Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ANAC58                                                         ---------->DOF2                                                   <---------ZAT2   <---------CCA1(2)    --------->MYB52(1)              ----------->GT1--------->At4g35610 ------->YAB1                --------------->AGL15 --------->ZAT2  ------->TEIL           --------->TOE2(3) ------->AHL20(2)  --------->HSFB2a(2)             <---------At4g35610  <----------DOF2  ----------->GT1 ->TOE2(3) <----------DOF2  <-----------------AG --------->ZAT18--------->ANAC58  ---------->DOF2   ataaaaaaacagacttttcttctcaaactcacaacatttgggaaaataatgtgagctgaaaaagaaacgcatgtctttatctcagaaagaagcgttaaaa  18487400                                                                     <-----------HVH21                                                                     --------->At5g28300                                          <----------DOF2           ----------->GT1                                ---------->ID1              <----------DOF2                       <<<<<<<<<TBF1 <----------DOF2     <-----------GT1                    <<<<<<<<<TBF1  ------>ZmHOX2a(1)    ---------->ID1    ---------->DOF2       ----------->RAV1(1)      <-----------GT1        <-----------GT1--------->WRKY18(1)          --      --------->MYB46(3)    <----------DOF2 <---------AHL20(2)      ------->GAMYB  <-------TEIL------   caacaacaacaacacaatcttcttcttcttctttttcctctttgctttaatttagtttttctcttttcaacggtcaaaaagaagattcattcaactcttg  18487500                                   <---------ZAT2                                  --------->MYB52(1)                         --------->HSFB2a(2)                                  ------>MYB83                               --------->HSFC1(1)                                  ------>MYB46(1)                            <---------HSFC1(1)            --------->YAB1      <---------MYB59                    ------->GAMYB                    -       <-----------GT1         --------->ANAC58                   --------->MYB46(3)                <  --------->YAB1               --------->ANAC58                 <-----------GT1                    --  <---------AHL20(2)   --------->ATHB12                     <---------AHL20(2)            --------->DAG2  --------->AHL20(2)  --------->ICU4                ----------->GT1--------->TOE2(3)     ---------->DOF2 ------->YAB1         <---------YAB1  --------->At4g35610  --------->AHL20(2)<---------HSFB2a(2)<---- ----->GT1 <---------YAB1<---------WOX13(1)     --------->AHL20(2)<----------ID1    ----------->GT1<-   ttaataatataacatcataaacacatgattgaaacccaactgctcccaaaaaaaatgtgaattttataaccacaaatttcgagaaacagaaaaaaggagg  18487600          --------->YAB1          <---------ICU4         --------->ICU4                                                               ----------->GT1       --------->YAB1                    ------->TEIL                              ---------->DOF2 -------->YAB1                         ------->GAMYB                           --------->TOE2(3) ---------ICU4                        <---------MYB52(2)                     <---------ARR11(3) ------->ICU4                         --------->MYB46(3)                     --------->ARR11(3) --ZmHOX2a(1)--------->YAB1         --------->MYB52(1)        <----------DOF2--------->GLK1(2) --------ATHB12               --------->AHL20(2)    <---------TOE2(3)  <---------HSFB2a(2)  ---------   aatcatgaagaataatgagaaggaaaccaaaaaaaaatcaacgaacccagtacaaaggtttgaactttcaataccagaaaatctcaaaagataaaaaagg  18487700                                                 <---------ANAC58                                              <---------ARR14(2)                                           --------->ANAC46                                    --------->AHL20(2)                                    <---------AHL20(2)                                    <---------AHL20(1)                                   --------->AHL20(2)                                 --------->YAB1  <---------ANAC58                   <----------DOF2                    ----------->HVH21      --------->ANAC58                 --------->SPL7                  <---------At4g35610      --------->ANAC58             --------------->AtSPL3                  --------->At4g35610    <-----------GT1                --------------->AtSPL8                <-----------RAV1(2)<---------AHL20(2)                <---------GLK1(1)   ------------   --------->GLK1(2)----------->TGA1--------->AHL20(1)   ----------->TGA1   --------->ZAT14    ------ ->DOF2      ------------------------>ANAC81  --------->ARR14(2) >>>>>>>>>TBF1    <------------------   aagagaatttgagaaaacccagatgacgaaatcaaaaataaattcacgaattcgtgagaatgacgaagaagaaacccgtactctctcttttgtttgtttg  18487800                                                                                      ---------->DOF2                                <------------CBF                        <---------ANAC58        -----                               --------->ATHB12                         <---------ANAC46   ----------                        <---------ANAC46                   <------ZmHOX2a(1)   <---------AHL20(2) ---                   *TSS <---------ZAT6                    ----------->GT1      --------->AHL20(2)---- --------->WRI1   <---------TOE2(3)                <----------DOF2      <---------ANAC58 ----------->GT1 --->MYB52(2) <---------At4g35610              ---------->ID1    --------->AHL20(2)--------->AHL20(2) ------ANAC81 ----------->RAV1(2)<---------WOX13(1)--------------->AGL15----------->GT1  <----------ID1   tttctctcttaccttcttctgaggtagtgtgagtgattgttttgtttttgtttctttgagaggaaaaaaaaatggggtgaataaaataaaaaggagaaaa  