Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------WRKY18(1)                                                          --------->WRKY38(1)                                                          --------->WRKY12                                                          --------->WRKY45                                                  --------->GLK1(2)         --------->YAB1                      <---------LBD16 --------->MYB46(3)        <---------YAB1                       <---------At4g35610        <---------ATHB12                ------->MYC3     <---------WOX13(1)        <<<<<<<<<ARR2                   <-------MYC3    <---------ANAC58           <---------WOX13(1)        <<<<<<<<<ARR1                   <-------MYC2    <-------GAMYB  ------>ZmHOX2a(2) ----->ZmHOX2a(1)                    <---------ALFIN1   <---------ANAC58         --------->ATHB12 --->ZmHOX2a(2)                <---------ANAC58  <---------GLK1(2)    <------ZmHOX2a(2) ---ZmHOX2a(2)                 <---------ANAC58  <---------ARR14(2)  --------->ARR11(3) ---->ARR11(3)                 <---------HSFB2a(1)<---------ARR14(2) <---------ARR14(2) -----ARR11(3)         ----------->RAV1(1)   --------->At4g35610     <---------ARR11(3) ---->ARR14(2)        ----------->HVH21 ------->MYC2   <---------MYB46(3)       <---------YAB1  <---- -----ARR14(2)  ---------->DOF2--------->HSFB2a(1)--------->ARR14(2) --------->ARR14(2)----------->RAV1(1)   tccttacacaatcatagaaacagcgcgacagtaacgttcccacatgcagcggaatcttggttgaccaccaagatcccatagtctgattgcaacattttct  18502800          ------>ZmHOX2a(1)                    <-----------ARR10     <----------DOF2                           --------->GLK1(2)  <-----------GT1                              ------->TEIL     --------->HSFB2a(2)                <- ---------->ID1                        ---------->DOF2          <---------HSFB2a(2)                -- ------DOF2       <-----------GT1   ----------->RAV1(1) <-----------RAV1(1)              ------>ZmHOX2a(2)   tttgtcactttcctcatgttaaacccgacctgataaacccacaaagacgaatctcttcatgttgttccaaaaaaaaaaaacaggttttggatcgaaaacc  18502900                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                               ------                              <---------SPL7 --------->ZAT14                      <---------ICU4<----                       <---------ICU4        <---------ZAT14                     --------->ICU4------               <---------ANAC46              <---------REM1(2)                   <---------YAB1------             <-------TEIL  <---------At5g28300    --------->ZAT14    --------->ANAC58  <---------CCA1(2)       ---------->DOF2--------->ICU4  <---------ICU4                 ----------->GT1<---------YAB1  - --------ARR14(2)----------->GT1      --------->YAB1                 --------->ANAC58--------->AHL20(2) ------->ARR14(2)<---------ZAT6   <------ZmHOX2a(1)    <-----------GT1    ---------->DOF2  --------->ANAC46   gtatttgatcaaagatgcagtgtaacaattaccgtaggaatcatgtcttcactgtattcaccagtctaaacaagtaaaaagacatcattatatccccaac  18503000   --------->YAB1 --->GAMYB ----->AtMYB61 ---->MYB46(3) -----MYB111(2) >MYB46(1)                                               ----------->RAV1(1)                     ---- -----MYB55(2)            --------->YAB1   <---------ZAT18                                       ---- >MYB83        ---------->DOF2       --------->YAB1   ----------->RAV1(1)   <----------DOF2      ---- -->P      <---------ZAT6<---------YAB1    <---------ZAT14  --------->TOE1(3)    --------->LBD16----- -------->AtMYB61    <---------GLK1(2)     --------->ZAT14  --------->TOE2(3)    ------>ZmHOX2a(1)  -   caccatcatataagtgttaaagagattatcaaaatggaagcatagtatacttactgcaacaacattaacaagtgatgtctttcctgaattttgaagtcct  18503100    ---------->DOF2   <---------ANAC58               ==================================HOX2a_HOX2a -->MYB83             <---------ANAC46               ------>ZmHOX2a(2) ---->P--------->At4g35610                           ===============================HOX2a_HOX2a -->MYB46(1)          <---------ANAC58        --------->ICU4  *TSS<---------ATHB12     <-----------HVH21 ->ZmHOX2a(1)         <---------AtLEC2 ---------->DOF2    <---------MYB52(2) ------>ZmHOX2a(1)------- --------->DOF2  <----------DOF2     <------NtERF2  <---------------------WRI1  ------>ZmHOX2a(1)   accaaagaaagctccatttcttttgcttgaagattaggctgcaaagtcatattgatcgaaacaaacaaatgaataggtcctcctcaaaatgtcaactaag  18503200                                                <---------AHL20(2)                                               <---------AHL20(2)                                      --------->GLK1(2)                                      --------->ARR14(2)                                      <---------ARR11(1)                                    <--------                    <------------CBF  ------->TEIL                                          ---------          <---------ZAT14             <---------ARR14(2)                       <----------DOF2          --------->ZAT14      <---------At5g28300                             <---------DAG2    <---          <---------ZAT18     <-----------GT1  --------->AHL20(2)     --------->ANAC58     --------->MYB52(2)          --------->ZAT18 <----------DOF2   --------->YAB1            --------->ANAC58   <---------MYB52(1) -->MYB52(1)      --------->ARR11(3) <---------ARR14(1)          <---------TOE2(3) <---------YAB1<---   agaagaagagagagcactaagttattgtctttttacagcgaatctataattttatatttagatagttgaggcaagtagctactttatttttgttagctac  18503300                                              <---------ZAT6                             <---------HSFB2a(2) <---------YAB1                 --------->CCA1(2)                                <---------MYB52(1) -At4g35610                     --------->GLK1(1)                               <-------GAMYB >At4g35610                    --------->ARR14(2)                           --------->ANAC58 -------DOF2 <---------ARR11(3)<---------ARR14(2)                    ------>ZmHOX2a(1)   --------->HSFB2a(2) ------DAG2  --------->ARR11(3)--------->ARR11(3)           <-----------GT1 --------->ANAC58 --------   tttatatttgttcgatatctagtttctatttcagatatacaataaccagagttaagagtttatttctcttcctacagaacgccgttgattttcagaagta  18503400  <---------AHL20(2) --------->AHL20(2) <---------AHL20(2)                      ---------->DOF2                                            < --->GT1                           <---------ICU4      ----------->GT1           ---------->DOF2 <---   aaattttttttgggacacttatgtttttgtgtttcaaaaattgcaaagccttgggaatagaaaaacaatccacatctaatatacaaagacaagactggag  18503500                                 --------->ANAC58                                 --------->ANAC58                           <------ZmHOX2a(1)                                            --------->YAB1                    --------->At4g35610                                                 <---------ICU4  ------>MYB83   --------->At4g35610    <----------ID1                         <-----------GT1  ------>MYB46(1)<---------At4g35610    ----------->GT1             --------->ANAC46   <---------YAB1 ---------MYB59  --------->ZAT2--------->CCA1(2)---------->DOF2     --------->ANAC58 --------->YAB1 ---ZmHOX2a(1)  ----------->RAV1(1)   ----------->GT1               --------->ANAC58 <---------ICU4   gaccaaacaagaccagaccagcagaagaaggagagacggaaggcgaaaaataaagacactcttgtttcacacgaaaaattgtcaccatcatcatcaacta  18503600                                                                                                <----                                                                                         <---------ATHB12                                                                                       --------->WOX13(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                             <----------DOF2    <----                     --------->GLK1(2)              --------->ICU4           <---------DAG2  <-------       <------ZmHOX2a(1)           --------->GLK1(2)<---------YAB1  <----------DOF2--------->ANAC46   gacaatacaggaagactaagaagaatcaagaagagagaatatatgttcttggtgaagattagttcttcgactttgaatgctttacgagccaatcaatgac  18503700  Previous    Next  AGI:  At3g49860.1    Description:  ATARLA1B (ADP-ribosylation factor-like A1B); GTP binding. similar to ATARLA1C (ADP-ribosylation factor-like A1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G49870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83936.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras small GTPase, Ras type; (InterPro:IPR0 Range:  from: 18502107    to: 18503162    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g49870.1    Description:  ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding. similar to ATARLA1D (ADP-ribosylation factor-like A1D), GTP binding [Arabidopsis thaliana] (TAIR:AT5G67560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83936.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689) Range:  from: 18503393    to: 18505124    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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