Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------At4g35610                                                                             <---------RAP2.3(1)                                                                             ------>NtERF2         --                                                                            <---------DEAR3(1)     <-                                                                            <---------RAP2.3(2)    <-                                                                           <---------LBD16    ------>MYB83                                                                          --------->ALFIN1    -------         <<<<<<<<<TBF1                                                  --------->ZAT2        ------>MYB46(1)     <---------ARR11(3)                            --------->At4g35610  <---------At4g35610 ------->GAMYB -->ANAC58                                         <---------STY1(2)    --------->At4g35610 <-------- -->ANAC58             --------->ARR14(2)       <---------ANAC58        <---------ZAT2     --------->ANAC46 -------->WRI1    ---------->DOF2               <---------ANAC58  --------->ZAT18    --------->At4g35610   ttcacaatttcttcttcgaataaagaaaccgcttcaaaactcttctcatggctagctaaatgaccaagtgctcgagctgcggctcgctgctcaacccaac  18558700                                                       --------->DEAR3(1)                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->RAP2.6(2)                                                       --------->DREB2C(2)                                                       ------->GAMYB  <---------ARR11(3)                                            <----------DOF2      <------NtERF2 ------>ZmHOX2a(2)                   ---------->DOF2  --------->DEAR3(2)    <---------ANAC46 ====================================HOX2a_HOX2a      --------->MYB46(3)    <---------ANAC58        - ------->ARR11(3)                  --------->ANAC58   <---------MYB55(2)    <---------ANAC58  <------ZmHOX2a(2) ----------ARR10                   --------->ANAC58  -------->P  <---------ZAT2   --------->YAB1   <- --------ARR11(3)      ---------->DOF2   --------->ARR11(3)      --------->At4g35610          ======= -->MYB52(1)        ----------->RAV1(1)  <---------ARR11(3)      <---------At4g35610    --------->TOE2(2) -MYB59     ---------->DOF2   <------ZmHOX2a(1)     --------->MYB52(1)--------->ARR11(3)--------->TOE1(2)   tgatcttccctctcaaaagctccaacaaagcaggaacaagaaagacctttgaatcaaccgccatggcagctaaatcttccttgttcataacatacgatcc  18558800           <---------ANAC55(2)           <---------ANAC46           --------->ANAC55(2)           ----------->GT1           <---------ANAC58           <---------ANAC58          <-------TEIL       <---------ZAT2       <---------At4g35610       --------->At4g35610------->TEIL       --------->ZAT2  --------->ICU4         --------->ANAC58  --------->CCA1(2) <------ZmHOX2a(1)         --------->ANAC58 -------->YAB1    <---------TOE2(3)       <---------HSFB2a(2) --------ATHB12 --------->ICU4            --------->HSFB2a(2)        <----------DOF2               -- ==========================HOX2a_HOX2a <----------DOF2            ------>ZmHOX2a(2)       <-------TEIL   aatgatatgagctgcgtaataaggaatgaatatgttctggtctttgagaagccaaacactgtttttgatcgatttatgtatgagttttgacatacactcg  18558900                                                                                                   --                                                                      --------->ANAC58            <--                       <---------ARR11(3)                             --------->ANAC46            <--                       --------->ARR14(2)                    <---------ATHB12                <-------                       <---------ARR14(2)                   --------->ANAC58                 <-------                      <------ZmHOX2a(1)                     --------->ANAC46                ---------                --------->GLK1(1)                           --------->ANAC58               <---------SPL1(1)                <---------GLK1(1)                        --------->MYB46(3)               <---------SPL7           <---------ANAC46 <-----------RAV1(2)        --------->ANAC58                   <---------SPL1(2)        ----------->HVH21 <-----------HVH21            --------->ANAC46         <----------DOF2   ---        ----------->TGA1 ------>ZmHOX2a(2)         <---------HSFB2a(2)--------->ANAC58--------------- ------->MYB46(3)  <---------LBD16 ----------->HVH21   --------->ANAC58      <---------ARR11(3)  <---   aacaaacctagtgacgggaactcaggatcgtcaggctcggacatggctatgttccacaaaccactcaagaccaagacatggtcttttgactccgtacgag  18559000                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                                <---------CCA1(2)                                              <------MYB83                                             --------->MYB46(2)                                             --------->MYB111(2)                                             <---------AtMYB61    <----------DOF2                          --------->MYB59 ------->GLK1(2)                            <--------P -------ARR14(2)                            <---------MYB55(1) -------GLK1(2)                       --------->MYB52(1) --TOE2(1)                         --------->ANAC46          --------->At4g35610 --TOE1(1)                         --------->ANAC58      <-----------RAV1(1) >SPL7   <---------YAB1            --------->ANAC58 <----------DOF2 ------>ARR14(2)             ------>ZmHOX2a(2)<------MYB46(1)<---------At4g35610       <----------DOF2 --->SPL14                 <---------ARR11(3)--------->MYB111(1)                     <---------ZAT18 ---ZmHOX2a(1)             --------->ARR11(3)<---------MYB46(3)           <------ZmHOX2a(1)    <-----   gaatctctttgaagattgcagcgagttttgatcttcgacgaaacgggttggtatctttcatgctgcagaagaaacaggatgggtttgtgcattttggttc  