Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                       --------->ARR11(3)                      <-----                                                       <---------ARR11(3)                  <---------                                             ----------->GT1                <---------WRKY38(1)<-----                                             --------->ALFIN1               <---------WRKY12   <-----                                          --------->DAG2                   --------->WRKY18(1) ------            <---------YAB1       ----------->GT1      <------ZmHOX2a(1) --------->MYB59 <---------At5g28300   <---------YAB1       ------>ZmHOX2a(1)---------->DOF2<------ZmHOX2a(2)<---------bZIP60(1)<--------   ggattttgattcttgtaatagtcttcctcttcatattgtaacaaaaagtgtagaaaggatcatataactcgagtgaggtcaacacaatctcaccgttacg  18346900       <<<<<<<GRF7     ------>ZmHOX2a(1)   <---------ICU4 ----ANAC58 ----ANAC55(1)           --------->ICU4                 <---------ANAC55(2) --HVH21 --------->WOX13(1)                             --------->ANAC55(2) ----ANAC55(2)      ----------->GT1                  <------NtERF2 ----ANAC58      -------->P                    ---------->DOF2                    ------>ZmHOX2a(1) --->ANAC55(2)<---------MYB52(2)              ---------->DOF2                    --------->TOE2(3) -MYB52(1) <---------ATHB12                ----------->RAV1(1)     --------->ANAC46        --------->At4g35610   agtcatcctgacaatcactaaccagtaattttcaactaaactctcccacaaaggcggtatgtaatgtctccaccatttatgttcctcaacatcatctaaa  18347000                                                                    <-----------GT1                                                               ------>MYB46(1)                                                             <---------MYB111(1)                                                             <---------MYB46(2)                                                             <---------MYB59                                                            --------->ANAC58                       <-                         <---------HSFB2a(2)                --------->ANAC58                     ----                         --------->HSFC1(1)                ------->TEIL                      --------                         --------->HSFB2a(2)             <---------ZAT18                     --------             ------->TEIL<---------HSFC1(1)              --------->ZAT18           --------->YAB1----            <---------AtLEC2                   ----------->GT1 ------>MYB83     --------->WOX13(1) --   acccaaaactcaatgcatgtagtcgctctagaaaacataccatctaaatcggtgataagcgcacctaattttaccttgtaatctatcagagtccgaagca  18347100                            --------->YAB1                          <---------YAB1                        -------->ATHB1                        <---------ICU4                        --------->ATHB51                        <--------HAHB4                        -------->HAHB4                     <---------ICU4       ------>ZmHOX2a(2)<---------AHL20(2)     <---------ARR11(3) --------->YAB1     <---------AGP1  <--------HAHB4     --------->ARR14(2)<---------ATHB51     --------->ARR11(3)--------->ICU4     <---------ARR14(2)<---------YAB1                                --------->ZAT18 --------ARR14(2)   <---------YAB1                                   <---------ZAT18 ----->ANAC58       --------->ICU4                              ---------->DOF2                    <- ->ANAC58         --------->YAB1                             <-----------HVH21   --------->At4g35610 ->ANAC58     <---------At4g35610                         ------>MYB83           <---------At4g35610 ----->ANAC58 --------->At4g35610                         ------>MYB46(1)   --------->YAB1<---------ICU4 ------->ARR14(2)<-------TEIL  --------->YAB1           <---------MYB59    <---------YAB1<-------TEIL   agaactggatctggacagcttcataattattaatagtagtaaacttgaacttctcagacctaatgtcaaagcgaactatcatcaactgatattcatttcc  18347200                                                                                          <----------                                                                                      <---------AHL20(1)                                                                                      <---------ICU4                                      <---------ALFIN1              --------->YAB1    --------->AHL20(2)                               <---------ARR14(2)                  <---------ATHB12   <---------AHL20(2)                               --------->ARR14(2)                 --------->ANAC58    <--------ATHB1                              <---------GLK1(1)                   --------->ANAC58    --------->YAB1        --------->YAB1        --------->GLK1(1)                  --------->WOX13(1)  --------->ICU4       <---------YAB1         <---------CCA1(2)                <---------KAN4(2)     <---------YAB1   <----------DOF2    <---------MYB52(1)       <------ZmHOX2a(1)--------->MYB46(3) --------->YAB1 --------CCA1(2)     <-------GAMYB  ----------->RAV1(1) <------ZmHOX2a(1) <---------GLK1(2)   ------>ZmHOX2a(1)   catagctttataatacaaatgcccgttgatgcatatcccaacacatttaggagtatgaggaatggaacaatcaacaaattctccataataattttcctcc  18347300                                    ----------->HVH21                                  <---------ANAC58                                  >>>>>>>>>>WRKY18                                  <---------ANAC58                                <---------WRKY18(1)     <------------CBF                      <----------DOF2      --------->ANAC58                     <---------ANAC58      --------->ANAC46                     <---------ANAC58      --------->ANAC58              <------ZmHOX2a(2)          <       --------->TOE2(3)     <---------ANAC58   <---------ALFIN1     ------>ZmHOX2a(2)        <------ -GT1  --------->TOE1(3)     <---------ANAC58--------->ANAC46 <----------DOF2   --------->ANAC46  <--   attttctaacgtcaaaacttgatgctttcgagcttgacttgacacacacaacaccttgtattgtctttcgatcggatcatacacaaaatagggtttcttt  18347400                 <---------ANAC58                 <---------ANAC58                 <---------ANAC46 <---------ANAC55(2)                                <-----------GT1                 --------->ANAC55(2)                                              <---------ICU4                 <---------ANAC55(1) ------->TEIL               --------->ICU4   <---------YAB1     -       <----------DOF2            --------->ANAC55(2)           <---------YAB1  <----------DOF2   <--      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------ZAT6          <---------CCA1(2)     ---      <---------ANAC58      --------->DAG2<---------ZAT14     --------->YAB1------>ZmHOX2a(1)     ---      <---------ANAC58    ---------->DOF2 --------->ZAT14   --------->ARR11(3) --------->YAB1   <---- ---------AHL20(2) --------->ALFIN1 <-----------GT1 ----------->GT1     --------->GLK1(2)     ------- ----DOF2       <---------TOE2(3)--------->MYB59   <---------TOE1(3)   <---------GLK1(2)     -------- -------YAB1   <-----------GT1   --------------->AtSPL8<-----------TBP--------->At4g35610  ----------   attttagtgctttcatttaacgtgttggaaaaggttatgtactctacagtgctagggttatatatcatgatcagattcctatctttattacatagcaatc  18347500                                                   --------->ALFIN1                                                 --------->TGA1a                                                 <-----------RAV1(1)                                                 --------->O2                                                 <---------O2                                                 <---------TGA1a                                       --------->LBD16                                     --------->TOE1(2)    ------>ZmHOX2a(2)                                     <---------LBD16     <------ZmHOX2a(2)         <------ZmHOX2a(1)           --------->TOE2(2)  <---------ARR14(2)      <------ZmHOX2a(1)             ----------->RAV1(2) --------->ARR14(2)   <-----------RAV1(2)              =========================RAV ---------->HVH21                   <---------ZAT2<-------MYC3 <------NtERF2                    ===== -------At4g35610                 <---------ARR14(2)  <---------ANAC58--------->ANAC58          ----- ------>At4g35610                 --------->ARR14(2)  <---------ANAC58--------->ANAC58          ===== ------>LBD16                    ================================HOX2a_HOX2a                   <----- -----LBD16                    --------->ANAC58 <-------MYC3   <---------At4g35610 <---------ANAC58 -->ARR14(2)    --------->TOE2(3)===============================HOX2a_HOX2a      --------->ARR11(3) ->WOX13(1)     --------->TOE1(3)<------ZmHOX2a(1)------->MYC3 --------->At4g35610 <---------ANAC58 -->CBF <----------ID1         --------->ANAC58 ------->MYC3   <---------ZAT2    <---------ARR11(3)   cgcagacaggaggacaaaccttaaaaaaactgtaaggaacctgggaaacacatgtggcgatcggcagctaaaacggaagacgagttcttgtctagattta  18347600                                          <------MYB46(1)                            <-----------ARR10          <---------ANAC58  --------->ARR14(2)          <---------ANAC46  <---------ARR14(2)          <---------TGA1a<---------O2     --------->At4g35610          --------->O2   <---------TGA1a  <---------ANAC46          =========================bZIP_bZIP          <---------ANAC58 <---------CCA1(2)          <---------O2   --------->ANAC58 <------MYB83                          --------->ANAC58          --------->TGA1a--------->TGA1a  <---------ANAC55(2)                  --------->MYB46(2)       --------->WRKY12  --------->ANAC58--------->MYB111(1)                   --------->MYB59       ----------->HVH21 --------->O2    --------->MYB46(2)                  <---------MYB52(1)     <---------At4g35610 --------->ANAC46--------->MYB59            <-----------HVH21     --------->At4g35610 <---------ANAC55(2)              --------->ZAT18   <-------GAMYB  --------->ATHB12 ==================================bZIP_DOF              --------->ALFIN1  <---------MYB46(3) ----->DOF2              --------->ANAC55(2)  <-----------------------TaNAC69(2)--------->ANAC58 ===================bZIP_DOF------->TEIL --------->MYB111(2)      <---------DEAR3(1)      <---------YAB1 ----AHL20(2)            --------->ANAC55(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->RAV1(1)   aaggctgagttgacgtgaagaagagccacgtatctcaacaagttaggtgaagagaagaagtggacgagccggtgagatggttaggcaacacgatgactgg  18347700                                                                           --------->DAG2                                                                   <---------ANAC46                                                                 <---------ZAT14                        ===================================bZIP_DOF<---------bZIP60(2)                        --------->ANAC58                 ------->MYC3     ---------->DOF2     -------                        --------->TGA1a         ---------->DOF2  --------->ZAT14  ---------->DOF2 ---    <---------ETT(1)    --------->ANAC58  ----------->GT1<-------MYC3----------->GT1     ----------->GT1   tgttttccgacaaatatttgatgctcaagtcagaaaacatagaaatgtaagaaagaccacatgtaagtgaagtggaaaaagtgagaaagggtcgaaaaaa  18347800  Previous    Next  AGI:  At3g49440.1    Description:  F-box family protein-related. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G31470.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 18346700    to: 18347302    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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