Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->YAB1                       --------->AHL20(2)                   <---------YAB1                      --------->AHL20(2)                   --------->ARR11(3)                   <---------AHL20(2)                     --------->CCA1(1)              <---------AHL20(2)                      --------->AHL20(2)                        -----              --------->AHL20(2)                     --------->YAB1             --------->AHL20(1)             --------->ICU4                         --------->AHL20(2)          <---------AHL20(2)        ----------->GT1<---------AHL20(2)       --------->AHL20(2)    ----------->GT1          <-----  <---------ATHB12--------->AHL20(2)     --------->AHL20(2)<---------ARR11(3)   --------->AHL20(2)  --------->ICU4  <---------AHL20(2)     --------->YAB1   --------->RVE1(1)    --------->AHL20(2)   tgcaataaatgtgtaattttttaaatttataacaaatatacaattaaaaatcaaataaaaatatcatagtttttgttaaaaaaaaattgttttttttatg  18513200                                                          ----------->RAV1(1)                                                          <---------ALFIN1                                                          =============================RAV                         --------->ANAC55(2)           ------>NtERF2                             ----                         <---------ANAC55(2)  <---------HSFB2a(1)                                <---        XXXXXXXXXXXXXXXXXXXX>MIR829.2         --------->HSFC1(2)                             -------- ---->YAB1       ----------->GT1              --------->HSFB2a(1)                   <---------ZAT6--- ----YAB1  ---------->DOF2  <-----------GT1   <---------HSFC1(2)           <-----------RAV1(2) ------   aaaattgacaaataaaagcttgaaaatatgtaaccttgtgaagatggaaccttgtgcctcccacatttacgaatacatcaggtttagagttattagccaa  18513300                                                          <---------ARR11(3)                  -------                                                          <---------GLK1(2)                   <------MYB46(1)                                                      ---------->DOF2                        --------                                                   <------MYB46(1)                         --------->ARR14(1)                                                   ----------->GT1                         --------->CCA1(2)                                             <---------YAB1                               --------->ARR11(1)          --------->AHL20(2)                <---------AHL20(1)                            <---------ARR14(2)        --------->AHL20(2)                  <---------AHL20(2)                            --------->ARR14(2)       --------->YAB1                       --------->AHL20(2)                            --------->ARR11(3) ----->MYB46(3)          --------->ANAC46   --------->AHL20(1)                          ----------->ARR10 ------MYB55(2)          --------->ANAC58  --------->YAB1 --------->ARR11(3)            --------->ICU4 ->MYB46(3)              --------->ANAC58 --------->ICU4--------->ICU4                ---------->DOF2 ---->GAMYB       XXXXXXXXXXXXXXXXXXXX>MIR835-3P   <------MYB83                    ----------->GT1 --->MYB52(1)  ----------->GT1   ---------->DOF2  --------->MYB59           --------->AHL20(2)<------MYB83   cgacctgaataaaaatatagaaaaaacacccaaaaaaaagagaaattataatttggtaaagatttttctaccaaaaaaaaaaatgtggtaaagatttggt  18513400                    <---------------AGL15                    --------------->AGL15                   ----------------->AGL1                   ----------------->AGL3                   <---------YAB1     <-------TEIL                   <-----------------AGL1                   ----------------->AG                   <-----------------AGL3                                           <------ZmHOX2a(1)                   ----------------->AGL2                                 <------MYB46(1)                   <-----------------AGL2                             --------->ATHB12         ------ ---->GT1        <-----------GT1     --------->GLK1(2)              <---------WOX13(1)     <--------- ->MYB59      <---------ICU4         --------->CCA1(2)<------ZmHOX2a(1)   <------MYB83 ---------->DOF2   aaattttctaagagaaacattaccatttatggactcgagattcaagctccattgaaggagaagaagagagattgataggttgtttaggagaaagagacaa  18513500                                           <---------ZAT6                                      --------->ANAC46                ---------->DOF2    ------>ZmHOX2a(2)        >>>>>>>>>TBF1            <---------ARR11(3)                  ------->GAMYB ---->DOF2    --------->ARR11(3) --------->ARR11(3)                 <---------MYB52(2)             <- -ID1>>>>>>>>>TBF1               <-----------ARR10                  --------->MYB46(3)     <---------   agatgaagaagaagaagataaagaagaagagtgatgatctacgtagtcttcgtcttcataaatcgtatcaacaaaccctaagtttgtccatcgcttcatg  18513600                                                                         <--------P                                                                       <---------MYB46(3)                                                                       <---------DEAR3(2)                                                                      <---------TOE1(2)                                                                      <---------TOE2(2)                                                                     <---------LBD16                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                            <-------TEIL<-------GAMYB                                                           --------->CCA1(2)                                                           --------->ARR14(1)                                                         <---------HSFC1(2)--------->MYB59                                                         --------->HSFC1(2)<---------AtMYB61                                    --------->ATHB51     --------->HSFB2a(1)                                    <---------AHL20(2)   <---------HSFB2a(1)                     <------ZmHOX2a(2)    <---------ANAC58--------->ARR11(1)            <---------------------WRI1    <---------ANAC58--------->ARR14(2)<------MYB46(1) ---------DOF2      <---------ARR11(3)    <---------ANAC46<---------ARR14(2)<------MYB83 -DOF2  --------->LBD16       --------->YAB1            ----------->ARR10<---------MYB52(1)       ---   tctttttttccgagagagaagagatcaaagaatgagaataatttgtgtgagttttgagaagattcgaattcgccggttaggttttagtatcaagaagaga  18513700                                                                                        --------->LBD16                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                             <---------YAB1                                                                             <---------MYB52(1)                                                               --------->ARR14(2) <---------AHL20(2)                                                               <---------ARR14(2)--------->AHL20(2)                                                              ====================HOX2a_HOX2a      --                                                     ------->TEIL           <-------GAMYB          --                        --------->ICU4         <---------AHL20(2)          ----------->GT1 ----------                        <---------ATHB12      --------->AHL20(2)           ------>ZmHOX2a(2)       <-            --------->At5g28300               <---------AHL20(2)       <---------YAB1  <---------ANAC46 -------->GT1       ------------>CBF    ----------->GT1       <------ZmHOX2a(1) <---------YAB1   <---   aggaaattttggacagtgaatgggcaataaatgtgagtaatatgggaaataaatgaatttaagaggatttgttgtgatcgttattatatgcgtgaaagtc  18513800                                                                <-------MYC3                                                                ------->MYC3                                                             <---------ALFIN1                                                         ------->PIF5                                                         <-------PIF5                                                         <-----------HVH21                                                        --------->O2                                                        --------->ANAC58                                                        --------->TGA1a                                                        --------->ANAC46           ---------->ID1                               <---------O2           <-----------GT1                              --------->ANAC58     <---------ANAC58                                   --------->bZIP60(2)     <---------ANAC58                                   <---------TGA1a --------->TBP<---------DAG2                          <---------ALFIN1 ------->AHL20(2)                                  <---------TCP16(1) >DOF2    <-----------GT1                          --------->PCF2                   <-------TEIL --------AHL20(2)                                  <---------PCF5               <-------TEIL -------DOF2  <----------DOF2                      <---------PCF2               ------->TEIL   tttaaatgcgtttttcctttttcttcaccataaaccttctagttcatatagagggaccacgtcccacatgttctccaaaatgtacattcgttctaacatt  18513900                         <---------AHL20(2)                                           <----------DOF2                   <---------TOE1(3)                                               <-----------GT1                   --------->MYB59                                                <<<<<<<<<<GT-3b           --------->GLK1(1)    <---------At4g35610                             <---------YAB1          <---------ARR11(3)    --------->At4g35610                        ----------->GT1      --------->ANAC46  --------->AHL20(2)   <---------ANAC46             ------>ZmHOX2a(2)   <------    <-----------GT1<---------TOE2(3)       <---------ANAC46   <---------ZAT6 <---------MYB52(1)   caaatttcacgagatttcatttaggtttaaattgagcttaaattgttgtgtatatatagtactagtgcaagtttgatcggttatttttctttactaattg  18514000                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                   --------->AtMYB61                                                                 ----------->RAV1(1)                                                                ------->GAMYB                                                                --------->AtMYB61                                                               --------->MYB46(3)                                                               <---------MYB111(2)                                                               <---------MYB55(2)                                                              ------>MYB46(1)                                                              ------>MYB83                                                              -------->P                                                             --------->MYB55(1)                                                            --------->AtMYB61                                                            <------------AtMYB84                                                            --------->DEAR3(1)             ----------->GT1                                <---------MYB111(2)        <-------GAMYB                                       <---------MYB111(1)      ---------->ID1                                        <---------MYB46(2)  <---------ANAC58                                          <---------MYB55(2)               --------  <---------ANAC58               <---------AHL20(2)         --------->MYB46(3)          ------>ZmHOX2a(2) ---WOX13(1) <---------ANAC46----------->GT1     --------------------->WRI1         <---------YAB1   acatacttgtcgttgtcgtaaaaaacatggattgtttatttgtttatatcaatttgtttgcaccaaccaccacaagaaaattagttttgatcggccagtt  18514100  Previous    Next  AGI:  At3g49900.1    Description:  BTB/POZ domain-containing protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75904.1); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 18511620    to: 18513599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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