Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->HSFB2a(1)                                                               --------->HSFC1(2)                                                               <---------HSFC1(2)                                                               <---------HSFB2a(1)                                 <------MYB46(1)        ----------->RAV1(1)                                 <------MYB83          <---------ALFIN1                                --------->MYB59       --------->MYB46(3)                             <-------GAMYB          --------->AtMYB61                            --------->ALFIN1        --------->ANAC46                        <---------ANAC58            <---------ALFIN1                        <---------ANAC58           --------->MYB46(3)                        <---------ANAC46       <-----------HVH21     --------->LBD16    <----------DOF2    <---------LBD16   <---------ICU4--------->AtMYB61    --------->MYB46(3)  -----   tctggtctttgtctcttgtttttgtttcgggtgttaggtctactcattgtgtcaccaccaccagaaatttccccagtaacaatcgaaaaccctagaaata  18397700                                                                            ----------->GT1                                               --------->ARR11(3)           --------->ANAC58                                               --------->AHL20(1)           --------->ANAC58                                               <---------AHL20(1)     --------->ICU4              ---                                        --------->MYB52(1)         <---------ARR11(3)      ------>MYB83                           --------->YAB1<---------TOE2(3)         --------->AHL20(2)      ------>MYB46(1)          ----------->RAV1(1)<---------YAB1    <---------ARR11(3)--------->ANAC58        --------->TOE2(3) ---->MYB52(1)       --------->ZAT6<---------YAB1                --------->ANAC58        <---------MYB59   acgaaaacacagcaacattgttaacacaattttgattccgattaacgaaaatatttggaacaagaacaagaaattatcaagaaaaaaaaaacctaatcga  18397800                               ----------->GT1                               <---------ZAT6                              <---------TOE1(3)                             --------->YAB1                         <---------ARR14(2)                   --------->HSFB2a(2)                         --------->GLK1(2)                    <---------HSFB2a(2)                         <---------ARR11(1)                 <------ZmHOX2a(2)                         <-----------ARR10                 <---------ARR14(2)        --------->MYB52(1)                         --------->ARR14(2)                --------->ARR14(2)       <-----------GT1                         ------->TEIL                      --------->AGP1----------->GT1                        <---------ARR14(1)   <---------At4g35610 ---------->DOF2<---------AHL20(2) ------->DOF2 --------->At4g35610   <-----------GT1    ----------------->AGL2  --------->AHL20(2) <--   aaatgccaactcaaggagatgaaatcgaatctagggttaaacaattcagcatcgaaacccagatcgagaaaggaacagtgataaaattaccgaagaaatt  18397900                                                          <---------ARR14(2)                                                          --------->GLK1(2)                                                         <---------GLK1(2)                 ---------->DOF2                  --------->TOE1(2)                               ---           ----------->GT1                       ----------->RAV1(2)                              ---       ----------->GT1                          --------->MYB52(1)   ---------->DOF2      --------->At4g35610    --------->MYB52(1)   ---------->DOF2        ------->TEIL    ---------->DOF2          <---------ARR11(3) --------ID1  --------->AHL20(2)           ---------->DOF2--------->ARR14(2)             --------->ARR11(3)   acaacaaaacggagaataaaaaagagagaaagagcgaagaagagagaaagtacctgagagaatctacaaagaaaagtttagcaagtagagagagcttcac  18398000                                                                         <---------ANAC58                                                                         <---------ANAC58                                   ---------->ID1           <----------DOF2                               ------>ZmHOX2a(1)         <---------ARR11(3)                  <------- ------>ANAC58           <-----------GT1        <---------ALFIN1      <-----------GT1       <-------- ------>ANAC58        <----------DOF2    <<<<<<<<<TBF1   --------->ARR11(3)              <-----------GT1   aagctcaaacttctccgtcttcttcttttactccttcgtcttcttcttctccacagcgaaatcttttttttttttccttgttaattctatttcacctttt  18398100                                                                                                <----                                                                                            ---------                                                                                            <--------                                                                   ----------->GT1       --------->ARR11(3)                                                                 <------------CBF      ----------->ARR10                                                               --------->AHL20(1)      <---------TOE2(3)                                                   --------->ARR11(3)           <---------MYB52(2)      <----------DOF2 --------->LBD16              <---------ARR11(3)     --------->YAB1 <---------ARR11(3) <-----------GT1   --------->SPL7          ----------->TBP     --------->AHL20(2) --------->MYB52(1) ---DOF2     *TSS<-----------HVH21       --------->AHL20(2)    <---------AHL20(2)------->GAMYB <----- -DAG2<---------MYB52(1)<---------ZAT18<---------GLK1(2)      --------->AHL20(2)<---------MYB46(2)   tttttgccctttgttctctcgtcccgcgctctcttatttcagattatataaaacatcttaagaaaaaaattgaaaatcatcaactaactaagattttatt  18398200        <---------TOE1(2)        <---------TOE2(2)     <---------ANAC46                                 --------->DAG2 -------GT1                                 --------->AHL20(2) >AHL20(2)      <-----------GT1             ---------->DOF2                               <---------ATHB12 -AHL20(2)     <---------CCA1(2)           <---------ATHB12                   --------->AHL20(2) ----YAB1    --------->AHL20(2) --------->GLK1(1)    ---------->DOF2          <---------AHL20(2)   acagttttcgtagatttatatccattttcatgagatttcataccaataaaacccataaagctaattttagatttatgcattaaaatgtcccaataaactc  18398300                                      --------->CCA1(2)              --------->TOE1(3)           <-----------GT1     <---------ANAC46                      --------->TOE2(3)      <---------AHL20(2)    --------->ALFIN1                     --------->WRKY12     --------->AHL20(2)   <---------ZAT2                         ----------->HVH21                  - ----------->GT1        <-----------RAV1(2)                ----------->RAV1(1)                 <-----   gaattgataaaattcaccagaatgagccaggtgttgtgagatttggctacaatctatgagacaacatttgaccttaattaagtctaaaacatcgtttgca  18398400                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                            ---------                                                                                         <---------ATHB12                                                                                        -------->P --                                                                                      --------->MYB46(3)                                                                                   --------->YAB1  --                                   --------->ANAC46                            ======================                                   --------->ANAC58               ---------->DOF2 --------->ICU4  === ---------->GT1     <---------YAB1 --------->ANAC58    --------->TOE2(3)       ====================== ----AtLEC2    --------->YAB1      <----------ID1      --------->TOE1(3)       <------ZmHOX2a(1)  <--   agtagtaaaaaaaacaaggattatgtttgtgacaaacacgacaaaacatttaagaaactttaaacagacaaagatgaaacaggaatcatcaaccatgcga  18398500 ------>ZmHOX2a(2) ------ZmHOX2a(2) ---------GLK1(1) -------->GLK1(1) ------->ARR14(2) --------ARR14(2) --------ARR11(3) --------ARR14(3)                                         --------->ANAC58         <---------ICU4 ----------ARR10                                          --------->ANAC58         --------->YAB1 --------AGP1                <---------ICU4               --------->ANAC46        <---------YAB1 >AtLEC2  --------->O2       --------->MYB52(1)         <-----------GT1         --------->YAB1 ------->GLK1(2)          --------->YAB1             <---------ARR14(2)         <---------ICU4     -- ------->ARR11(3)         <---------ICU4             --------->ARR14(2)        <---------YAB1   ----- =======HOX2a_HOX2a      <---------YAB1       <---------ANAC58               --------->YAB1   ------>ZmHOX2a(1) ======================HOX2a_HOX2a            <---------ANAC58         --------->ZAT6        <------- ======HOX2a_HOX2a     --------->YAB1        <---------ZAT2       <---------At4g35610        <------- ----ZmHOX2a(1) ------>ZmHOX2a(2)            --------->ZAT2       --------->At4g35610   --------->At4g35610   ggatctcttgccacttgatcggctatcatcataacgacttcgacccctgcttgagtattcacgctctctgcttactctatcatcatcatcatcttcctta  18398600  Previous    Next  AGI:  At3g49600.1    Description:  UBP26 (ubiquitin-specific protease 26); ubiquitin-specific protease. Identical to Ubiquitin carboxyl-terminal hydrolase 26 (UBP26) [Arabidopsis Thaliana] (GB:Q9SCJ9;GB:Q9FPS1); similar to UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) [Arabidopsis thaliana] (TAIR:AT5G06600.3); similar to UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G06600.1); similar to UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G06600.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44000.1); similar to Ubiquitin carboxyl-terminal hydrolase 26 (Ubiquitin thi Range:  from: 18391534    to: 18398113    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g49601.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43996.1); contains InterPro domain mRNA splicing factor, Cwf21 (InterPro:IPR013170) Range:  from: 18398287    to: 18400549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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