18487900                                       <---------ARR11(3)                                       --------->ARR11(3)                               <---------ANAC46               ----------->HVH21                             <---------ANAC46              --------->DAG2                           --------->ARR14(1)              <---------TOE2(3)                           --------->GLK1(2)           --------->YAB1                           --------->CCA1(2)         <---------TOE2(3)                          --------->ARR14(2)        ---------->DOF2                          <---------ARR14(2)   --------->AHL20(1)                          <---------GLK1(2)    --------->AHL20(2)                          --------->ARR11(1)   <---------AHL20(2)                 <---------MYB46(3)    --------->GLK1(2) --------->CCA1(2) ----->DOF2   <---------ARR11(3)  ----------->GT1  --------->AHL20(2) ->GT1    ---------->DOF2<---------HSFB2a(1)  <---------AHL20(2)    --------->At5g28300             < ------>DAG2  --------->ARR11(3) --------->ALFIN1  <---------AHL20(2)      <-----------GT1<---------MYB52(1) ----->DAG2<---------TOE2(3)<-------TEIL      --------->AHL20(2)   ----------->GT1        <----------   aaggggagagattaaagatttgttgaaagattcgggtggaaaatctaaaaaaattaaagataaggtgaccggtgaattcactggttatagccggtcattt  18488000                           --------->ANAC58                           --------->ANAC58                      <-------MYC2                      ------->MYC4                      ------->PIF4                      ------->MYC3                      <-------PIF5            --------->ANAC58                      <-------MYC3            --------->ANAC58         --------->YAB1                      ------->PIF5          <---------ANAC58          <---------YAB1                      <-------MYC4          <---------ANAC58         --------->AHL20(2)                      <-------PIF4      <-----------HVH21            <---------AHL20(1)                      ------->MYC2     --------->O2                  <---------AHL20(2)                     <---------TGA1a   <---------TGA1a      --------->LBD16                     --------->O2      --------->TGA1a     --------->LBD16                     <---------O2      <---------O2      ------>MYB83--------->AHL20(1)                     --------->TGA1a  <-------MYC3       --------->MYB52(1)                    ------------>OsbHLH66----------->HVH21<---------LBD16                 <---------ALFIN1 --------->ANAC46       ------>MYB46(1)             <---------SPL7--------->ANAC46 <---------bZIP60(2)    <---------YAB1            <---------ANAC58    <---------ALFIN1       --------->DEAR3(1)                     <------      XXXXXXXXXXXXXXXXXXXX>MIR851-5P  ------->MYC3     --------->AtMYB61                    <--------  ------>ZmHOX2a(1)<---------ALFIN1<---------ALFIN1   --------->At4g35610               <---------AHL20(2) ---------ZAT18--------->SPL7   --------->REM1(1)     <---------At4g35610<-----------GT1--------->AHL20(2) -HVH21     <---------ANAC58    --------->ANAC46    <---------ALFIN1--------->YAB1 <----------DOF2   agtcctctcgactcgcgtaccacacgtgcaagctacaccacatgtgacatgccctcacctcccggttttattataatacaactctcttttttaattacca  18488100                     <---------YAB1                                    --------->MYB59                  --------->ICU4               --------->YAB1     --------->AHL20(1)                <---------AHL20(2)          <----------DOF2       <---------AHL20(1)                --------->YAB1             --------------->AGL15  <---------AHL20(2) --------->KAN4(2)                --------->AHL20(2)         <---------------AGL15  --------->AHL20(2)<---------HSFB2a(1)                <--------ATHB1             <---------DAG2   ----------->GT1   ------->GAMYB                <---------ICU4            ----------------->AGL3<-----------------AGL1                <---------AHL20(1)       -------->P         --------->ANAC55(2)     --------->HSFB2a(1)               --------->ICU4           <---------ALFIN1    <---------ANAC55(2) --------->ANAC58         <---------At4g35610         --------------->AtSPL8 --------->ANAC55(1) --------->ANAC58   --         --------->ZAT2 <---------GLK1(1)------>MYB83       --------->ANAC46 --------->MYB46(3) ----- ---YAB1 <---------ZAT2 --------->GLK1(1)------>MYB46(1)    --------->ANAC58--------->ANAC58   <----- ---GT1  --------->At4g35610        ---------->ID1          --------->ANAC58--------->ANAC58   <-----   ttgaaaaactcagcttaataattttgatttccaattttgtccctaccttttatagttttaaaacgtaattaattaggcaaccaagaaaattctcccaata  18488200                                                                                 <-----------GT1                                                                              <---------KAN4(2)       ----------->GT1                                                     ----------->GT1 -------->DOF2                                                          --------->ALFIN1 ---->YAB1                                                           --------->DAG2 ----ATHB12             <---------ICU4       <------ZmHOX2a(1)      ---------->DOF2 ----ATHB51     <-----------GT1       --------->AHL20(2)           <---------ATHB12   <----------DOF2   ataaagaattagtaattttaaacacattatttcagtcaaattatacaggagatgtaattgttccttccaataaagtgtggaataaacactttggtatgtg  18488300  Previous    Next  AGI:  At3g49810.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G65920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17685.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 18485522    to: 18487819    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version