Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                -----                                                                                                -----                                                                                                -----                                                        --------->LBD16                       -------                                                      <---------LBD16                         ------>MYB83                                                      ------>ZmHOX2a(2)                       ------>MYB46(1)                                      --------->YAB1 <------ZmHOX2a(2)                       --------           <---------YAB1  <---------At5g28300      <---------ARR14(2)                      <--------          --------->ARR11(3)  --------->TOE1(2)     --------->ARR14(2)                      <--------          <-----------GT1 <-----------GT1         --------->LBD16                           <-------- ----DOF2 <---------ARR11(3)  <---------LBD16   ----------------->AGL1                      <-------- -------AGL15    <---------YAB1--------->LBD16<-----------GT1             <---------MYB52(1)--------- ------>AGL15<----------DOF2 ----------->RAV1(2)<---------LBD16<---------GLK1(2)           <---------At4g35610   agagtaatgtattatctttcttattgttttaccctgggattaataagtttaccggatccggagtagaatttcttcggtttggcaattttgttcacctacc  18438300                                                                                                <----         <-----------GT1                                                                       <-----      <----------DOF2                                                                          ------  ------->GAMYB                                                                                ------ <---------MYB52(2)                                                                            <----- ------->MYB52(1)                                                                              <----- ---->TOE1(3)                                                                            --------->ANAC55(2) ---->TOE2(3)                                                                     --------->CCA1(2) ---->YAB1                                                                        <------ZmHOX2a(2) ->P------->TEIL                                <----------DOF2                  --------->AGP1------ ->MYB55(1)                               <-------TEIL                           --------->ARR11(3) -MYB46(2)                            <-----------RAV1(1)       ---------->DOF2  --------->ARR14(2) - -MYB111(2)                        <----------DOF2           ------->GAMYB   ---------->DOF2--------- -MYB111(1)                        <---------DAG2          --------->At4g35610   <---------ARR14(2) < -MYB55(2)       <---------YAB1<-----------------AGL2      <---------At4g35610   <---------ARR11(3)-- >MYB46(3)<-----------GT1   --------->WOX13(1)  ------>ZmHOX2a(1)       ----------->GT1  <---------ANAC55(2)   ataacgaacttttacccttatacttagtttcaatctacttttggtgcatcctttcattttcaactgcaaagaagtagttaaaagatccaatacataatat  18438400            --------->ANAC55(2)            --------->ANAC58            --------->ANAC58        --------->YAB1       <---------YAB1    <---------AHL20(2)    --------->AHL20(2) -----AHL20(2) ----ARR11(3) --->ARR11(3) --->AHL20(1) ----AHL20(1)                                                       --------->HSFB2a(2) ----AHL20(2)                                                       <---------HSFB2a(2) --->AHL20(2)                                         <---------ANAC55(2) -------->AHL20(2)                         <---------DAG2------->TEIL--------->LBD16 >AHL20(2)  --------->ANAC46 ---------->DOF2    --------->AHL20(2) <---------LBD16 ----------->GT1 ---------AHL20(2)       ---------->DOF2   <----------DOF2      <---------GLK1(1)---------->DOF2 ------->AHL20(2)     <---------ZAT6---------->DOF2   --------->ANAC55(2)   ---------->DOF2   atttaatttatcataagtaacttagtgtaaagaaagactaaagtactttttaaaatatgtatttgtatttcccgatgtgaaagaaaagaaaattgaattt  18438500                                                       <---------ANAC58                                                       <---------ANAC55(1)                                                       <---------ANAC58                     <------ZmHOX2a(1)                 <---------ANAC46    <-----------ARR10                    ----------->GT1          ----------->HVH21            <---------CCA1(2)                <---------STY1(2)          <----------DOF2               ------>ZmHOX2a(1)          --------->AHL20(1)          --------->HSFC1(2)                <---------ANAC58         --------->AHL20(2)           <---------HSFB2a(1)               <---------ANAC58         --------->YAB1               <---------HSFC1(2)                --------->TOE2(3)  --------->TOE2(3)        <---------ATHB12              --------->HSFB2a(1)   --------->ZAT18<---------ARR11(3)   gcacatatcaataatattagctaggaaaaaacttgtgagaaatttctttgacgacttgcgtgtgcaatagtcttccttatcttctctaccatttcttaat  18438600                                               <---------AHL20(2)                                      --------->AHL20(2)                                  <---------AHL20(1)                                  --------->AHL20(1)                                          <------                              <---------AHL20(2)                                          <---------YAB1                              --------->AHL20(2)                  <----------DOF2         <---------AHL20(2)                <---------AHL20(2)--------->AHL20(2)           <-----------GT1           <---------AHL20(2)                <-----------GT1   <---------AHL20(2)      ---------->DOF2            --------------->AGL15          ----------->GT1    --------->AHL20(2)--------->AHL20(2) <---------DAG2  <-----------GT1   <   tccactattgtatagtatttacttatgttgaattaataaattaaaacatttaaatttccctaaagttactttttgatttttgattttctatttttattac  18438700                    *TSS                                     <---------AHL20(2)                   <----------DOF2                          --------->AHL20(2)                --------->ARR11(3)                          --------->YAB1        <---------DAG2                     --------->At4g35610          <------------------------ANAC81        <----------DOF2                    <---------At4g35610          <---------DAG2            <--     ------>ZmHOX2a(1)                 <-----------GT1     <---------YAB1      <----------DOF2  <---- -----GT1    <-----------GT1      <---------DAG2       <---------At4g35610  <-----------GT1 --------- ----------DOF2 <---------ARR11(3)<----------DOF2 --------->ANAC46      <----------DOF2     ---------   aactttcctactttttgacatcttttcttacaaagactttttgacatctccccctccagctattatatagtctccttttttcttttctgcattcacataa  18438800                                           <---------AHL20(2)                                    ------>MYB46(1)                                    ------>MYB83                                  --------->AtMYB61    --------------->AGL15       ------>MYB83 --------->ARR11(3)    <---------------AGL15       ------>MYB46(1)<---------ICU4 <-----------GT1               --------->ANAC46--------->YAB1              --------->At4g35610 -------ICU4                  --------->MYB46(3)                           <---------At4g35610 -----AHL20(1)                <---------MYB55(2)     --------->YAB1       --------->RAP2.6(2) >ANAC55(2)        --------->ANAC46----------->RAV1(1)      ----------->GT1<------NtERF2 >ANAC46         --------->ANAC46--------->MYB46(3) <---------YAB1       --------->ZAT18   tatttcccctatatagtttacacaacatcatacccaccaacatatataatcttgatcatagagagataaacagaggccgctatcaagaacaagactaaga  18438900                                                --------->ANAC58                        <-------TEIL                                          ----------->HVH21                          --------->At4g35610                                        ----------->GT1                           <------ZmHOX2a(1)            <------ZmHOX2a(1)         --------->REM1(2)                       ------>ZmHOX2a(1)     --------->ZAT18               <---------ANAC46                         --------->At4g35610     --------->ZAT14           --------->ZAT18---------->DOF2---------->DOF2----------->RAV1(2)     <---------ZAT14           <---------ABI4(2)--------->ANAC58            <---------At4g35610   <--   acaagacttcactaggagtacaagtatgggaagagcaccgtgttgtgacaaagcaaacgtgaagaaagggccttggtctcctgaggaagatgcaaaactc  18439000                            <------NtERF2                           --------->ANAC58                      <---------At4g35610                         --------->AHL20(2)                      <------NtERF2                               <---------AHL20(2)                      --------->At4g35610                         --------->AHL20(1)                      <---------LBD16                    <------MYB46(1)                     ------>NtERF2                   --------->ATHB12 <---------AHL20(2)                    <---------PCF2                ---------->DOF2 <---------AHL20(1)       --------->AHL20(2)         --------->YAB1    --------->ANAC58   --------->TOE2(3)--------->YAB1     <----------DOF2   <        ----------->GT1 --------->LBD16  <----------DOF2 <------MYB83--------->AHL20(2)    <---------AHL20(2) -------CCA1(2)    <---------ABI4(2)  ------>ZmHOX2a(2)  ----------->GT1     <-----------GT1 <-------   aaatcttacattgaaaatagtggcaccggaggcaattggatcgctttgcctcaaaagattggtattaataaatttatagtcactctttttcatataaatt  18439100                                                                                            ---------                                                                                           <---------TOE2(3)                                                                                           <---------TOE1(3)                                                                                  <-------GAMYB                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                 <---------MYB46(3)                                                                              <---------ANAC58   ====                                                                              <---------ANAC58   ----                      <----------DOF2                    <---------DAG2  <---------ICU4============== ---------YAB1 ------>ZmHOX2a(2)                 ---------->DOF2     <---------YAB1 <---------MYB46(3) --AHL20(2)  <---------ARR11(3)           --------->YAB1 <----------DOF2<---------YAB1 <----------DOF2   tgataattctctcttgatctatctctttttttgtgaagaagtattgataactaaagatgctttttgtttatatgattatttcttggttgttttaaggttt  18439200  Previous    Next  AGI:  At3g49690.1    Description:  ATMYB84/MYB84/RAX3 (myb domain protein 84); DNA binding / transcription factor. Identical to Protein REGULATOR OF AXILLARY MERISTEMS 3 (RAX3) [Arabidopsis Thaliana] (GB:Q9M2Y9;GB:A5YZ78;GB:A5YZ81;GB:A5YZ92;GB:A5YZ97); similar to MYB68 (myb domain protein 68), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70108.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain Range:  from: 18438720    to: 18440186    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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