactctcttcctcacagaaaagaccat  18577600               <---------ANAC58                 --------->ICU4               <---------ANAC46                 <---------YAB1              <---------WOX13(1)               <---------ANAC58            --------->ANAC58    --------->LBD16              --------->ABI4(2)            --------->ANAC58    --------->HSFB2a(2)              <-------TEIL         ------>ZmHOX2a(1)  <-----------GT1     --------->ATHB12        --------->MYB52(1)      ------>ZmHOX2a(1) <---------ARR11(3)     <---------YAB1--------------     --------->ANAC46<-----------GT1     ---------->DOF2       <---------HSFB2a(2)     <----------DOF2   caagaacacaaaacggtgcgttttgactctcttcctcctcttctaaagccatgatttttctcttccgagaagaagatgattgctaattcctttgttcatt  18577700                       --------->ZAT14                                                            ---                  --------->ARR14(2)                ---------->DOF2                               ---                  <---------GLK1(2)               --------->CCA1(2)                   ----------->GT1                  <---------ARR14(2)           ----------->GT1 *TSS      ---------->DOF2          --- ------->WRI1 <---------LBD16            ---------->DOF2      <----------ID1 ---------->DOF2    <----   ctgccattagagactctctggattcttcactctgtgtgagatagaaagagagataaaagaagtgaagacaaatgccaaagaaagtgaagggttttatttc  18577800                                                                      <-----------GT1                                                                  <---------AHL20(2)                                                                  <------------------------ANAC81                                                                 <---------YAB1                                                                <---------AHL20(2)                                                              <---------YAB1         <----------DOF2                                   --------->AHL20(1)       ------>ZmHOX2a(1)      <---------YAB1               <---------AHL20(1)     <------------------------ANAC81    <---------AHL20(2) <---------AHL20(2)    ---------->ID1         <---------YAB1                  --------->AHL20(2) ------>ANAC58             <---------AHL20(2)         --------->AHL20(2)                        ----- ------>ANAC46      <----------DOF2  <---------ARR11(3)   <---------AHL20(2)                  <------ ------>ANAC58    ---------->ID1     --------->ARR11(3)   --------->AHL20(2)      <----------DOF2 -------GT1      <-----------GT1<---------AHL20(2)    <---------AHL20(2)<-----------GT1     ---------   acgcttgtcctcttttttttttctttttttttattaaaagattttatgttttttttttaattttatttttattttctctctctgcttttattttgtcttt  18577900                 <------NtERF2                 --------->ANAC58                 --------->ANAC58                --------->ZAT18                ------>NtERF2                <---------ZAT18               <---------ANAC58         --------->SPL7                       <----------DOF2               <---------ANAC46     --------------->AtSPL3                --------->ARR11(3)               <---------ANAC58     --------------->AtSPL8          ----------->GT1              <<<<<<<<<E2Fd         <---------------AtSPL3   <---------------AGL15                 --       <---------TOE1(2)          <-----------GT1           <-----------------AGL1         <---------AHL20(2)   <---------LBD16            <---------TOE2(3)             <-----------------AG           <---------AHL20(1) ---->AHL20(2)<<<<<<<<<E2Fc --------->AHL20(2)        <---------AHL20(2)  <---------ARR11(3)<-------- ----DOF2--------->ATHB12   <---------AHL20(2)  <----------DOF2    ----------->GT1<----------DOF2  <- ->ID1 <---------TOE2(2)   --------->AHL20(2)   --------------------->WRI1--------->GLK1(2)--------->AHL20(2)   taatattcggatgtttggcgcgcgagaaaattaatgaaaccgtacttcttctttgttttattcacagaaatggaaaaatcttttcttttgtaattaattt  18578000                   <---------AHL20(2)                                                               <                   --------->AHL20(2)             --------->ARR11(3)                                <                  <---------YAB1                  <---------ARR11(3)                                <               <---------YAB1                  --------->AHL20(2)                                   <            --------->AHL20(1)                 <---------AHL20(2)               <-----------GT1     <            --------->AHL20(2)            <---------AHL20(2)           --------->ANAC55(2)          =            <---------AHL20(2)            --------->AHL20(1)           <---------ANAC55(2)          -           --------->AHL20(2)<---------ICU4   --------->AHL20(2)      --------------->AtSPL3        -        --------->AHL20(2)  <---------ATHB12  <---------AHL20(2)      --------------->AtSPL8        - ---->ZmHOX2a(1)--------->YAB1            --------->AHL20(2)          <-------TEIL                 -- -AHL20(2) <---------AHL20(2)--------->YAB1   --------->YAB1        --------->TOE2(2) =============== --------CCA1(2)--------->AHL20(2)   <---------YAB1  <----------DOF2--------->TOE1(2) ---------->DOF2   cctatctccataaattaattataaattgaaatcataactatgaattaattaaaatctttagttttaaaaacatacgtactatttacaaaaaagcttatac  18578100     <---------YAB1    <---------ANAC58    <---------ANAC58 <-------PIF4 <-------MYC3 ------->PIF4 ------->MYC3 <-------MYC2 ------->MYC4 <-------MYC4 ------->PIF5 ------->MYC2                                                --------->ARR14(1) <-------PIF5                                               --------->ARR14(2) ---------ANAC58                                   <---------ANAC58 ---------ANAC58                                   <---------ANAC58 ---------O2                                  <---------MYB46(3) ---------ANAC55(2)                         <---------MYB52(1)              <---------ANAC58 ---------TGA1a             <----------DOF2<-------GAMYB    <---------GLK1(2)                       < ======================================bZIP_DOF    <---------ANAC46  <-----------HVH21              - -------->TGA1a          --------->ANAC46 --------->MYB55(2)<---------ARR11(3)                    <-- -------->O2             --------->ANAC58 <---------MYB46(3)<---------ARR14(2)         --------->ANAC46 -------->ANAC55(2)      --------->ANAC58 --------->MYB52(2)--------->ARR11(3)       <-----------GT1< ---------->OsbHLH66 <-----------GT1    <---------MYB52(1)----------->ARR10 <---------ANAC58      <-- =========bZIP_DOF----------->GT1  ------>ZmHOX2a(2)    ---------->DOF2     <---------ANAC46<--------   tcacgtgcttattgaatgtgtagttacacgcttttgatccctgttcgttggatgcgagtaaagatactctctgttagagcgtgtgattcacgcgcttatg  18578200                                              --------->AHL20(1)                                              <---------AHL20(2)                                              <---------AHL20(1)                                             <---------AHL20(2)           <---------HSFC1(2)     --------->WRKY45    <---------MYB46(3)            ----------->HVH21   --------->ALFIN1               --------->WRKY12   <---------AtMYB61           <---------ANAC46           <----------DOF2     --------->ATHB12   <---------DEAR3(1)          <---------ANAC58     <-----------HVH21         <---------ICU4     <--- <---------MYB46(3)   <---------MYB46(3)     --------->YAB1                   --------->YAB1    xxxxx ---------AtMYB61     ----------->GT1        --------->AHL20(2)              <---------YAB1    <----- -------->ALFIN1     <---------ANAC46     --------->YAB1 <---------DAG2      --------->ICU4    <----- -------ANAC46     <---------MYB46(3)    --------->AHL20(2)              <---------------------WRI1<x ---------DEAR3(1)--------->ALFIN1--------->WRKY38(1)---------->ID1  --------->ANAC58         <------ -------bZIP60(2) <---------AtMYB61<---------WRKY18(1)<-----------GT1--------->ANAC46         ------- --DOF2    --------->HSFC1(2)  <---------ANAC58<---------YAB1        --------->ANAC58         <------   aggtggtggtggaagtttcagtggtggataaatgcgttgaccattaattatatttgtcacctttcggtttcaagcatcgatgattacaagtgaaaagatt  18578300  Previous    Next  AGI:  At3g50070.1    Description:  CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase. Identical to Cyclin-D3-3 (CYCD3-3) [Arabidopsis Thaliana] (GB:Q9SN11); similar to CYCD3,2 (CYCLIN D3,2), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G67260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71917.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59802.1); contains InterPro domain Cyclin D (InterPro:IPR015451); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (In Range:  from: 18576117    to: 18577763    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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