Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->AHL20(2)                                               --------->TOE2(3)               <---------AHL20(1)                               <---------AHL20(2)    <---------AHL20(2)        --------->AHL20(1)                              <---------AHL20(1)  <---------AHL20(2)          --------->AHL20(2)                              <---------AHL20(2) --------->AHL20(2)        <---------AHL20(2)                          --------->AHL20(2)   --------->YAB1             <---------AHL20(2)                          <---------AHL20(2) <---------TOE2(3)            --------->AHL20(2)                 <---------ANAC58          --------->AHL20(2)         <---------AHL20(2)         <---                 <---------ANAC46          <---------AHL20(2)         --------->AHL20(2)  <---------TOE2(3)             --------->ZAT2   --------->AHL20(2) <---------AHL20(2)--------->TOE2(3)     <-----------GT1             --------->At4g35610          <---------AHL20(2)      ----------->GT1        --------->MYB52(1)             <---------ZAT2--------->AHL20(2)<---------YAB1      <---------TOE2(3)       xxxxxxxxxxxx             <---------At4g35610          --------->AHL20(2)   <---------AHL20(2)     --------->YAB1     ----------->GT1    --------->YAB1 <---------AHL20(2)     --------->AHL20(1)    --------->AHL20(2) ---------->DOF2 <---------ANAC58      --------->AHL20(2)     <---------AHL20(1)    <---------AHL20(2) ------------>AGL15<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->AHL20(2)  <---------AHL20(2)   ccacaaagtgtaaacagctgcttgaaaaataatttttttgttaaattaatattaattttttgaatataatgttaaattaaatatataaaaataacgtttt  18514800                                                                                --------->AHL20(1)                                                                                <---------AHL20(2)                                     --------->DAG2                             <---------AHL20(1)                                   ---------->DOF2                           --------->AHL20(2)                             ------->TEIL                                   --------->AHL20(2)           <---------ANAC46  <---------ARR11(1)                             <---------AHL20(2)       --------->ZAT18       --------->GLK1(2)                             <---------AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 --------->AHL20(2)       < --------GT1                <---------ARR14(1) --------->CCA1(2)       --------->AHL20(2)        <--- xxxxxxxxxxx>smallRNA(i2)<---------------------WRI1                    <---------AHL20(2)     <------   tacaactagtgcatcgtgtttttgaaaatcgaatctaaaaaggcagaatatatgaattgaaacacaactctatttaaattaatatatcatccaaacgtta  18514900                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                    --------->ZAT2                                  <---------ANAC58         <---------ANAC58 ----------DOF2                   <---------ANAC58         <---------AtLEC2 ------YAB1         ---------->DOF2                        <---------ANAC58                     ----- ---MYB52(1)    --------->YAB1    <---------AtLEC2--------------->AGL15       --------->YAB1    -----   tgcttttgtttctctcaaaaataaaagttctaaattgcatgatacaaaacttctctaaattgcatgatacagctagcctattacaacatgagaataccaa  18515000       --------->ZAT14       <---------ZAT18              <---------ZAT14                                    <---------MYB52(2)       <---------ZAT14 <-----------GT1   --------->ATHB12                             --------->At4g35610       --------->REM1(2)     <----------DOF2                     <----------DOF2      <---------At4g35610 ->MYB83            --------------->AtSPL8 <---------WOX13(1) <-----------GT1     --------->ALFIN1 ->MYB46(1)   <---------MYB52(1)    --------->ZAT14   --------->YAB1              <---------REM1(1)   ctatatcagtgtagtcgttttgtttttacctctttcgctaaactgattgcatccaagaatgaattaacttttactaggccagaagtgtagctaacataga  18515100                                                                                             --------                                                                                     --------->ZAT2                                                                                     <---------ZAT2                                                                                    ------>MYB83                                                                     --------->ARR11(3)    --------->ANAC58                             <---------ARR11(3)           ---------->DOF2           ------>MYB46(1)<-                 <----------DOF2           <---------ALFIN1          <---------AHL20(2)    --------->ANAC46         <---------YAB1      --------->GLK1(2)      --------->YAB1   --------->AHL20(1)    --------->ANAC58       --------->YAB1    --------->YAB1    --------->ATERF1(1)       <---------AHL20(1)  <---------ALFIN1   agaggcccattataaaactctttaaaatcaaaatctaaaacaggcccagcccattcataacaaagccctaatatatcgagtaaacctagctccactcaaa  18515200                                                                                       <---------ANAC46                                                                                      --------->ATERF1(1)                                                                                      --------->RAP2.3(1)                                                                                      <------NtERF2                                                                                     <---------DEAR4(2)                                                                                     <---------RAP2.3(1)                                                                                     <---------ERF1                                                                                     <---------ORA47(2)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                    <---------RAP2.3(2)                                                                                    <---------RAP2.3(3)                                                                                    --------->ATERF1(2)                                                                                    <---------ATERF1(2)                                                                                    <---------DEAR3(1)                                                                                    --------->DEAR3(1)            --------->TOE2(3)                                                      --------->ATERF1(1)            --------->TOE1(3)                                                      <------NtERF2      ----------->TBP                                                              <---------ABI4(1) ------>MYB46(1)   --------->ANAC58                                               ------>NtERF2------ --------->MYB52(1)--------->ANAC58                                               <---------ATERF1(1) ------>MYB83<-----------HVH21                                                    --------->LBD16 ->YAB1  <-----------GT1 --------->YAB1  *TSS                                   <---------LBD16<----- --------MYB59     <---------ALFIN1   ------>ZmHOX2a(1)         ----------->ARR10<---------LBD16   acctaactatataaccttcacacacactcataacctcttcctcatccccttaaaaaaccctaagagtagagactctctcaatcccggcggcgaagatgaa  18515300                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                              <---------ICU4                                                    <---------At4g35610 --------->ALFIN1            --------->ZAT18                         --------->ZAT2    <---------ANAC55(1)            <---------ZAT18                         --------->At4g35610 ----------->GT1            --           ----------->HVH21        <------ZmHOX2a(1)                 <---------ANAC58    ===========    ------->GAMYB          ---------->DOF2          <---------ZAT2    <---------ANAC58    ------>ZmHOX2a(1) --------->AtSPL3    --------->HSFB2a(2)        <-----------GT1       <---------ANAC46    =========== ----------AtSPL8    <---------HSFB2a(2)  <-------TEIL    ------>ZmHOX2a(1)  --------->ICU4     <----   gtacaacccaagagtgacctcttctcgcagaaagaacaggaaggctcatttcacagcttcctccagcgagaggcgtgtgataatgagctctcctctctcc  18515400                                       <---------ANAC46                                       --------->ANAC55(2)                                       <---------ANAC55(2)                             --------->REM1(2)       <-----------HVH21             <------ZmHOX2a(2)             <---------------------WRI1       <-----------TGA1             --------->ARR14(2)            <---------ANAC58    ----------->HVH21   ------>ZmHOX2a(2)                <---------ARR14(2)            --------->MYB52(2)<---------ANAC46  <------ZmHOX2a(2)            --------->AtLEC2                   <---------ANAC58  <---------O2 --------->ARR11(3)         <-------TEIL  ---------->DOF2     ------>ZmHOX2a(2)     --------->TGA1a <---------ARR11(3)        <------ZmHOX2a(2)                  <---------HSFB2a(1)   --------->O2 --------->ARR14(2)       --------->ARR14(2)                <---------ARR11(3)      <---------ANAC58 <---------ARR14(2)       --------->AGP1--------->LBD16     <---------ARR14(2)      <---------ANAC58 ------->DEAR3(1)         <---------ARR14(2)                --------->ARR14(2)      ================= ========HOX2a_HOX2a     --------->At4g35610                --------->ARR11(3)      <---------TGA1a =========HOX2a_HOX2a    <---------At4g35610   <----------ID1<------ZmHOX2a(2) --------->ANAC46 -----ALFIN1         <-----------HVH21------>ZmHOX2a(2) <-------TEIL--------------->AtSPL8   --------   accgatcttcgtcagaagtacaatgtcagatccatgccgatccgtaaagacgacgaggttcagatcgttcgtggtacttacaagggacgtgaaggcaaag  18515500                                                                           <---------TOE1(3)   <---------TOE2(3)                                                       ------->TEIL   --------->DEAR3(1)   <---------TOE1(3)                                   ----------->GT1    <---------DOF5.7(2)       -  <-----------RAV1(2)                                 --------->DAG2    --------->DOF5.7(2) <------NtERF2 ===bZIP_DOF<-----------HVH21                <---------O2             ------->GAMYB     --------->At4g35610 -->DOF2 <---------At5g28300             --------->GLK1(2)        --------->MYB46(3)    <---------At4g35610   ttgttcaggtttaccgtcgcaaatgggtgattcacatcgagagaatcacgagggagaaggtgaatggaacaaccgtgaacgttgggattcagccgtcgaa  18515600                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                      --------->At4g35610                                                                      <---------ZAT2                                                                      <---------At4g35610                                                                  --------->ALFIN1                                                                 ------->PIF5                                                                 <-------PIF5            <---------HSFB2a(1)                                 <---------ANAC46            --------->HSFB2a(1)                                 <---------bZIP60(2)            --------->ZAT2               <---------DAG2         <---------ANAC58            <---------ZAT2         <---------GLK1(1)            --------->TGA1a            --------->HSFC1(2)     --------->GLK1(1)            <---------TGA1a            <---------HSFC1(2)   <------ZmHOX2a(1)              <---------ANAC58               <-----           ------->TEIL       --------->CCA1(2)    <------ZmHOX2a(1) <-----------RAV1(1) --------->ZAT18      --------->MYB52(1) =================================================bZIP_DOF      ----------->GT1  <---------YAB1         ---------->DOF2 =================================bZIP_DOF     <------------- ---------->GT1<-------TEIL<---------YAB1<----------DOF2  --------->MYB52(1)      <------ZmHOX2a(1)   agttgtgataacgaagcttcgtcttgataaagataggaaatcgcttttggagaggaaggctaagggacgtgctgctgctgataaggagaagggtactaag  18515700  Previous    Next  AGI:  At3g49910.1    Description:  60S ribosomal protein L26 (RPL26A). Identical to 60S ribosomal protein L26-1 (RPL26A) [Arabidopsis Thaliana] (GB:P51414;GB:Q9M2W7); similar to 60S ribosomal protein L26 (RPL26B) [Arabidopsis thaliana] (TAIR:AT5G67510.1); similar to unknown [Populus trichocarpa] (GB:ABK93553.1); contains InterPro domain Ribosomal protein L24, SH3-like (InterPro:IPR014723); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Ribosomal protein L26, eukaryotic/archaeal; (InterPro:IPR005756); contains InterPro domain KOW (InterPro:IPR005824); contains InterPro domain Ribosomal protein L24/L26, conserved site; (Inter Range:  from: 18515241    to: 18515952    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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