18559100                                                                                        <----------DOF2                         <----------DOF2                                    --------->WOX13(1)                 <<<<<<<<<TBF1      <----------DOF2                       ------------>CBF   <-------          <---------ARR11(3)       <---------ANAC58            ---------->DOF2       <---------YAB1 --TEIL <---------At4g35610        <---------ANAC58            <---------ICU4 <---------ATHB12     --   atcgaatttcagcatcttcttcttctcctttgttttggcttttggtttttcaaggagataactaataaagacattagtcaatcacttatgctttaaggcc  18559200                                                                                       --------->ALFIN1                                                                                       <------NtERF2                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                                   --------->LBD16                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                  <---------DEAR3(1)                                                                                  --------->DEAR3(1)                     <----------DOF2                                              <---------ATERF1(2)            ----------->GT1                                                 --------->ARR14(2)           <---------TOE1(3)         ----------->GT1                        <---------ARR14(2)           <---------TOE2(3)       <------------CBF                  <---------ANAC55(2)     ----------->RAV1(1)         <---------AHL20(2)             --------->WOX13(1)--------->ATERF1(2) ---ID1    --------->DAG2 <---------AtLEC2                      --------->YAB1   <---------LBD16 -------->DOF2    <-----------GT1--------->AHL20(2)          --------->TOE2(3)   --------->ATERF1(1)-   aaaaagaccacataaggttttttcttttggatgaattaattgttaattacaaacacagagaaatattaatcacataaatattcgccggcgtggaaagttt  18559300              <-----------GT1          <----------DOF2        ------>ZmHOX2a(1)     ------>NtERF2    <---------ARR14(2)    --------->ARR14(2)   <---------At4g35610   <------NtERF2   --------->ATERF1(1)  <<<<<<<<<AtERF-5  <<<<<<<<<AtERF-4  <<<<<<<<<AtERF-2  <<<<<<<<<AtERF-3  <<<<<<<<<AtERF-7  ------>NtERF2  <---------RRTF1(1)  <---------DEAR3(2)  <---------ATERF1(1)  <---------ORA47(2)  <<<<<<<<<AtERF-1  <---------RAP2.3(1)  <---------ERF1 <---------RRTF1(2) <---------RRTF1(3) <---------DREB2C(2) <---------ATERF1(2)                                       --------->YAB1 <---------ANAC58                                          <---------ICU4 <---------ANAC58                                    --------->ANAC55(2) <---------ANAC46                                    <---------ANAC55(2)         --------->YAB1 <---------RAP2.3(3)                               <-----------GT1             ------->TEIL <---------DEAR3(1)                             ----------->GT1             --------->ICU4 <---------RAP2.3(2)                          <------------CBF         --------->ANAC55(2) <---------RAP2.6(2)  <-----------GT1         <---------GLK1(2)        <---------ANAC55(2)      ----- -------->RAP2.6(3)<----------DOF2          <---------ATHB12          <---------TOE2(3)        <-----   atggcggctcctctttttagcctttaactttccacttcaagttccaaagattgttacttaataataacctataacgtaatgaatcagaatactaatattc  18559400                                     --------->ANAC58                                     --------->ANAC46                    --------------->AGL15                    <---------------AGL15                   <-----------------AGL3                   ----------------->AGL3                                               --------->ATHB12       --------->ANAC55(2)  <------MYB83                                                --------->YAB1       <---------ANAC46     <------MYB46(1)                                            --------->ICU4       <---------ANAC58    --------->MYB111(1)                                    --------->ANAC58       <---------ANAC58    <---------TOE2(3)                                      --------->ANAC58       <---------ANAC55(1) --------->MYB59                               --------->CCA1(2) <---------TOE2(3) ----------------->AGL2                               --------->ARR11(3) ---->YAB1    <----------DOF2        --------->ANAC58                   <---------ARR11(3) --TEIL<---------ANAC55(2) --------->MYB46(2)---------->DOF2--------->ANAC46    --------->MYB52(1)   atcaaggtttcgtgttctttacccaaaattaggtagaacaagaaaccaaaagggttgtgttcacacaaattcaagatatatgaaacggaatcatggacaa  18559500                                                        --------->YAB1                                                     --------->YAB1                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                   <---------YAB1                                                   --------->ICU4                                                --------->AHL20(2)                               ----                              --------->MYB52(2)<---------YAB1                ----------->HVH21  ====                            <---------MYB52(1)  <---------AHL20(2)  ----------->RAV1(1)     <--------               <---------bZIP60(1)           --------->AHL20(1)   --------->ZAT18     ---------->DOF2               --------->bZIP60(1)           <---------AHL20(1)   --------->ZAT14  --------->At4g35610      <--------P          <---------MYB46(3)--------->AHL20(2)    <---------ZAT18  <---------At4g35610   aatccatggtagttttgacatcatggtgttgttagttatagtccaaatatataattaataatcttatgtgcaccaaaatggtgacagctaaagacttttc  18559600  Previous    Next  AGI:  At3g50030.1    Description:  binding. similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G43120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71967.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) Range:  from: 18557473    to: 18559115    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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