Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----              ------>ZmHOX2a(2)                                                              ------>MYB46(1)             --------->At4g35610                                                             ------>MYB83 ------->ARR14(2)                                                                           --------- --------ARR14(2)                           --------->GLK1(2)                          --------->ANAC58 ------->ARR11(3)              <---------------AtSPL8             --------->MYB52(1)   --------->ANAC58 --------ARR11(3)      --------->YAB1 --------->ANAC46      --------->AHL20(2)    <---------ZAT18 ----ZmHOX2a(1)       <---------YAB1--------->REM1(1)       --------->YAB1        --------->ZAT18   - ->ANAC46    <---------At4g35610   <-------TEIL        <---------YAB1  --------->ARR11(3)  --------->AtMYB61   ggattttgaaatttgatctgaattttcataaaacaggtacaccaaaattctgtatttatcaataaaaaaaacagaccttgagagcgaacacgaccaatct  18335100                                                        --------->GLK1(2)                                                       <---------ARR14(2)                                --------->O2           --------->ARR14(2)           <------NtERF2        <---------O2           <---------GLK1(2)        <------NtERF2           --------->ANAC46     --------->LBD16      ---------->CDC5       <<<<<<<<<GATA-2         --------->RAP2.6(2)      <---------DEAR3(1)    <<<<<<<<<GATA-3        <---------LBD16                      --------->AHL20(2) --------->DAG2             <<<<<<<<<GATA-4    ---------->DOF2                <---------ICU4 -----YAB1<-----------HVH21 <<<<<<<<<GATA-1 --------->ANAC58                 <---------YAB1---------- >WOX13(1)------>NtERF2   --------->WOX13(1)--------->ANAC58          ---------->DOF2   <---------AHL20(2) --------->DOF2      <---------YAB1    <-----------RAV1(2)        --------->YAB1       --------->AHL20(2)   gataaagctcggcgtcagagattgtgatcaatccacgagggccagtaggcaaagccggattctgacaattacaaaagtcatcaatacaatttaaaaagac  18335200                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                             <---------GLK1(2)   ----                                                                             <---------ARR11(3) -----                                                                      <---------DEAR3(1)      -------                                                                     <------NtERF2           --------                                                                    ------>NtERF2           ---------                                                                   --------->DEAR3(1)       ---------                                              <---------YAB1       <---------DEAR3(1)       ------>MYB83                                            --------->YAB1        --------->ATERF1(1)       ------>MYB46(1)                --------->MYB52(1)         --------->ICU4       ----------->HVH21     --------->WRKY12         --------->TOE2(3)                 <---------YAB1       --------->DEAR3(1)    --------->WRKY38(1)    --------->DOF5.7(2)                  --------->YAB1        --------->At4g35610    ----------->HVH21   --------->TOE2(3)                    --------->ICU4      <---------At4g35610     --------->At4g35610   <----------DOF2       --------->At4g35610<---------ICU4  --------->ZAT2   --------->ARR11(3)------   --------->TOE1(3)  --------->At4g35610<---------ICU4     --------->At4g35610     <---------At4g35610 >DOF2   --------->TOE1(3)              <---------ATHB12    <---------ZAT2 ----------->ARR10---------   tcaaactttaacctcaaaaaacgaagcagaagaaaacttacaatgatgatgactagatgaccagcagcgacggcgatgagattttccgatgaccaagcga  18335300                                                 <---------bZIP60(1)                                                 --------->DEAR3(1)                                                 --------->bZIP60(2)                                                 --------->bZIP60(1)                                                 --------->ANAC46                                                 --------->ANAC58       --------->ARR14(2)                        --------->ANAC58       <---------ARR14(2)                      <---------ATERF1(1)      <------ZmHOX2a(1)                        ------>NtERF2  <---------MYB52(1)                          ----------->HVH21 -----NtERF2                            ---------->DOF2 --->NtERF2                           --------->LBD16 ------DEAR3(1)                       =====================================HOX2a_HOX2a ----->DEAR3(1)       <-----------GT1 ------>ZmHOX2a(1) ---->ATERF1(1)   <-----------------------TaNAC69(2) ---->HVH21      --------->ZAT14<---------At4g35610 ->DEAR3(2)    <---------------------WRI1--------->ARR14(2)         <------ZmHOX2a(2) >ANAC58       --------->At5g28300  ----------->RAV1(2)            --------->ARR11(3) >ANAC58  ----------->HVH21     --------->HSFB2a(1)        --------->DAG2 --->MYB52(1)<---------DEAR3(1) --------->HSFC1(2)        ---------->DOF2 >ANAC46--------->CCA1(2)       <---------HSFC1(2)------>NtERF2    <---------ARR11(3)  ----------->GT1   cggcgttaggatacgacggtgaagtaaccagtgaagcttcctgaaaccgcgacgccatcaaaaagtgaagatcaacttagaattttggagggaaaataaa  18335400                                                                                                    <                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                            ---------                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR11(3)                                                                                        <---------ARR14(2)                                                                                        --------->AGP1                                                           --------------------->WRI1   <---------GLK1(2)                                                          --------->TOE2(3)             --------->ARR11(3)                                                       <---------GLK1(1)              ----------->ARR10                           <---------MYB52(2)          --------->GLK1(1)            ===============HOX2a_HOX2a                         --------->MYB52(1)           --------->ARR14(2)            <------ZmHOX2a(2)                      --------->ANAC58             --------->ANAC58                --------->ARR14(2)                      --------->ANAC58             <---------ANAC55(2)             <---------ARR14(2)                      --------->ANAC46             --------->ANAC58               <---------At4g35610             <----------DOF2                      --------->SPL7                  --------->At4g35610            <---------ANAC58    --------->ICU4    --------->SPL1(2)           <---------ANAC46  <----            <---------ANAC58 --------->MYB52(1) <---------SPL7     *TSS    ----------->HVH21------>ZmHOX2a(1)        <----------DOF2------->GAMYB          <---------------AtSPL3       ----------->TGA1--------->TOE2(3)   acttgctctgctttgcttttgacaacgaaacgaactgatgaagttgattcagtacggaaaccctagttcgaatcgcagtgacgcagatcagatcctcaat  18335500      <---------ANAC58      <---------ANAC58    <-----------GT1 <---------AHL20(2)                                             --------->ATHB12 --------->AHL20(2)                                          <---------At4g35610 ---------AHL20(2)              ------->MYC3              <---------MYB52(1) ------AHL20(2)                 <-------MYC2             <-------GAMYB                          ----- ----->AHL20(2)                 ------->MYC2            <---------MYB46(3)                      <---- ---->ATHB1                 <---------WRKY45            <---------DEAR3(2)                  --------- ----->ATHB51           --------->DAG2                 <---------ANAC46                     --------- -----HAHB4--------->LBD16  <---------WRKY38(1)        <---------At1g77200                  ========= -----ATHB12           ---------->DOF2                <------NtERF2                 ------>ZmHOX2a(1) ---->ICU4<---------HSFB2a(2)   <-------MYC3         <-----------HVH21              <----------DOF2 --->CBF  --------->HSFB2a(2)<---------DOF5.7(2)     ------------>AtMYB77       --------->ARR14(2) -----ATHB51--------->LBD16 <---------WRKY12        --------->ALFIN1            <---------ARR14(2)<--   tatttatttcttcccgagtttaacaaaaagtcaacgtgctcgttttttaaaacggtgtcggttagatgatgggctaagcccaaatccttttgagtccaaa  18335600                               <----------DOF2                            ------>NtERF2                                  ------------>CBF                           <---------RAP2.6(2)                <---------ANAC58                           <---------ANAC46                   <---------ANAC58      <---------------AGL15 ---->ARR14(2)            --------->RAP2.6(3)       <---------AHL20(2)    --------->ANAC58       ---- -----ARR14(2)           --------->MYB52(1)     --------->AHL20(2)        --------->ANAC58      ----- -------->AGL1          ----------->HVH21       <---------AHL20(2)    <---------ANAC58     ---------- -------->AGL3    --------->ANAC58             --------->AHL20(2)     <---------ANAC58     <---------ANAC55(2) ===================================================================================================MADS_MADS -------LBD16     --------->ANAC58        <----------DOF2     <---------ANAC46     ----------------->AGL1   tacggagaccagagttcgaagcgcaagtgacggctttataatctctttatttaataaaacgatgtcgtttttgcttaagcaataggcccaaataagtaaa  18335700                                  <------NtERF2                                 ------>NtERF2                                --------->DEAR3(1)                                <---------DEAR3(1)                               *TSS--------->DEAR3(1)                               <------NtERF2                               --------->ATERF1(1)                              <---------ATERF1(1)                              ------>NtERF2                       --------->ARR14(2)  <------NtERF2                       <---------ARR14(2) --------->HSFB2a(2)                                       -                     --------->AHL20(1)   <---------HSFB2a(2)                       <---------MYB52(1)                     <---------AHL20(1)  --------->ETT(1)                          --------->LBD16  -         <---------TOE1(3)    <-----------HVH21                                  <---------LBD16    =         <---------TOE2(3)   --------->DEAR3(1)                               --------->GLK1(1)     = ----->DAG2          <---------ARR11(3)  <---------LBD16            --------->AHL20(2)          ----- ----->DOF2          --------->ARR11(3)  <---------ANAC46   <---------TOE2(3) <---------GLK1(1) ----- ->GT1  --------->MYB52(1)   <---------DEAR3(1)        --------->GLK1(2) <-------TEIL           <----   aagttcaaattaagggttttgaaaatattcgccgtcgccgatgtcgggaaaccgaagaatttgaggcaaaaaaaattcgtatttccggtgagtctgaagt  18335800                    <----------DOF2                   ------>ZmHOX2a(2)                  ===================================HOX2a_HOX2a        --------->AHL20(2)                                           <------NtERF2        <---------AHL20(2)     <-----------GT1                      ------>NtERF2       <---------YAB1     <---------AHL20(2)               <------NtERF2     --------->YAB1==================================HOX2a_HOX2a    ----------->RAV1(1) ----->ZmHOX2a(1) <------ZmHOX2a(2)                       <---------DEAR3(2) -------->LBD16  <---------ARR14(2)                       ------>NtERF2 =========================HOX2a_HOX2a                    <---------DEAR3(1) ---------->DOF2      ---- ========================HOX2a_HOX2a                   <-----------HVH21   <---------ATHB12      ---- ---->ARR11(3)   --------->ARR11(3)              --------->ZAT6    <----------ID1                <--- ---->ARR14(2)   --------->ARR14(2)           ------>ZmHOX2a(1) --------->DAG2              --------- -----ARR14(2)   <---------ARR11(3)          <---------MYB59  ---------->DOF2<---------------AtSPL8   tcctgaattataaatttccgatctttgttaaattcaccattcgttttcctaactctccgtcggcaaaaggcgacacaatgaagcacatataaaactgaaa  18335900                       <---------YAB1          --------->AHL20(2)         --------->ARR11(3)         <---------AHL20(1)                                                                   -------     <------ZmHOX2a(1)--------->AHL20(2)                           <---------HSFB2a(2)      --------- ----->ARR11(3)       <---------AHL20(2)                           --------->HSFB2a(2) ---------->DOF2 ----->GLK1(2)        <---------AHL20(1)                         <-----------GT1    <---------HSFB2a(2) ------ARR11(3)      --------->YAB1                       <----------DOF2           --------->HSFB2a(2) -->GT1  <---------ARR11(3)                          <-----------GT1               <---------LBD16---   atctataggaatatatatacacattataattctctaattgcattggcattggatttatctctttgttttacagaagagagtaatctctggaaagaatcaa  18336000  Previous    Next  AGI:  At3g49400.1    Description:  transducin family protein / WD-40 repeat family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN71593.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 18330234    to: 18335467    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g49410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46365.1); contains domain GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 (PTHR13230) Range:  from: 18335731    to: 18340176    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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