Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->WRKY18(1)                                                                        <---------At5g28300                                                                       <---------DOF5.7(2)                                          --------->YAB1             --------->DOF5.7(2)                                     ------>ZmHOX2a(1)          ----------->HVH21                                    --------->TOE2(3)           ----------->TGA1                    <                                 --------->ARR14(2)           <---------At4g35610                   <            <---------KAN4(2)    <---------ARR14(2)          --------->GLK1(2) --------->AtLEC2------        --------->YAB1      --------->ANAC58                 ------->TEIL  <-----------HVH21 <------- -------->TOE2(3)           --------->ANAC58     --------->ANAC58  <---------ANAC46          <------- -------->YAB1           --------->At4g35610     --------->ANAC58 <---------TOE2(3)    --------->YAB1   aatctcaatatcagaataaccctgatcagcaagcttatcctcaagaatagcaagcttaagatgaatctgacgtttacggtcatgctcaaggatagcttta  18400100     <---------ANAC46              --------->TOE2(3) ---------ANAC58            --------->REM1(1)                     --------->MYB46(3) ---------ANAC58            --------->YAB1                    <---------ANAC58 --->ATHB12              --------->TOE2(3)       <---------ALFIN1-------->P ---DOF2          --------->At4g35610      <---------DAG2     <---------ANAC58 --DAG2          ----------->RAV1(1)------>ZmHOX2a(1)<----------DOF2        --------->HSFB2a(2)   ttgggtttcttagataaaccagcagtaccttcatcatcctcaaaacctttcccacctttaacaggcttaccaccatttctaggtctcacaaaaaacttat  18400200                                                                                 ------>MYB83                                                                                 ------>MYB46(1)                                                                                 -------->P                                                                               <---------MYB59                            ------>ZmHOX2a(1)                                  --------->AtMYB61                          ------>ZmHOX2a(2)                                    <---------MYB46(2)                        <---------ARR14(2)           <---------MYB52(1)        <---------MYB111(2)                        --------->ARR14(2)          <-------GAMYB              --------->MYB46(3)                      ------>ZmHOX2a(1)            <---------ANAC58         <-----------GT1      ----                    ----------->RAV1(2)            <---------ANAC58 --------->ZAT6        -----------              <---------MYB52(1)           --------->ZAT6  <---------ARR11(3)  <---------MYB111(1)---   tcgtctgaacataaccattagttcctgatcctcttgctgtctgtaaccctattccgttgtacatctttcaactctaatttaccaaccctgaatcgaaaaa  18400300                                        --------->ETT(2)                                        <---------ETT(2)                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->AGP1                                  <---------ARR14(2)                ------>MYB46(1)                                  <---------AGP1            --------->ANAC58                       --                                  --------->ARR11(3)        --------->ANAC58                       --                                  --------->ARR14(2)        --------->ANAC46                     ---- ------>DOF2          <-------TEIL<---------ARR11(3)  --------->TOE1(3)               ------>MYB83 -- >GT1       <---------ANAC58    ----------->ARR10     --------->TOE2(3)<-----------GT1------>MYB46(1) ------>DAG2<---------ANAC58  ---------->DOF2 ---------->DOF2       ------>MYB83      --------->MYB52(1)   aaagcgaagagattgggtttcagattcaaatcgaaagatctgtcgatacaaagaaaccctaaacgaaaccaaatcacagtatgaaaccaaacagaaacta  18400400                                                                                             --------                                                                                             --------                                                                                            ---------         ------>ZmHOX2a(2)                                                                  ---------        <------ZmHOX2a(2)                                                                 <---------SPL7       --------->AGP1                                                                    <---------ANAC58       <---------ARR14(2)                                                                <---------ANAC46       --------->ARR11(3)                                                                <---------ANAC58       <---------AGP1                                                                   <-------TEIL       <---------ARR11(3)                                                               <------------       --------->ARR14(2)                               <---------ANAC46                -------------  --------->MYB52(1)                        <-----------GT1                            <-------------  ----------->RAV1(1)                    <---------ICU4<------NtERF2                <---------DEAR3(1) ------->ANAC58                     >>>>>>>>>MYB2    <---------bZIP60(1)       --------->GLK1(2) ------->ANAC58               --------->ANAC58       --------->bZIP60(1)       --------->ARR14(2) ------>DOF2                  --------->ANAC58<---------YAB1                   <---------ARR14(2) ------->ANAC46      ------------------------>ANAC81 <---------ANAC46         <---------GLK1(2)   aaagcaacagatcttagattgaagtggaaaacaaggaaaaccaaaattaccagtgtcgtcgtgtttgagagaagatgagagaatcgtcgatgcgtacgga  