Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------TOE2(3)                                                              <---------ANAC55(2)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                  --------->ATHB12                                                 --------->ICU4                                                 <---------YAB1     <-----------GT1                         --------->At5g28300           <----------DOF2 ----------DOF2    <---------ANAC46         ----------->GT1   --------->ANAC55(2) -->ZAT6      <---------ANAC58             <---------DEAR3(1) <---------ANAC46 -At5g28300   <---------ANAC58       --------->ANAC58        <---------LBD16              ------>ZmHOX2a(1) --GT1        <---------ANAC46       --------->ANAC58       --------->MYB52(1)        <-----------HVH21   tactttgatacctcttgcgttttgtgttctccattagacacgaagacggtgaagattgggaattacggattgtagggcttttagtctccgtcctctcaaa  18402000                                                        <---------ZAT14                                                        --------->ZAT14                                                        --------->ARR14(2)                                                   <---------ANAC46                                              <---------ANAC58                                              <---------ANAC58                                        <---------TOE2(3)                             --------->ARR11(3)      --------->REM1(2)                 <---------TOE1(3)      ----------->GT1        <---------ARR14(3)    --------->LBD16                     <---------YAB1  <---------ARR14(2)            --------->ARR14(3)   <---------ANAC58                   --------->YAB1  --------->REM1(2)               <---------ARR11(3)   --------->ANAC55(2)               --------->ICU4<---------ANAC58                 ----------->ARR10   <---------ANAC55(1)               <---------YAB1<---------ANAC55(2)     --------->ANAC58   <---------ANAC46              --------->TOE2(3) <---------ANAC58        --------->ANAC46   <---------ANAC58             ----------->GT1<-----------HVH21           --------->ANAC58      <---   ctcatccgtgttgaagagcgatgaagaagtagaaacgttattatggtttcgtcgcgtgtatactctagtaaaaaaacactcaagggaagaccttggtttt  18402100                                                           <------MYB46(1)                  <--------                                                           <---------MYB46(3)               ---------                                                           <------MYB83                <---------TOE1(1)                      ------>ZmHOX2a(2)                   <---------AtMYB61           --------->SPL7          ------>ZmHOX2a(2)--------->ALFIN1 --------->ANAC46                  =======================    <---------At4g35610  --------->O2<-----------GT1     <--------P   <------ZmHOX2a(1)<---------TOE2(1)    --------->At4g35610  <---------O2--------->ZAT6    --------->ALFIN1       ------>ZmHOX2a(2) ----- --------RAV1(1)  <---------YAB1 <----------DOF2 ---------->DOF2      ===============HOX2a_HOX2a=====   tgtgggagatgatccaagtgatgatccaagtggctcttttcactaccctcaaaaagagtgttggtttttgtaggagatgatccaagagtacgacgttcct  18402200                       --------->CCA1(2)                      --------->ARR11(3)                      --------->ARR14(2)                      <---------ARR14(2)                      <---------ARR11(3)                      --------->AGP1                     --------->GLK1(1)                  --------->ANAC58                  --------->O2                  --------->ANAC58                  --------->ANAC46             ------>MYB46(1)             ------>MYB83                                                                   ---------           <---------MYB111(1)                                                             <---------KAN4(1)     --------->ANAC55(2)                                                                   <---------GLK1(1)     <---------ANAC55(2)--------->MYB46(3)                       ----------->RAV1(2)       <--------- -ARR14(2) <---------MYB59  --------->AtMYB61                 <<<<<<<<<TBF1               <---------ARR14(2) >ARR14(2) <---------MYB46(2)          ------->TEIL        <<<<<<<<<TBF1                  --------->ARR14(2) ==HOX2a_HOX2a --------->MYB46(3)     <---------GLK1(2) <<<<<<<<<TBF1           <---------ANAC58 ->ZmHOX2a(1)-------->P<------ZmHOX2a(2)          <----------DOF2<---------At4g35610 <----------DOF2 =============================HOX2a_HOX2a  <------------------------ANAC81      <---------ANAC58   cttgatcacataacctacccacgagatccaccaaaatactgaatctcgtcttcttttcttcttcttcttctgagacactcttgcggtctttggatattcc  18402300                                                                                      --------->ATHB12                                                                                      <---------ICU4                                                                   <---------ZAT2    --------->ICU4                            ------>NtERF2                          --------->ZAT2    <---------YAB1                            --------->LBD16           --------->ARR14(2)           --------->YAB1                           --------->ANAC46           <---------ARR14(2)           <---------ICU4                          <---------LBD16            <---------CCA1(2)            <---------YAB1                     <----------DOF2                 --------->GLK1(1)            --------->ICU4                     <---------DAG2          ----------->HVH21  --------->LBD16 --------->YAB1               <---------ARR14(2)          --------->ANAC46    --------->ANAC46 <---------ICU4  <----------DOF2  --------->At4g35610     --------->ANAC55(2)<---------LBD16  <---------YAB1 >KAN4(2)      --------->ARR14(2)    <---------ANAC55(2)  ------>ZmHOX2a(1)   --------->ARR11(3) -TaMYB80     <---------GLK1(1)   <---------ATHB12   <---------GLK1(1)        <---------ARR11(3)-----   ttctctttcatatagcatatcagctttatccgccaaatcacttaaacgtgaccacatatccttccccgcagcatcgagatgatcatgatgatttctattc  18402400                                             --------->ANAC58                                             --------->ANAC58                                         --------->AHL20(2)                                         <---------AHL20(2)                                     --------->AHL20(2)                                <---------TOE1(3)                                   ----------->GT1                                     <---------YAB1                                  --------->DAG2                                <-----------GT1                                 ---------->DOF2                        <---------At4g35610     ------>ZmHOX2a(2)        <------ZmHOX2a(1)                         --------->At4g35610     ================================HOX2a_HOX2a         <---------YAB1 --------->GLK1(1) <---------YAB1             ----------->GT1  --------->ANAC46           <---------GLK1(1) ---->ATHB12    XXXXXXXXXXXXXXXXXXXX>MIR390A/B ---------->DOF2        <------ZmHOX2a(1)<---------TOE2(3)   attgtgatcgaacagaaaactcaagagggagaggaaaaagtaattaaacgaaagagctcataaatgtagttaggagctccatttacattatggttttttg  18402500                                                                        --------->ARR11(3)                                                            <---------AHL20(2)                                                        --------->CCA1(2)             --------->TOE2(3)                         --------->ARR11(3)           --------->MYB52(1)        <----------DOF2   <---------ARR11(3)         <------------MYB.PH3(2)  <-----------GT1 --------->YAB1        <---------ARR11(3)         <---------MYB59     --------->AHL20(2)  <---------YAB1         <-----------ARR10        ----         <---------MYB52(2)----------->GT1   --------->ARR11(3)        --------->CCA1(1)     <-------       <-----------GT1   ---------->DOF2     <---------ARR11(3)   --------->YAB1           <---------   tttttcttataactaacttaatttgtgtaaagttaataacttttgaagataatcatagatatataatctcataatatctatccaaataaacttatttata  18402600                        --------->ANAC58                                          <---------ARR11(3)                  --------->TOE1(3)                                               --------->ARR11(3)  <---------MYB52(1)    --------->ANAC58                ------>MYB83--------->ANAC58 --------->At5g28300    --------->ANAC46      ----------->GT1       --------->ANAC58 <-----------HVH21--------->TOE2(3)           --------->YAB1        --------->ANAC46 ----->ANAC46  --------->GLK1(1)        --------->TOE2(3)         --------->MYB52(1) --AHL20(2) ------->GAMYB            ----------->RAV1(1)------>MYB46(1)          <---------CCA1(2) --TBP   ----------->RAV1(1)      ------>ZmHOX2a(2) ------------------------>ANAC81   caccgttacttcaacagaaaccctaaacgaaactgatcccaacataaatgataaaaccaaacaaaaaaaaacgaaacaagaacatatctcagatttaaaa  18402700                                                      <---------ICU4                                                      --------->ATHB51                                                      --------->AHL20(2)                                                     --------->AHL20(2)                                                     <---------AHL20(1)                                                     <---------AHL20(2)                                                  --------->AHL20(2)                                              <----------DOF2                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                            <---------RVE1(1)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           <---------ARR11(3)               --------->WOX13(1)          <---------ARR14(3)              <<<<<<<<<WRKY18              --------->ARR11(3)                                 -------            --------->TOE2(3)              --------->ARR14(3)                               <--------         <---------ARR14(2)               --------->RVE1(1)                               <----------         --------->ARR14(2)        <---------ZAT6--------->AHL20(2)                 --------->TOE2(3)         --------->GLK1(2)         ----------->GT1<---------AHL20(2)                --------->TOE1(3)  --------->ALFIN1  --------->At4g35610---------->DOF2<---------AHL20(2)         <-----------GT1   ccaagtgtgagaatcgtcaatgagcttaggcccaatacagttaaagatcttttaaattatttcagggccatcaaatttgattttaaccttagacagtacg  18402800                                                                                         <---------YAB1                                                   <---------MYB52(2)         --------->ANAC58                                                  --------->ANAC55(2)         --------->TGA1a                                                  --------->ANAC58            <---------TGA1a                                                  --------->ANAC58            --------->ANAC46                                                  ----------->GT1             --------->ANAC58                                                  --------->ANAC55(1)      --------->TOE1(2)                                           --------->ZAT2                 --------->ANAC58                                  --------->AHL20(2)   --------->ICU4     --------->ANAC46                                  --------->YAB1  --------->ANAC46 <---------YAB1      <---------ICU4                               --------->WOX13(1) <---------ANAC55(2)     --------->ANAC58 -->SPL7             <----------ID1       --------->ANAC58      --------->ARR14(2)     --------->YAB1 -SPL7 ----------->GT1   ---------->DOF2  --------->ANAC46      <---------ARR14(2)    <---------ATHB51 -----AtSPL3      --------->At4g35610     --------->ANAC58    <---------MYB46(3)      --------->ICU4   accagtatcgagttaatatcagaagaacaaagtcaattatatccaagctaacaagtaacaattgtggttctgataaacgcacgagacaattatgaatggt  18402900  Previous    Next  AGI:  At3g49610.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G24050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61307.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Protein of unknown function DUF313 (InterPro:IPR005508) Range:  from: 18401398    to: 18402402    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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