18400500                                           ----------->GT1                                          <------ZmHOX2a(1)                                   ------->GAMYB                                  --------->ANAC58 ->ANAC58                        ------>MYB83 <-----------GT1 ->ANAC58                        ------>MYB46(1) >SPL7<------ZmHOX2a(1)        --------->AtMYB61                ------------>CBF >SPL1(2)--------->ATERF1(1)  --------->DEAR3(2)            --------->ANAC46 ---AtSPL3                    --------->MYB46(3) *TSS       <---------ALFIN1          <---------AHL20(2) -->AtSPL3         --------->LBD16--------->ANAC58     <-----------GT1              <---------YAB1  - -----SPL14      <---------LBD16--------->MYB52(1)  --------->AHL20(2)           --------->ICU4    --   ctctcagaggagacgacgatgcggaagatagaaccaacggaagaggagtaacaattttttccccacaacaatgtctgtctataagtattatatgggctta  18400600                            <---------------AGL15                            ------------>CBF                            ----------------->AGL1                           ----------------->AGL2                           <-----------------AG                           <-----------------AGL1                     <---------WRKY38(1)                                                   <------MYB46(1)                     <---------WRKY12                                                      <------MYB83                    --------->WRKY18(1)                                                   <---------MYB46(3)                    <<<<<<<<<<WRKY18                      <---------YAB1                  --------->MYB111(1)                    <<<<<<<<<<WRKY62                   <---------AHL20(2)                 --------->MYB46(2)                    <<<<<<<<<<WRKY40                   --------->AHL20(2)                 -----------                  <------MYB46(1)                 --------->AHL20(2)                      <---------AtMYB61              <-----------RAV1(1)  ----------->GT1<---------AHL20(2)                      <----------             <---------TOE2(3)    <---------YAB1 --------->AHL20(2)                --------->DAG2       ----------->GT1---------->DOF2    <---------At4g35610      --------->ARR11(3)      --------->MYB59 ----------->CBF  <------MYB83    <---------TOE2(3)   --------->AHL20(2)          ---------->DOF2   < --------------->AGL2<---------WRKY45 ---------->DOF2 <---------AHL20(2)     ----------->RAV1(1)   --   ggcccaatatggttttatgttggtcaaaggcccaatatggttaagcggctatttaattttattcttgagaacttgttggcaacaaaaagggtttggtact  18400700                                                       ---------->DOF2 ---->AtSPL8                                       <---------ZAT18                               <--- -----AtSPL8                                       <---------ZAT14         --------->MYB52(2)    ---- ---------AHL20(2)                                 --------->ZAT14     <---------ZAT6     --------->ARR11(3) ------->YAB1                              <<<<<<<<<TBF1              >>>>>>>>>TAC1       <---------ARR11(3)   attaaaactctgatgttctcttggtttttgaacagaacaatgttcttcttctctgcacaaagaacaatctcgagtgttagttatctcatcaagatgttct  18400800                          --------->GLK1(2)                                                  --------                         <---------GLK1(2)                                            <---------ANAC46             <---------ANAC46                                    <---------ARR11(3)   --------->ALFIN1             <---------ANAC55(2)                                 --------->ARR14(2) <---------ANAC46             <------MYB83<---------GLK1(1)                       <---------ARR11(1) <---------ANAC58             <------MYB46(1)                               <-----------GT1  <<<<<<<<<<<<<<<<<LFY ------ZAT14--------->MYB46(2)               <---------ALFIN1    <---------ARR14(2) <---------ANAC58 ----->ZAT14--------->MYB59                 <---------At4g35610 <---------CCA1(2)--------->ALFIN1 ---   atactgaggcaaattaggtgaagtagggaatctcagtaaattttgcagcacttgatagttatctccatatctgtttcatcacagtggtgtgtgtaacaaa  18400900                                 <-------MYC3                                 <-------MYC2                                 ------->MYC3                                 ------->MYC2                           --------->ANAC58                                 <-------MYC4                           --------->ANAC46                                 ------->MYC4                           --------->ANAC58                                --------->O2                    --------->AHL20(1)                                <---------ANAC55(2)      ---------->DOF2--------->AtLEC2                                =======================bZIP_DOF <---------AHL20(2)                                =======================bZIP_DOF <---------AHL20(1)                                --------->ANAC55(2)  <<<<<<<ZML2--------->AHL20(2)                                <---------TGA1a   <---------HSFB2a(2) <---------ANAC58                                --------->TGA1a   --------->HSFB2a(2) <---------ANAC58                                <---------O2---------->DOF2    --------->AHL20(2)                   - ->MYB46(3)                    <-----------------------TaNAC69(2)   <-----------GT1           <------ ------>YAB1           ------->TEIL      --------->TOE2(3) --------->ICU4                     <------   tgaaaatgtttcaagtcccatactgaatctaaacacgtgttaacatcaaagtctagaactaaagattatattacatgccaaacaaacaaaaacatgtctt  18401000  Previous    Next  AGI:  At3g49601.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43996.1); contains InterPro domain mRNA splicing factor, Cwf21 (InterPro:IPR013170) Range:  from: 18398287    to: 18400549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version